mRNA_Ecto-sp13_S_contig11186.1047.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: D8LAZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ1_ECTSI) HSP 1 Score: 760 bits (1962), Expect = 1.410e-256 Identity = 414/445 (93.03%), Postives = 417/445 (93.71%), Query Frame = 1
Query: 28 PGSLPQQHSPDEAAATAXXXXXXXADVHRTSSAPSPGLLAGKVGSGRVSSTSSSSS-RFSGSGDSAGGIEPPTGHGPREFTLGAMDGGEGRAGSAGSDGLFHDAQDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLRSPVPSQGNSPFRSPRDRDPSSPSVARAGTGASHLLFGLAIPSQPQRLP 1359
PGSLPQQHSPD AAATA A VHRTSSAPSPGLLAGKVG GRVSSTS RFSGSG S GGIEPPTGHGPREFTLGAMDGGE DGLFHDAQDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPV+GGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLRSPVPSQGNSP RSP+DRDPSSPSV + GTGASHLLFGLAIPSQPQRLP
Sbjct: 49 PGSLPQQHSPDHAAATAAAADAPVAGVHRTSSAPSPGLLAGKVGGGRVSSTSXXXXXRFSGSGGSIGGIEPPTGHGPREFTLGAMDGGEXXXXXXXXDGLFHDAQDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVKGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLRSPVPSQGNSPVRSPKDRDPSSPSVTKDGTGASHLLFGLAIPSQPQRLP 493
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A835YQQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ4_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.720e-45 Identity = 134/393 (34.10%), Postives = 174/393 (44.27%), Query Frame = 1
Query: 349 MPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVR-----------------CL-----------------------VHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRG-GQKAKMLARS-RPSA--SPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGW-------------------DFGQFFVVKESLALMYKELQ--------------------------LPSEALLKYQELAALILTMGE----------GSEAGLRSPVPS 1230
MP L++YDP +LW +++R VYMPLR+L K P P +++EL V+ CL VHR+ E AA D P + Y+A FA +YMV+AESQE YK TV+P +RAW+D V+A+ WL+L D GK+F W+CADFY KTPGDR +LVSLYV A +A++ RP SPRH PK+WSDL K+G+ V+E FE R R Y EL LD RG D + + ++ E Q LP+EALLKYQELAALI+T+ E G A P+PS
Sbjct: 131 MPALAMYDPGKLWPHLQRLFEVYMPLRRLTLKLPTSEQPVSVEELAVKIMQCPSAALRFSRPCAVCLLYRHALLSRSLPLAVAAAFAIAQVHRSRTNMEKAALKYDIPEDWYKAPFASVYMVTAESQEQYKSTVKPQLRAWVDAVQAQTRARGT--WLILYVGIAPQPQQAAKGGSD-----DMHGKVFGWICADFYHKTPGDRSALVSLYVAAEDAAAAIATVASPMAQALRPGGPTSPRHRPKEWSDLSNKIGQAVMESFEMRARLYKLELRRLDNRRGAANGCSTRAKQQHVNACSMRRSADIQRAPAIAVRAGVVVPEGQYASGLGNHYGLGLTLCDAGRPRVQFGLPAEALLKYQELAALIVTLSEARALSASDRGGDGAAAAEPIPS 516
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A6A3E7M6_9STRA (Foie-gras_1 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3E7M6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.590e-15 Identity = 81/297 (27.27%), Postives = 122/297 (41.08%), Query Frame = 1
Query: 358 LSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKT-----------PGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLR 1215
+ V D +W++V L +PLR + + V I++LP+ VAAR + P +Y+ E + Y+ VRP + AW+D + A WL+L KIF L ADF P S +SL +T + K L + + H QW++LL ++ R V++ F+ R Y L LDA RG GWDFG FF+ KE LALMY+++ L +A+ EL A+ + + E + R
Sbjct: 23 VGVTDDGGVWQFVAPSLSQRLPLRAIEWRN-LVGVTKRIEQLPLHF----------VAARSGEEPPP------TCVYLAKCEDLDAYRSAVRPPLAAWVDAMTAAKVE-----WLVLYVPLGTRAKAAGNQPNPVYR------KIFERLRADFAHPRRGGALLGGAIGPASASSSLSLS-QSSTLLERVCKIDTLEGTSVLGQQQQHESQWTELLLRLRRCVMDAFQTRCFQYEERLRVLDARRGTAGWDFGAFFLAKERLALMYQQMYLQDDAIRHLDELDAIFVNLNEAEKQTFR 290
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A8K1C3H2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3H2_PYTOL) HSP 1 Score: 89.7 bits (221), Expect = 2.730e-15 Identity = 82/315 (26.03%), Postives = 125/315 (39.68%), Query Frame = 1
Query: 328 HDAQDVPMPTLSV--YDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSK---------------------TPGDRCSLVSLYVDGNTPVRGGQ-----KAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTM 1188
H QDV P L V YD +W+++ L + +PLR + + V ID LP+ + E +Y++ E + YK TV+ I WIDK+ A W+LL +IF + ADF K T S +S + G++ G K + L + + HH QW++LL ++ R ++E FE + Y E+ LD R GWDF FFV KE LAL+Y+++ L +A+ EL A+ L++
Sbjct: 11 HFTQDVLSPGLQVGYYDEGGVWQFLAPSLAMRLPLRAIEWRN-LVGVTKTIDRLPLN---------------FIPNAVEASSMPLLCLYVIKCEDLDRYKSTVKQQIAQWIDKMNAAKVD-----WMLLYVPLGTRAKTGGRHANNAVYK-----RIFEKIRADFSHKKSSSSGTASTGVSSAGSLGGNTSAGTISNLSSVISGSSSNSGISADRICKIETLEGASVVGAQSHHETQWTELLLRLRRWIMEAFEFKCFQYEEEVRVLDTKRSFRGWDFAPFFVAKERLALIYQQMYLLDDAIRHLDELEAIFLSL 299
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: G4Z0E3_PHYSP (Foie-gras_1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z0E3_PHYSP) HSP 1 Score: 88.2 bits (217), Expect = 8.370e-15 Identity = 75/268 (27.99%), Postives = 112/268 (41.79%), Query Frame = 1
Query: 460 GPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAF-------IYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADF-YSKTPG-------DRCSLVSLYVDGNTPVRGGQ-KAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLR 1215
P+ LP+R + R L G V R+ P S A +Y+V E + YK VRP + AW+D + A WL+L KIF L ADF + + G S + Y + ++ K L + + H QW++LL ++ R V++ F+ R Y L LDA R + GWDFG FF+ KE LALMY+++ L +A+ EL A+ + + E + R
Sbjct: 36 APSLSQRLPLRAIEWRNLVG--VTKRIEQLPLHFVEVSRASQDPPPTCVYLVKCEDLDAYKSAVRPPLAAWVDAMTAAKVE-----WLVLYVPLGTRPKAAGGQPNPVYR------KIFDRLRADFAHPRRSGALLGGAIGAASASASYAAAASALQERVCKIDTLEGTSVLGQQQQHESQWTELLLRLRRCVMDAFQTRCFQYEERLRVLDAKRSIAGWDFGAFFLAKERLALMYQQMYLQDDAIRHLDELDAIFVNLNETEKKTFR 290
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A3M6VN00_9STRA (Foie-gras_1 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VN00_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 8.300e-13 Identity = 70/258 (27.13%), Postives = 107/258 (41.47%), Query Frame = 1
Query: 460 GPTNIDELPVRCLVHRTLAGTEVAARLVD-----------TPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRGGQKAKM--LARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGE 1194
P+ + LP+R + R L G + TP + F +IY+V E + YK VRP I W+D + WLLL KIF L DF K SL+ G++ V + K+ L + + H QW++L+ ++ ++ FE + Y +L LD R +GW+FG FFV KE LALMY+++ L +A+ EL A+ + + E
Sbjct: 33 APSLMQRLPLRGIEWRNLVGVTKCINQLPLYFMELSIANMTP----KLPFNWIYLVKCEDFDTYKHMVRPAIATWVDAMTVAQIE-----WLLLYVPMGTHPKTAGNVPHPIYR------KIFDKLKTDFGQKK---NSSLLGPTSGGSSSVFYERVCKIDTLEGTSIVGQQQQHESQWTELVMRLKCCIMSAFELKCFQYEEKLRILDGKRNAVGWNFGDFFVAKERLALMYQDMYLQDDAIRHLDELDAIFVNLNE 272
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: W4KJG3_HETIT (TRAPPC10 domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4KJG3_HETIT) HSP 1 Score: 80.9 bits (198), Expect = 1.900e-12 Identity = 71/261 (27.20%), Postives = 111/261 (42.53%), Query Frame = 1
Query: 385 WEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQEL 1167
W++++ L +PLR L KP + I EL V LV E +++ T E+ + +Y+V+ E E YK +VR I+ W V R E WLLL +D + ADF + DRC +S + P W+DL++K+ +L F++ V + ++ D+ RGM GW+F FF++KESLA ++ + L +ALL+Y EL
Sbjct: 22 WQHLQNGLSSQLPLRNLHWKPVSRPSIRTIQELEVE-LVALDSVRDEHTSQVPSTLLEKPLLN---LYVVTCEDNETYKTSVRKQIKEWHTIVSQRKNQE----WLLLHVTRPDARSAASGFFQMKGSVLDK-------IRADF-NLDKRDRCVQLSWTTGQDNPAA-----------------------WADLISKIKEGILSAFDSAVAQRSEDVKRSDSQRGMPGWNFCTFFILKESLASSFEGMNLFEDALLQYDEL 243
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A0L0STD5_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0STD5_ALLM3) HSP 1 Score: 77.4 bits (189), Expect = 2.320e-11 Identity = 72/278 (25.90%), Postives = 116/278 (41.73%), Query Frame = 1
Query: 337 QDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADF-YSKTPGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQEL 1167
Q+ P L+ D +LW +V+R LM +PLR L K ++ G I L VR + TP+ +Y V + E Y+Q +R IRAW+D + E WL++ + + +F + DF DRC + L +D + AR + W + ++ +L F+ +V Y ++ LDA R M GW+F QFF++KE LA ++ + L +AL++Y+EL
Sbjct: 49 QEEPRALLTYRDDYQLWPHVQRELMPRLPLRNLTWK--SMRGTRTIPLLDVRVRPFEEGMLPRTSMFTAPTPS-------LHLYFVHCDDAETYRQVIRGQIRAWVDLFATKRDQE----WLIVYIATETKTSKFLP---------NMKTSVFEKIKTDFGKGSDKRDRCLALRL-LDAD------------ARDQDV---------WGEFFQRIKDGILTSFDTQVMRYDEDIQRLDAQRMMPGWNFCQFFLLKEGLANCFEAIALLDDALMQYEEL 282
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A0L0SJJ3_ALLM3 (TRAPPC10 domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SJJ3_ALLM3) HSP 1 Score: 77.4 bits (189), Expect = 2.500e-11 Identity = 72/278 (25.90%), Postives = 116/278 (41.73%), Query Frame = 1
Query: 337 QDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADF-YSKTPGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQEL 1167
Q+ P L+ D +LW +V+R LM +PLR L K ++ G I L VR + TP+ +Y V + E Y+Q +R IRAW+D + E WL++ + + +F + DF DRC + L +D + AR + W + ++ +L F+ +V Y ++ LDA R M GW+F QFF++KE LA ++ + L +AL++Y+EL
Sbjct: 49 QEEPRALLTYRDDYQLWPHVQRELMPRLPLRNLTWK--SMRGTRTIPLLDVRVRPFEEGMLPRTSMFTAPTPS-------LHLYFVHCDDAETYRQVIRAQIRAWVDLFATKRDQE----WLIVYIATETKTSKFLP---------NMKTSVFEKIKTDFGKGSDKRDRCLALRL-LDAD------------ARDQDV---------WGEFFQRIKDGILTSFDTQVMRYDEDIQRLDAQRMMPGWNFCQFFLLKEGLANCFEAIALLDDALVQYEEL 282
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A8K1C7E6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7E6_PYTOL) HSP 1 Score: 71.6 bits (174), Expect = 2.190e-10 Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 940 HHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTM 1188
HH QW++LL ++ R ++E FE + Y E+ LD R GWDF FFV KE LAL+Y+++ L +A+ EL A+ L++
Sbjct: 49 HHETQWTELLLRLRRWIMEAFEFKCFQYEEEVRVLDTKRSFRGWDFAPFFVAKERLALIYQQMYLLDDAIRHLDELEAIFLSL 131 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11186.1047.1 >prot_Ecto-sp13_S_contig11186.1047.1 ID=prot_Ecto-sp13_S_contig11186.1047.1|Name=mRNA_Ecto-sp13_S_contig11186.1047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=453bp GGSSAFASSPGSLPQQHSPDEAAATAAAADAPAADVHRTSSAPSPGLLAGback to top mRNA from alignment at Ecto-sp13_S_contig11186:214..5095- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11186.1047.1 ID=mRNA_Ecto-sp13_S_contig11186.1047.1|Name=mRNA_Ecto-sp13_S_contig11186.1047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11186:214..5095- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11186:214..5095- >mRNA_Ecto-sp13_S_contig11186.1047.1 ID=mRNA_Ecto-sp13_S_contig11186.1047.1|Name=mRNA_Ecto-sp13_S_contig11186.1047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1359bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11186:214..5095- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |