mRNA_Ecto-sp13_S_contig112.1060.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig112.1060.1
Unique NamemRNA_Ecto-sp13_S_contig112.1060.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 7.000e-122
Identity = 183/220 (83.18%), Postives = 199/220 (90.45%), Query Frame = 3 
Query:   30 MATSQMFLGTAATLIFSSTAFVTPMVVRSAAPASYDSAVKMSAGSDYLATLPGAPFSDGKIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDILG 689
            +A+S MFLGTAATLI SSTAFV PM VRSAAPAS  SA+KMSAGSDY+ATLPGAPF DGKIFDPLEL+ GAEPG+IKLWREAEIKHGRVAMLATVGV+VAEQYHP FMGPDYIGPAV HFQEI+AQFP+FWA+SL GMA IEYNTI KAY EPSP+TGEGGLR+EYSPGDLGFDP  +KPK+   L+KMQTKE+NNGRLAMIGIAGMLVQELVN  DILG
Sbjct:    2 VASSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 3.600e-121
Identity = 187/219 (85.39%), Postives = 199/219 (90.87%), Query Frame = 3 
Query:   33 ATSQMFLGTAATLIFSSTAFVTPMVVRSAAPASYDSAVKMSAGSDYLATLPGAPFSDGKIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDILG 689
            A+S MFLGTAATLI SS AFVTPM VRSAAPAS  SA+KMSAG+DYLATLPGA   +GKIFD LELA GA+PG+IKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAV HFQEITA+FPQFWAYSL GMA IEYNTIKKAY EPSP+TGEGGLR+EYSPGDLGFDPAKIKPK+   L+KMQ KE+NNGRLAMIGI GMLVQELVNGQDILG
Sbjct:    3 ASSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 8.480e-110
Identity = 165/220 (75.00%), Postives = 189/220 (85.91%), Query Frame = 3 
Query:   30 MATSQMFLGTAATLIFSSTAFVTPMVVRSAAPASYDSAVKMSAGSDYLATLPGAPFSDGKIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDILG 689
            M  +Q+FLG+AATLI SSTAFV PM VRSAAPAS  SA+KMSAGSDY+ATLPGAPF DGKIFDPL L+ GA+P DIK WREAEIKHGRVAMLA++GV+VAEQYHP FMGPDYIGPAV HFQEI+AQ+P+FW +SL GMA IEYNTI  A+E PS +TGEGGL+E+Y PGDLGFDP  +KP++   L  M+TKE+NNGRLAMIGIAGMLVQEL+N  DILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 1.580e-108
Identity = 165/219 (75.34%), Postives = 187/219 (85.39%), Query Frame = 3 
Query:   30 MATSQMFLGTAATLIFSSTAFVTPMVVRSAAPASYDSAVKMSAGSDYLATLPGAPFSDGKIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDIL 686
            M  SQMFLGTAA LI SSTAFV P+ VRSAAPAS  SA+KMSAGSDY+ATLPGAPFSDGKIFDPL L+ GA PGDIK WREAEIKHGRVAMLA++G++VAE+YHP FMG D+IGPA+ HFQEI+AQFP+FWA+SL GMA IEYNTI  A++ PS +TGEGGL+E+Y PGDLGFDP  +KP     L  M+TKE+NNGRLAMIGIAGML QELVNGQDIL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.700e-81
Identity = 125/160 (78.12%), Postives = 141/160 (88.12%), Query Frame = 3 
Query:  207 KIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDIL 686
            KIFDPL LA GAE GDIKLWREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAV HFQEI+A+FP+FWA+SL  +ALIEYNTI KAY EPS +TGEGGLR+EYSPGDLGFDP  +KP +   L+ MQTKE+NNGRLAMIGIAG LVQELVN  +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
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BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 3.060e-80
Identity = 139/220 (63.18%), Postives = 156/220 (70.91%), Query Frame = 3 
Query:   30 MATSQMFLGTAATLIFSSTAFVTPMVVRSAAPASYDSAVKMSAGSDYLATLPGAPFSDGKIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDILG 689
            M  SQMF+GTAATLI SSTAFV PM VRS         +KMSAGSDY+ATLPGAPFSDGKIFDPL L+ GA PGDIK WREAEIKHGRVAMLA++GV+VAE                            FWA+SL GMA IEYNTI  A++ PS +TGEGGL+E+Y PGDLGFDP  +KP +   L  M+TKE+NNGRLAMIGIAGML QELVN  DILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 9.880e-80
Identity = 120/161 (74.53%), Postives = 138/161 (85.71%), Query Frame = 3 
Query:  207 KIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDILG 689
            +IFDPL L+ GA PGDIK WREAEIKHGRVAMLA++GV+VAEQYHPFFMGPDYIGPAV HFQEI+AQFP+FWA+SL GMA +EYNTI  A++ PS +TGEGGL+E+Y PGDLGFDP  +KP +   L  M+TKE+NNGRLAMIGIAGML QELVN  DILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.480e-77
Identity = 121/161 (75.16%), Postives = 138/161 (85.71%), Query Frame = 3 
Query:  207 KIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDILG 689
            +IFDPL L+ GA PGDIK WREAEIKHGRVAMLA++GV+VAEQYHPFFMGPDYIGPAV HFQEI+AQFP+FWA+SL GMA IEYNTI  A++ PS +TGEGGL+E+Y PGDLGFDP  +KP +   L  M+TKE+NNGRLAMIGIAGML QELVN  DILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.630e-75
Identity = 126/214 (58.88%), Postives = 160/214 (74.77%), Query Frame = 3 
Query:   51 LGTAATLIFSSTAFVTPM-VVRSAAPASYDSAVKMSAGSDYLATLPGAPFSDGKIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDILG 689
            +G A+    S  AF+ P     SA P S  +A +MSAGSDY++TLPGAPF+DGK++DP+ L+  A+P DIK WREAEIKHGRVAMLA+VGV+VAE +HP F+GPDYIGPA+ HF+EITA+FPQFWA +L  +A +EY  I   + E  P+TGEGG+R +Y PGDLGFDP  + P++   L  M+TKE+N+GRLAMIGI GM+VQELV    I G
Sbjct:   60 VGMASWCFASCEAFIVPTPTTLSARPTS--TAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271
[Close]
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 5.960e-70
Identity = 125/224 (55.80%), Postives = 158/224 (70.54%), Query Frame = 3 
Query:   30 MATSQMFLGTAATLIFSSTAFVTPMVV--RSAAPASYDSAVKMSAGSDYLATLPGAPF---SDGKIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAYEEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLAMIGIAGMLVQELVNGQDIL 686
            M TSQ+FLGTAATLI SS AFV P+     S A  +  S  KM+AGSDY A+LPGAPF   ++GK FDP  LA   +P  IK WREAE+KHGRV+MLA VG++V+E +HP FMGP YIGPAV H Q+I   +P FW  SL  +A IE  TIK A+   SP+TG G L+ EY PGDLGFDP  + PK+    + +Q++E++ GR AMIG+ GM+VQE+V+G+ IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig112.1060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7S1_ECTSI7.000e-12283.18Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S0_ECTSI3.600e-12185.39Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q6_ECTSI8.480e-11075.00Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI1.580e-10875.34Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI1.700e-8178.13Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE3.060e-8063.18LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7S5_ECTSI9.880e-8074.53Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE2.480e-7775.16LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G5B4_ECTSI1.630e-7558.88Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI5.960e-7055.80Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig112contigEcto-sp13_S_contig112:22216..26043 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score367.5
Seed ortholog evalue4.5e-99
Seed eggNOG ortholog2880.D7G7S1
Model size1457
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categorychloroplast
Exons4
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-06_000580.1
Cds size663
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig112.1060.1prot_Ecto-sp13_S_contig112.1060.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig112 22245..25278 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462583.6696694-UTR-Ecto-sp13_S_contig112:22215..222441681462583.6696694-UTR-Ecto-sp13_S_contig112:22215..22244Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig112 22216..22244 +
1681462583.7275932-UTR-Ecto-sp13_S_contig112:25278..260431681462583.7275932-UTR-Ecto-sp13_S_contig112:25278..26043Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig112 25279..26043 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462583.686522-CDS-Ecto-sp13_S_contig112:22244..224241681462583.686522-CDS-Ecto-sp13_S_contig112:22244..22424Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig112 22245..22424 +
1681462583.6983943-CDS-Ecto-sp13_S_contig112:22888..230111681462583.6983943-CDS-Ecto-sp13_S_contig112:22888..23011Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig112 22889..23011 +
1681462583.7116838-CDS-Ecto-sp13_S_contig112:23764..238481681462583.7116838-CDS-Ecto-sp13_S_contig112:23764..23848Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig112 23765..23848 +
1681462583.7195256-CDS-Ecto-sp13_S_contig112:25002..252781681462583.7195256-CDS-Ecto-sp13_S_contig112:25002..25278Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig112 25003..25278 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig112.1060.1

>prot_Ecto-sp13_S_contig112.1060.1 ID=prot_Ecto-sp13_S_contig112.1060.1|Name=mRNA_Ecto-sp13_S_contig112.1060.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
MATSQMFLGTAATLIFSSTAFVTPMVVRSAAPASYDSAVKMSAGSDYLAT
LPGAPFSDGKIFDPLELAVGAEPGDIKLWREAEIKHGRVAMLATVGVVVA
EQYHPFFMGPDYIGPAVGHFQEITAQFPQFWAYSLFGMALIEYNTIKKAY
EEPSPITGEGGLREEYSPGDLGFDPAKIKPKNPVRLKKMQTKEINNGRLA
MIGIAGMLVQELVNGQDILG*
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mRNA from alignment at Ecto-sp13_S_contig112:22216..26043+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig112.1060.1 ID=mRNA_Ecto-sp13_S_contig112.1060.1|Name=mRNA_Ecto-sp13_S_contig112.1060.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3828bp|location=Sequence derived from alignment at Ecto-sp13_S_contig112:22216..26043+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCTTTCCACTCTTTCATCCCCAAACACAATGGCTACCTCCCAGATGTTC
CTCGGCACTGCCGCCACCCTCATCTTCTCCTCAACGGCCTTCGTGACACC
GATGGTCGTGCGATCTGCGGCACCGGCCTCGTATGATTCGGCCGTCAAGA
TGAGCGCTGGATCGGACTACCTTGCCACCTTGCCAGGGGCTCCCTTCTCG
GATGGAAAGGTATGGTACTCAACCCTGAGCCTCTCTACAGCCAGTCAGTC
GGGAATCATGTCTGCCCTGTTGTTGCCTCTGCTACTGCCGTGCAGACGGC
TGGCCCATATCTCCTAGCGAGAGGCCGTGAATGTCCAGACGAAAAAAACG
TGTCTGGTCTGCACGCGCACACGTACATGCACGCGCACGCGTAACAACAC
ACACGCGTTCAGGCACAAGCACACACAGACCAAGATCCGTTTTCTAAAGC
ATGGACATATGTTTGTGTGCATCGTCTCGGACGTGGACCTGTAGTAGTTA
GCACTTCCCTTGAGCATCATACTCTGTACCTCTGCCACGCTTGTTTGAGG
AGTGTCTTGCCTTAGACTATTACCGGCTCGTGAGGTGGCTGTGGGGTGGC
TGCCAACAAGATTCTCCCGCCACCGTTGTGCCGTGCTGGTTCTCGGTGTC
CTTTCGATCGCTGAACCCGCCAGATCTTCGACCCCCTCGAGCTGGCCGTT
GGCGCTGAGCCGGGAGATATCAAGCTCTGGCGCGAGGCCGAGATCAAGCA
CGGACGTGTGGCTATGCTTGCGACGGTTGGCGTCGTTGTGGCCGAGGTAT
GCAAACACACGACGACTGTCGGCTGTTCTTGGCTGACAAAAAGGCACCTC
CCTTCCAATGTAATCTGCCGCTGTGCGTATGTACCTCTTCGGAAAGATAC
AAAAAAAAAAATTGTGTTGGGCCGGGCATTTAGCGTTGACCTCCTTTGTC
AGAATGTGCACCGAAAACGCATGCGCAGCAGGACGGCGCGGAGCGATTGA
GCGTCGATTTCGTGGAATGACATGCGTCTGCACATATACATCCATGATTC
CTGCGTGGATCGCCACCCACTTGTACGGACATCAGAGGCAGCCCATAGAC
ATGAGCGGTGAGTATATTTCCCACTGTCGAAAAGGGCGGTTTTGGAAATA
TCTCATCGAGAGCATTCCTGAGAAGAAGTATCAGTTGGCGCTCGCAATCC
TCTAGTTGTAGTGAAATCACGCTTTGAAAATCGATCGCACCCCTGCGCGC
TGACTCGTAACCTTACGGTATGCATGAACCACTGTATGCGTAGGGAGCAT
GCAATGAGATACCTTTGCGAGTTCAACTCGCAACATACCCGTGCGGTAGA
GCACCACGGGCTTTTACCCCCCTACTCGCTGGCATTGAAGTTGCGTTTTA
TTCTTTACGTTTCGGCATGTTTTCGCGTAAGGAGGTCACGCGGCCTTAAC
CGCCGAAAGGTTCTGTCTTCTGGCATTTGTAGCTCGACAGAGTCGTACCT
TCTCACCCCTTCCCTGCTACACCGTTGCCTCCTCACTCGCAAACTCCAGC
AATACCACCCTTTCTTCATGGGCCCCGACTACATCGGCCCTGCCGTGGGC
CACTTCCAGGAGATCACCGCTCAATTCCCCCAGGTGATCAGGAGTATAAC
CGAAAAAGAGATGCCGCGAATCCACCACACAGGGGCAACCGGTTTGACGC
ACAGATGGAAAGCAGCGTCGTCCATTGATGCTGGACACAGTAGTGCATTG
TTTTCTTTGCAGTCGGATGGATTATTGTTCAGGGTGTCGCTCAGGCGGTG
ACATGGGTACCGTGGTTGCACTCACAAATCGGTCTCTTGTAACGTGAAAA
TTTATGGCGTACGTGATCAACCCGTGGGCATGCAAGCACCTCATGGAGTA
ATGCTGATCTGTGAAGGTATCCCGCCTGCCATGGGTGAAAGATGTACAGT
TTCGTGTTTGCCTCCCGTTGCCACCGATGGATTAATGATATGTTTCCACG
CCTACACTGAGGGCAGGCCATCCCGTTGCACGTCAGAATTTGTCCGAAAC
TGGGCATCGTCGTTGTATCGTCAATAGTACTTTGCAAGTTTCCTCGGACT
TTCAACCGGGATAGATTGGACATGTCTTCCAAAAAATCCAAACTAATGTA
CAAAAATTCGAACACTTTACTGCCGCAAGTACGAGGACCGTTCACGCAGA
AGAGTGAGTAGGACAGAGGGCAGCAGCAGTATCCCACCATGCCTACAGAG
TGGGAAACCACCTTTGTACCTGCCGAGTATGAATAGGTGTGGTGTTTGTT
CGTTCTGCCAATTTTTGTTTGGGTTTTTAGAAGACAAGTCTTCCTCTCTC
TTTCCGCGGGCACAAGAGTCCGGGATGAATAACCAATCAATGCATAGTCT
TTGTCAATTCGTTGGGTTTTTGTATTGCAGAAAAAGTAAAAACTAGACGA
TGGCACAGATAACAGGTTGGTTGACCACGCGACGCTCCAACAATCACACG
CCCGAGCTACATGGTCATTGACCCGTTGCCTTCTCTGGCTTTCGACTCTG
AGCTTTACTGAGCAAGTGGAAACGACAAGTGCGCCCAGCAATGCGGGGTG
GAGTTGGTTGCGTTGCACGGAGCTTCTGTTTCAAAAATCAAGCGCTCTCT
GCTACATGATGCTGGAGCATGCCCGCGGGGATACGCGTGTCTCCGTCGTT
ATGCGTCTTCCGACAAAAAAATGTAACGCCCAGACCCTTGTGCATCCTAC
GCTCACGCCCACGGCCGTGATCGTCTCCAAACCTCAGTTCTGGGCTTACT
CCCTGTTCGGCATGGCCTTGATCGAGTACAACACCATCAAGAAGGCATAT
GAAGAGCCCAGCCCCATTACCGGCGAAGGCGGCCTCAGGGAGGAGTACAG
CCCGGGAGACCTCGGCTTCGACCCCGCCAAGATCAAGCCCAAGAACCCTG
TGCGCCTGAAGAAGATGCAGACCAAGGAGATAAACAACGGGCGCCTCGCC
ATGATCGGCATCGCCGGCATGTTGGTGCAGGAGCTGGTTAACGGGCAGGA
CATCCTCGGTTAAAAGGCATCGGAGGAACGGGGTCGCTTTTGCGGCCAAG
CCTGACCGTTAATCGATCTGTGCATACAAGGGAGACAACGCAACAAGCGT
GCCGCGTACTGCTGCGTTGCATACATACGTGTTCGTTTCCTAAGAAAAAG
AATTAATGAGTGTTAACACTACGCTGGTAATAATAAAACAAGGAAAAAGC
GGATGCGCGTGTGTCTGTTGAATGTATTTTTTCTTTTCAGTACATGGCGA
CCCTCCACATGTAATGAATCCTGAAGAGATCGCGGCTGGTCCTATAGGCT
GGCATGGCGATTTCCATGCGTTCATTTCGTGCATTTCGTTTCGAAAAGAA
GGCACATGTTGCGTCCTTGAAACACACCCGTAGTTAGAAACGTTATTTAC
TCGTGCAGTCCTTGTCGAATGGCATGTCCTGGGTTTTCGCAGTAGGTGCT
TCGGGTGGTGGTGGTGCTGGCAGTAGAAGAAGGGGGCCCAGAAGGCGGAG
GGGTCGTGTTGTCTGACCGGATGCATTTTTGTTAACGTGCCAGCAGACGT
GCGAGATTGTCATACACCCGCTCTGCCTTCTTGTGGGAGACATACAGTAC
AGTATTAAGCCTGATTTAGAATGGATTGTAGCCCGTAGTTCGCACGTGGT
TCCTGCGGCGCGCATTCTACGACAGCGACTAGGACTGACTTGAGTGGTAG
TGTCGCGCCGGAGGGAAATATATGATGAGTGGTGACTGGCGGTGTGGACA
TGTGGAGTTTTCGGGTCTGTCGGGTGAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig112:22216..26043+

>mRNA_Ecto-sp13_S_contig112.1060.1 ID=mRNA_Ecto-sp13_S_contig112.1060.1|Name=mRNA_Ecto-sp13_S_contig112.1060.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=663bp|location=Sequence derived from alignment at Ecto-sp13_S_contig112:22216..26043+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTACCTCCCAGATGTTCCTCGGCACTGCCGCCACCCTCATCTTCTC
CTCAACGGCCTTCGTGACACCGATGGTCGTGCGATCTGCGGCACCGGCCT
CGTATGATTCGGCCGTCAAGATGAGCGCTGGATCGGACTACCTTGCCACC
TTGCCAGGGGCTCCCTTCTCGGATGGAAAGATCTTCGACCCCCTCGAGCT
GGCCGTTGGCGCTGAGCCGGGAGATATCAAGCTCTGGCGCGAGGCCGAGA
TCAAGCACGGACGTGTGGCTATGCTTGCGACGGTTGGCGTCGTTGTGGCC
GAGCAATACCACCCTTTCTTCATGGGCCCCGACTACATCGGCCCTGCCGT
GGGCCACTTCCAGGAGATCACCGCTCAATTCCCCCAGTTCTGGGCTTACT
CCCTGTTCGGCATGGCCTTGATCGAGTACAACACCATCAAGAAGGCATAT
GAAGAGCCCAGCCCCATTACCGGCGAAGGCGGCCTCAGGGAGGAGTACAG
CCCGGGAGACCTCGGCTTCGACCCCGCCAAGATCAAGCCCAAGAACCCTG
TGCGCCTGAAGAAGATGCAGACCAAGGAGATAAACAACGGGCGCCTCGCC
ATGATCGGCATCGCCGGCATGTTGGTGCAGGAGCTGGTTAACGGGCAGGA
CATCCTCGGTTAA
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