mRNA_Ecto-sp13_S_contig1119.1051.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1119.1051.1
Unique NamemRNA_Ecto-sp13_S_contig1119.1051.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: A0A6H5KZB1_9PHAE (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZB1_9PHAE)

HSP 1 Score: 531 bits (1367), Expect = 3.310e-179
Identity = 276/279 (98.92%), Postives = 278/279 (99.64%), Query Frame = 1
Query:   76 MAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            MAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTAL+DNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGT+SSVVYGAMDQEARSIHLDKFRKGK 
Sbjct:    1 MAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALSDNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTASSVVYGAMDQEARSIHLDKFRKGKT 279          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: A0A835Z3G9_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G9_9STRA)

HSP 1 Score: 447 bits (1151), Expect = 6.090e-148
Identity = 223/306 (72.88%), Postives = 256/306 (83.66%), Query Frame = 1
Query:    1 MKPPAKPKV--GSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            M PP K K   G FQ++ L  ++ RG+M MGY+VPTPVQRKSLPVTL   D VVMARTGSGKTAAFLIPVLEKL  HS KMG RS+ILSP+RELA+QTLTF +KM +   LR ALLVGGDSMDKQF ALA+NPD+IIATPGRLMHHLQEVP+FTL++VE++VFDEADRLFEMGFAEQLRE+MR VPE RQ+LLFSATMPKQLVQFARAGL+DPVLIRLD E ++S  L +AFL CRS DK A LLFLLREVIP D MT++F ATRHHAE+LH L+   G  SS++YG MDQEAR  +L+KFR+GKV
Sbjct:    1 MPPPDKKKAKSGGFQSLALSPEVMRGVMLMGYRVPTPVQRKSLPVTLTNVDTVVMARTGSGKTAAFLIPVLEKLKEHSTKMGVRSVILSPSRELALQTLTFVKKMGRFTSLRFALLVGGDSMDKQFEALANNPDVIIATPGRLMHHLQEVPDFTLKAVEIVVFDEADRLFEMGFAEQLREVMRTVPERRQTLLFSATMPKQLVQFARAGLQDPVLIRLDAEQRVSESLRMAFLACRSADKAACLLFLLREVIPRDQMTVIFTATRHHAEYLHALIGATGVESSIIYGTMDQEARKTNLEKFRRGKV 306          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: W7TM98_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM98_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 4.920e-131
Identity = 200/295 (67.80%), Postives = 249/295 (84.41%), Query Frame = 1
Query:   28 GSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            G+FQ++GL +D+F GI  MGYK+PTPVQRKSLP  LAG DVV MARTGSGKTAAFLIPVLEKL SHS ++GAR++ILSPTRELA+QT+ FA+ +S   DLR+ALLVGGDSMD QF AL+ NPDIII TPGR+MHHLQEVP+F+L +V++ VFDEADRLFEMGFAEQ++EI+R +PEERQ+LL+SAT+PK L QFARAGL+DP LIRLDTESK+S +L L+F T RS +K AALLFL+RE++P D +TI+F AT+HH E+L E+  E G   S ++GAMD EAR ++L++FR G+V
Sbjct:  109 GTFQSLGLSKDVFAGINRMGYKLPTPVQRKSLPEALAGKDVVCMARTGSGKTAAFLIPVLEKLQSHSPRVGARALILSPTRELAMQTIKFAKGLSHFTDLRVALLVGGDSMDDQFEALSRNPDIIIGTPGRVMHHLQEVPDFSLAAVQMAVFDEADRLFEMGFAEQIKEILRTMPEERQTLLYSATLPKMLAQFARAGLQDPQLIRLDTESKVSEQLCLSFFTVRSGNKTAALLFLVREILPRDKLTIIFAATKHHVEYLQEVFSEIGLPCSAIFGAMDFEARKLNLERFRHGRV 403          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: A0A8K1CNV6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV6_PYTOL)

HSP 1 Score: 400 bits (1029), Expect = 2.370e-130
Identity = 193/296 (65.20%), Postives = 240/296 (81.08%), Query Frame = 1
Query:   25 VGSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            VG FQ +GL   +FRG+MAMGYKVPTP+QRK+LP+ L+G DVV MARTGSGKTAAFLIP+LEKL  HS K+G R+++LSPTRELAVQTL FA+ ++K   ++++L+VGG+ M+ QF A+A NPD+I+ATPGRLMHHLQE+P+F L+ VE +VFDEADR+FEMGFAEQL+EI++ +P  RQ+LLFSAT+PK LVQFARAGL DP LIRLD E+KIS  L + FLT R+ DKPA  L+++RE IP+DD TIVF ATRHH EFLHE LK     SS+VYG MDQ +R I++ KFR  K 
Sbjct:   33 VGGFQHLGLSPQIFRGVMAMGYKVPTPIQRKTLPIVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSKKIGVRAVVLSPTRELAVQTLRFAKSLAKFTSIKISLIVGGEGMEAQFEAIAANPDVIVATPGRLMHHLQEIPDFNLKVVEYVVFDEADRIFEMGFAEQLQEILKNMPASRQTLLFSATLPKALVQFARAGLNDPELIRLDVENKISENLKMTFLTVRTADKPALFLYMVREFIPKDDQTIVFAATRHHVEFLHEFLKAHHIDSSLVYGEMDQASRKINIGKFRAKKT 328          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: A0A484EF93_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF93_BRELC)

HSP 1 Score: 390 bits (1001), Expect = 1.130e-129
Identity = 192/296 (64.86%), Postives = 237/296 (80.07%), Query Frame = 1
Query:   25 VGSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            VG FQ +GL   +FRG+MAMGYKVPTP+QRKSLP+ L+G D V MARTGSGKTAAFLIP++EKL  H++K+G R+++LSPTRELAVQTL F + +SK   L+MAL+VGG+ MD+QF A+A NPDI+IATPGRLMHHL E+P+F L++VE +VFDEADR+FEMGFAEQL+EI++ +P  RQ+LLFSAT+PK LVQFARAGL DP L+RLD E++IS +L +AF T RS DKPA  L+L+RE +P+DD TIVF ATRHH EFLH LL      +S  YG MDQ +R I L KFR  K 
Sbjct:   35 VGGFQHLGLSPLVFRGVMAMGYKVPTPIQRKSLPIVLSGKDCVAMARTGSGKTAAFLIPMVEKLKEHTNKIGVRAVVLSPTRELAVQTLRFTKLVSKFTTLKMALIVGGEGMDQQFEAIAANPDILIATPGRLMHHLHEIPDFHLQAVEYVVFDEADRMFEMGFAEQLQEILKTMPVHRQTLLFSATLPKGLVQFARAGLNDPELLRLDVENQISEQLKMAFFTVRSGDKPALFLYLVREFLPQDDQTIVFAATRHHVEFLHALLAACHIDASYAYGDMDQASRKIQLGKFRAKKT 330          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: A0A5D6Y2F7_9STRA (RNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2F7_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 7.730e-129
Identity = 195/296 (65.88%), Postives = 239/296 (80.74%), Query Frame = 1
Query:   25 VGSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            VG FQ +GL   +FRG+MAMGYKVPTP+QRKSLP+ L+G DVV MARTGSGKTAAFLIP+LEKL  HS K+G R+++LSPTRELAVQT+ FA  ++K   ++++L+VGG+ M++QF A+A NPD+I+ATPGRLMHHLQE+P+F L+ VE +VFDEADR+FEMGFAEQL+EI++ +PE RQ+LLFSAT+PK LVQFARAGL +P LIRLD E+KIS  L +AF T RS DKPA  L+L+RE IP DD TIVF ATRHH E LHELLK     SS VYG MDQ +R I++ KFR  K 
Sbjct:   39 VGGFQHLGLSPPVFRGVMAMGYKVPTPIQRKSLPIVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSTKVGVRALVLSPTRELAVQTMRFATMLAKFMSIKISLIVGGEGMEQQFEAIAANPDVIVATPGRLMHHLQEIPDFNLKVVEYVVFDEADRIFEMGFAEQLQEILKNMPESRQTLLFSATLPKALVQFARAGLNEPELIRLDVENKISENLKMAFFTVRSGDKPALFLYLVREFIPADDQTIVFAATRHHVELLHELLKANHIDSSCVYGDMDQASRKINIGKFRAKKT 334          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: A0A2D4CBC0_PYTIN (RNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBC0_PYTIN)

HSP 1 Score: 394 bits (1013), Expect = 2.970e-128
Identity = 190/295 (64.41%), Postives = 239/295 (81.02%), Query Frame = 1
Query:   28 GSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            G FQ++GL   +FRG+MAMGYKVPTP+QRK+LP+ L+G DVV MARTGSGKTAAFLIP+LEKL  HS K+G R+++LSPTRELAVQTL FA+ ++K   L+++L+VGG+ M+ QF  +A NPD+++ATPGRLMHHLQE+P+F L++VE +VFDEADR+FEMGFAEQL+EI++ +P  RQ+LLFSAT+PK LVQFARAGL +P LIRLD E+KIS  L + F T RS DKPA  L+++RE+IP DD TIVF ATRHH EFLHELL      SS+VYG MDQ +R I++ KFR  K 
Sbjct:   33 GGFQSLGLSPPIFRGVMAMGYKVPTPIQRKTLPIVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSKKIGVRAVVLSPTRELAVQTLRFAKSLAKFTSLKISLIVGGEGMEAQFEMIAANPDVLVATPGRLMHHLQEIPDFNLQAVEYVVFDEADRIFEMGFAEQLQEILKNMPASRQTLLFSATLPKALVQFARAGLNEPELIRLDVENKISENLKMTFFTVRSGDKPALFLYMVRELIPADDQTIVFAATRHHVEFLHELLAANHIDSSLVYGDMDQASRKINIGKFRAKKT 327          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: D0N6Y7_PHYIT (RNA helicase n=6 Tax=Phytophthora TaxID=4783 RepID=D0N6Y7_PHYIT)

HSP 1 Score: 394 bits (1011), Expect = 6.340e-128
Identity = 192/296 (64.86%), Postives = 238/296 (80.41%), Query Frame = 1
Query:   25 VGSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            VG FQ +GL   +FRG+MAMGYKVPTP+QRKSLP+ L+G D V MARTGSGKTAAFL+P++EKL  HS K+G R+++LSPTRELAVQTL FA+++SK   L+MAL+VGG+ MD+QF A+A NPD+++ATPGRLMH LQE+P+F L++VE +VFDEADR+FEMGFAEQL+EI++ +P  RQ+LLFSAT+PK LVQFARAGL DP LIRLD E+KIS  L +AF T RSLDKPA  L+++RE +P+ D TIVF ATRHH EFLH LL      +S  YG MDQ +R I+L KFR  K 
Sbjct:   35 VGGFQHLGLSPLVFRGVMAMGYKVPTPIQRKSLPIVLSGKDCVAMARTGSGKTAAFLVPMVEKLKEHSTKIGVRAVVLSPTRELAVQTLRFAKQLSKFTSLKMALIVGGEGMDQQFEAIASNPDVLVATPGRLMHLLQEIPDFNLKAVEYVVFDEADRIFEMGFAEQLQEILKNMPTSRQTLLFSATLPKALVQFARAGLSDPELIRLDVENKISENLKMAFFTVRSLDKPALFLYMVREFLPKGDQTIVFAATRHHVEFLHALLAANHIEASCAYGDMDQASRKINLGKFRAKKT 330          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: K3X9Z7_GLOUD (RNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9Z7_GLOUD)

HSP 1 Score: 392 bits (1007), Expect = 6.560e-127
Identity = 193/296 (65.20%), Postives = 238/296 (80.41%), Query Frame = 1
Query:   25 VGSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            VG FQ +GL   +FRG+MAMGYKVPTP+QRKSLP+ L+G DVV MARTGSGKTAAFLIP+LEKL  HS K+G R++ILSPTRELAVQT+ F + ++K   L+++L+VGG+ M++QF A+A NPDII+ATPGRLMHHLQE+P+F L+ VE +VFDEADR+FEMGFAEQL+EI++ +P  RQ+LLFSAT+PK LVQFARAGL +P LIRLD E+KIS  L + F T RS DK A  L+++RE IP+D+ TIVF ATRHH EFLHELLK     SS VYG MDQ +R I++ KFR  K 
Sbjct:   34 VGGFQHLGLSPLVFRGVMAMGYKVPTPIQRKSLPIVLSGKDVVAMARTGSGKTAAFLIPMLEKLKEHSRKIGVRALILSPTRELAVQTMRFTKMLAKFMTLKISLIVGGEGMEQQFEAIAANPDIIVATPGRLMHHLQEIPDFNLKVVEYVVFDEADRIFEMGFAEQLQEILKNMPTSRQTLLFSATLPKALVQFARAGLSEPELIRLDVENKISENLKMTFFTVRSNDKAALFLYMVREFIPKDEQTIVFAATRHHVEFLHELLKANHIESSCVYGDMDQASRKINIGKFRAKKT 329          
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Match: A0A0N7L524_PLAHL (RNA helicase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L524_PLAHL)

HSP 1 Score: 391 bits (1004), Expect = 1.280e-126
Identity = 194/296 (65.54%), Postives = 237/296 (80.07%), Query Frame = 1
Query:   25 VGSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVIPEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFRKGKV 912
            VG FQ +GL   +FRG+MAMGYKVPTP+QRKSLP+ L+G D V MARTGSGKTAAFLIP++EKL  HS K+G R+++LSPTRELAVQTL FA+ +SK   L+MAL+VGG+ MD+QF A+A NPDI+IATPGRLMH LQE+P+F L++VE +VFDEADR+FEMGFAEQL+EI++ +P  RQ+LLFSAT+PK LVQFARAGL +P LIRLD E+KIS  L +AF T RSLDKPA  L+++RE +P+ D TIVF ATRHH EFLH LL      +S  YG MDQ +R I+L KFR  K 
Sbjct:   33 VGGFQHLGLSPLVFRGVMAMGYKVPTPIQRKSLPIVLSGKDCVAMARTGSGKTAAFLIPMVEKLKEHSTKIGVRAVVLSPTRELAVQTLRFAKLLSKFTTLKMALIVGGEGMDQQFEAIAANPDILIATPGRLMHLLQEIPDFNLKAVEYVVFDEADRIFEMGFAEQLQEILKNMPTSRQTLLFSATLPKALVQFARAGLSEPELIRLDVENKISENLKMAFFTVRSLDKPALFLYMVREFLPKGDQTIVFAATRHHVEFLHALLAANHIEASCAYGDMDQASRKINLGKFRAKKT 328          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1119.1051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZB1_9PHAE3.310e-17998.92RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A835Z3G9_9STRA6.090e-14872.88RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TM98_9STRA4.920e-13167.80RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A8K1CNV6_PYTOL2.370e-13065.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484EF93_BRELC1.130e-12964.86Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A5D6Y2F7_9STRA7.730e-12965.88RNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]
A0A2D4CBC0_PYTIN2.970e-12864.41RNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
D0N6Y7_PHYIT6.340e-12864.86RNA helicase n=6 Tax=Phytophthora TaxID=4783 RepID... [more]
K3X9Z7_GLOUD6.560e-12765.20RNA helicase n=1 Tax=Globisporangium ultimum (stra... [more]
A0A0N7L524_PLAHL1.280e-12665.54RNA helicase n=1 Tax=Plasmopara halstedii TaxID=47... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1119contigEcto-sp13_S_contig1119:14042..18556 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score579.3
Seed ortholog evalue1e-162
Seed eggNOG ortholog2880.D7FRK6
Model size927
KEGG koko:K14808
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.ATP-dependent RNA helicase activity
EggNOG OGsCOG0513@1,KOG0337@2759
EC3.6.4.13
Cds size927
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1119.1051.1prot_Ecto-sp13_S_contig1119.1051.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1119 14042..18556 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462582.938452-CDS-Ecto-sp13_S_contig1119:14041..141131681462582.938452-CDS-Ecto-sp13_S_contig1119:14041..14113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1119 14042..14113 +
1681462582.9521284-CDS-Ecto-sp13_S_contig1119:14779..149921681462582.9521284-CDS-Ecto-sp13_S_contig1119:14779..14992Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1119 14780..14992 +
1681462582.9668741-CDS-Ecto-sp13_S_contig1119:15763..159161681462582.9668741-CDS-Ecto-sp13_S_contig1119:15763..15916Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1119 15764..15916 +
1681462582.9783177-CDS-Ecto-sp13_S_contig1119:16623..168651681462582.9783177-CDS-Ecto-sp13_S_contig1119:16623..16865Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1119 16624..16865 +
1681462582.990665-CDS-Ecto-sp13_S_contig1119:17540..176731681462582.990665-CDS-Ecto-sp13_S_contig1119:17540..17673Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1119 17541..17673 +
1681462583.00201-CDS-Ecto-sp13_S_contig1119:18442..185561681462583.00201-CDS-Ecto-sp13_S_contig1119:18442..18556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1119 18443..18556 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1119.1051.1

>prot_Ecto-sp13_S_contig1119.1051.1 ID=prot_Ecto-sp13_S_contig1119.1051.1|Name=mRNA_Ecto-sp13_S_contig1119.1051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=309bp
MKPPAKPKVGSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADV
VVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFA
RKMSKLKDLRMALLVGGDSMDKQFTALADNPDIIIATPGRLMHHLQEVPE
FTLRSVEVLVFDEADRLFEMGFAEQLREIMRGVPEERQSLLFSATMPKQL
VQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAALLFLLREVI
PEDDMTIVFVATRHHAEFLHELLKEAGTSSSVVYGAMDQEARSIHLDKFR
KGKVTRET*
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mRNA from alignment at Ecto-sp13_S_contig1119:14042..18556+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1119.1051.1 ID=mRNA_Ecto-sp13_S_contig1119.1051.1|Name=mRNA_Ecto-sp13_S_contig1119.1051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4515bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1119:14042..18556+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGCCTCCAGCAAAGCCGAAGGTCGGGAGCTTCCAGGCTATGGGGCT CGGCCAGGACCTCTTTCGAGGGGTAAGTGCGGCGTGATAACAGACGATTG GCAGCCGCACACACACGCGACAGCAGTGCGCTGCTGCTCTACTTGTTGAG CTAGACAGCTTGTACGCCTCAGGCCTTAGGGTGCATAACGGTAGTACATG GTGATGAAGGATGGCTCTTAGTCCACTGTAGTTGGGCTATGGGACCGTCA AGAGTCTTGCTGCCTTTCGCAGAAGCGGTGGGGGCCCAGTGAACATGTTG CGGATTTCGCGATCCAAGGCGCGAACAAGGGAAAATGGGACTGCCGCTGC AACTTGATGTGCACAATGCCTCAAGTACTGCGTTGATGGTGAGGAAACAA CCACAAGGAAACGCTTGGGTGCCATTGCACGTTTTACCCTGGCCATCCGG CAGGACTTGTGGCGAGGTGCTGCCTCGCCCAGCCAGCCTAACGGGATGTC CCCTGAAAGTAGTACAACAGTAGACGCCGCTGTCGCCGTTTCATAGTAGA ACCAGCACAGCAGTGGCGCGCGGGGTGGGGAGGGGGGGGAGTTTACGGAC CACCTACGAAGTATACCCCTTGCTTGTATCATGGGAGCTTGTGGACATCA TTCCCATGAGCCCAATCAGCTGTAAACTACGTGAACACCCCCGACTGCGC ACCCCCCCTCCTTGGCACCACCTCCAATTCTCACCCAGATCATGGCCATG GGCTACAAGGTTCCTACTCCCGTGCAGCGGAAGTCTCTCCCCGTCACCCT CGCCGGCGCCGACGTGGTGGTCATGGCAAGGACCGGTTCGGGAAAGACTG CGGCGTTCCTCATCCCGGTGCTGGAGAAGCTCGGCAGCCACAGCCACAAG ATGGGAGCTCGCTCCATAATTCTCTCGCCAACGCGAGAGCTCGCCGTGCA GGTGCGTGGTGTAGATGCCTTTTTGATGCGTTGTGGGAAGAACGCAACGG AGTGCTGCTGCTGCTTGCTCTCCTACCTGACGGCCTGTGTTTGTACAAGA ACGTCCGGCACCTTGTGTTGCTATGAGTAGGTTAAGGTAGGGTTTAAGGG GGTGGGGGCGAGAGAGTGAGGAAGCGGCGTGTTTTTTTTTTTTCTCCAAT CGTTGGACTCTATCGTCTGCCCCTCTGGCCTCTATCCTCCACTTCTACCA GCTAGACGACCCAACCGGGGCCGCATAGGAGGGGGGGGTTGGGCCCCCTC CTGCGGTTCCTGCTTAAGATTTTTTTATTCGCGACTTGTAAAGTCGATCA AGTTTACTAACAACACACTTGGCAGCGCGTAGCTTCCAACGGAGACCAGG ATTTCGTTAGCGAGAAAAAACTAACTCTGTCGGCACCCGAACCCATGACC TGGCCTTTGGTAGGCTGCGAGGTTACCCACTAGACCACCGGAGCGACCGG CGTGTACGTTACCCTGTTCGTAGCAATGGCTGAGCCAATGCCTGCCCTTT GTTGAGAAGACACGGGTGGCCCTCGCTTGATTTCCTTCTTTCCGGGCTTT TCGCGACAAGTTTCGCATCCAGGGTGCATGATCAAGTGCTTCTTTTTTGT TCCTGTACGGTACAGCGGACCTCAGCTCATTCTCGGCCACCTGCGCGCCT GTTGCAGGTTGTTTTTTTCTCAACCCTGCCTTTCCCCCTCTTCCTCTCCC TCGCCCGCCCCCCTTCGTGAAGACGCTGACGTTTGCGCGCAAGATGTCGA AGCTGAAGGACTTGAGGATGGCCCTTCTCGTCGGCGGGGATAGCATGGAC AAGCAGTTCACCGCGCTCGCGGACAACCCGGATATCATCATCGCCACGCC CGGCCGTCTCATGCACCACCTGCAGGTGTGTGAGAGGTCATGAGGAGGAG ACGGCGTTGGTACCTCGGTATTGAGACAGACAGACAGACAGACAGCTGGG TTTGGTTGAGGGTGACGGGGGGCCGGGGGCGAGACGGTGAGGAAGCGGTA TTAACGTTGCCCTGCTCTACTGAGTCCATACGCTCTTGTTGAGGAGACTG AGGTGGCCGTCTCTTGGTTTTTTTACTTCCTCAGTATTGAGATGGAAGGA CAGGAGAGAAGACAGGGAATGATAAGAAGGGCACGGTAGACAAGCCACCA TTGGGGCCTGTCTTGGTCGTGCCCTAGCTATGGGAGCGGTGAAGCTTACC CCCAAGCGACTTGTTGTGTGGCGGGAGCTCTCCGAACTGCCTTGTCTCAC ACGTGTCGCCCGGTCCCGGAGTTCACCTGCACTCAAGCATTTATGCACGT GTCGATTCTCGTTCAAACGTTCGAGTCCACCCTCCGTCTGTTGCAGGAGC GGCACCAAGGTCGTTGTGTTCCAGCATCTTTGCCGCATCCCTCAGCACGA TGTCAGAAAGTCCCACCCTGTTGGCCCGTCCCTTCCGCCCCTAGGTGATC GATCCTGTGGGAACAACGCCCCGTCCTCTCGAAGACGCGTGGTCTCGAGG ATGCGTGGTGTACCAAAGTAAGGCAGGCAAAGCATGAGTACGCCCTTTCT CTCTGCTCGCCTGTTTCGTCCTCGCTCCCCAGGAAGTGCCCGAGTTCACC CTCCGCAGCGTGGAGGTGTTGGTGTTCGACGAGGCCGACAGGCTGTTCGA GATGGGCTTCGCCGAGCAGCTGAGGGAGATCATGCGCGGCGTACCGGAGG AGAGGCAGTCGCTCCTCTTCTCCGCCACGATGCCCAAGCAGCTCGTGCAG TTCGCGAGGGCCGGCCTGAAGGACCCGGTCCTCATCCGCCTGGACACGGA GAGCAAGATCAGCACCGAGCTCAGGTGTGGTGTTGGTGGTGATGGTGTTG TTGTTGTTGTGGTTGTTGTTGATGTCGTTGGCGTTGATGTTGGTGTTGGT GTTGGTGTTGGTGTTGTTGTCGTTGATGTCCATCTTGTCGTCGATGATGT TGTGGTTGGTGTTGTGGTTGATGTTGTCGTTGGTGGTCGTGCTGTTGTCG TCGATGTCCATCCTGTCGTCGATGATGTTGTCGTTGATGCTGTCGTTGAT GCTGTCGTTGGTGTGCGTGTTGTTTGTGTTGTGGATGTTGTCGTTGGTTG GGTGTGAGGTGTGACGACACGCCAAGGGTGGGGATGGTGACCGGGGCGCT AGGTTGAGGGTGGTGGAAATGGGCACGAGTGGAGTTGTGTTGCCGTGAGA AGTCTTGTTTTAATACTATTGGTTGAGACGGGAAAAGGTAATGCTAGTGG CGGCGGTACCCAAGCACGTGGCCCCCTACGTCAGTCAGGGCCAATCATGC GTGCCCCTTTTTGGATTGCCGTTCTCCAATGGTTGGACGTTTGCGAACCA GAAGCTTTGCATCACGTCCATGCGTTGCTTCTGTCCGAAGCAGCTTCGCG TCACCCCCGACGGTTTTGGCAACACAACCGTGAAACTCCTCGGTGCAACC CTTAACACACCACATCGTCGCTGGTGCTGTTTCATTTGCGTGCCCCAAGC CTTGCTTTCCTGACCTGCCGAAGCCTGGATAAGCCCGCCGCGCTGCTGTT CCTTCTGAGGGAGGTGATACCGGAGGATGACATGACCATCGTCTTCGTTG CCACTCGTCACCACGCGGAGTTTCTGCACGAGGTAAACGCACCCGGCGAA AGGAGAGTTCGCCCTGTTTGTCAACCTGCTTTCGCCCCCGTCTCGTTTGT ATGTCGCGCTGAGGGGGGGGGTCTTGGTCCGTAACCCTATTCTACTTTTC TGTTTTCAGTAGTCGTGTGTGCAGATGCTTTTATCTTGGCGAGTGATGGG GGACATTTTCTGGCTCTTTCTGTTTTGCTGTGACTGAGAAAGGGCCACGA AACCAATCGCACCCGCCCCCGGCACCGATCTGTTCAACTACTTTACACGG CGTAAACGGCAAATCTATCGACGTTGTACTCTTGTCAATGGGTAGGCCTC GATGTACGTGCGGGGGAATGTGCCCACCGCTGCCCACCCGGAGGGAACAG TGCTTGGCAACAAAAGCAAGCAACTTATTGCCACGCTTGTGTTTTCTTGC TTTCTTTCGGTGGTACACGCACCAGCCAGCTGACCAATCAAAACTCACCA GCCTCCGCGGGACAACAACGCGAAAAGCGCTGTCGCTTCGGCGGTGCCCC GCGTGTGCGTCCAAATGCGCCATGTGTTTAGTCTGTTTCGTGATGGCCGG CATCTGTTGACGGCGTTGGGAGGTGTAGGTGGGACCCACTTGCCTGCTTG GGCATTCTTTTTCCGTCCCTTGCTTCTTGTACCCGCTCCGTCTGCCTTTT TTTTTTTTTTCCTGATGCTTGTTCATAGATACACTGCTTTTTTTCAAACT TTCGGGGAACCTGTTTTCGGCGTCTCGTTTTTTCTTCTTTGTTCGATTCA GCTGTTAAAAGAGGCCGGCACTTCGAGCAGCGTCGTGTACGGGGCCATGG ACCAGGAAGCCCGGTCTATCCACCTCGACAAGTTTAGAAAGGGAAAGGTG ACGCGCGAGACTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1119:14042..18556+

>mRNA_Ecto-sp13_S_contig1119.1051.1 ID=mRNA_Ecto-sp13_S_contig1119.1051.1|Name=mRNA_Ecto-sp13_S_contig1119.1051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=927bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1119:14042..18556+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGCCTCCAGCAAAGCCGAAGGTCGGGAGCTTCCAGGCTATGGGGCT
CGGCCAGGACCTCTTTCGAGGGATCATGGCCATGGGCTACAAGGTTCCTA
CTCCCGTGCAGCGGAAGTCTCTCCCCGTCACCCTCGCCGGCGCCGACGTG
GTGGTCATGGCAAGGACCGGTTCGGGAAAGACTGCGGCGTTCCTCATCCC
GGTGCTGGAGAAGCTCGGCAGCCACAGCCACAAGATGGGAGCTCGCTCCA
TAATTCTCTCGCCAACGCGAGAGCTCGCCGTGCAGACGCTGACGTTTGCG
CGCAAGATGTCGAAGCTGAAGGACTTGAGGATGGCCCTTCTCGTCGGCGG
GGATAGCATGGACAAGCAGTTCACCGCGCTCGCGGACAACCCGGATATCA
TCATCGCCACGCCCGGCCGTCTCATGCACCACCTGCAGGAAGTGCCCGAG
TTCACCCTCCGCAGCGTGGAGGTGTTGGTGTTCGACGAGGCCGACAGGCT
GTTCGAGATGGGCTTCGCCGAGCAGCTGAGGGAGATCATGCGCGGCGTAC
CGGAGGAGAGGCAGTCGCTCCTCTTCTCCGCCACGATGCCCAAGCAGCTC
GTGCAGTTCGCGAGGGCCGGCCTGAAGGACCCGGTCCTCATCCGCCTGGA
CACGGAGAGCAAGATCAGCACCGAGCTCAGCCTTGCTTTCCTGACCTGCC
GAAGCCTGGATAAGCCCGCCGCGCTGCTGTTCCTTCTGAGGGAGGTGATA
CCGGAGGATGACATGACCATCGTCTTCGTTGCCACTCGTCACCACGCGGA
GTTTCTGCACGAGCTGTTAAAAGAGGCCGGCACTTCGAGCAGCGTCGTGT
ACGGGGCCATGGACCAGGAAGCCCGGTCTATCCACCTCGACAAGTTTAGA
AAGGGAAAGGTGACGCGCGAGACTTGA
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