mRNA_Ecto-sp13_S_contig11186.1047.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11186.1047.1
Unique NamemRNA_Ecto-sp13_S_contig11186.1047.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: D8LAZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ1_ECTSI)

HSP 1 Score: 760 bits (1962), Expect = 1.410e-256
Identity = 414/445 (93.03%), Postives = 417/445 (93.71%), Query Frame = 1
Query:   28 PGSLPQQHSPDEAAATAXXXXXXXADVHRTSSAPSPGLLAGKVGSGRVSSTSSSSS-RFSGSGDSAGGIEPPTGHGPREFTLGAMDGGEGRAGSAGSDGLFHDAQDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLRSPVPSQGNSPFRSPRDRDPSSPSVARAGTGASHLLFGLAIPSQPQRLP 1359
            PGSLPQQHSPD AAATA       A VHRTSSAPSPGLLAGKVG GRVSSTS     RFSGSG S GGIEPPTGHGPREFTLGAMDGGE        DGLFHDAQDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPV+GGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLRSPVPSQGNSP RSP+DRDPSSPSV + GTGASHLLFGLAIPSQPQRLP
Sbjct:   49 PGSLPQQHSPDHAAATAAAADAPVAGVHRTSSAPSPGLLAGKVGGGRVSSTSXXXXXRFSGSGGSIGGIEPPTGHGPREFTLGAMDGGEXXXXXXXXDGLFHDAQDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVKGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLRSPVPSQGNSPVRSPKDRDPSSPSVTKDGTGASHLLFGLAIPSQPQRLP 493          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A835YQQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.720e-45
Identity = 134/393 (34.10%), Postives = 174/393 (44.27%), Query Frame = 1
Query:  349 MPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVR-----------------CL-----------------------VHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRG-GQKAKMLARS-RPSA--SPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGW-------------------DFGQFFVVKESLALMYKELQ--------------------------LPSEALLKYQELAALILTMGE----------GSEAGLRSPVPS 1230
            MP L++YDP +LW +++R   VYMPLR+L  K P    P +++EL V+                 CL                       VHR+    E AA   D P + Y+A FA +YMV+AESQE YK TV+P +RAW+D V+A+        WL+L                      D  GK+F W+CADFY KTPGDR +LVSLYV            A  +A++ RP    SPRH PK+WSDL  K+G+ V+E FE R R Y  EL  LD  RG                       D  +   +     ++  E Q                          LP+EALLKYQELAALI+T+ E          G  A    P+PS
Sbjct:  131 MPALAMYDPGKLWPHLQRLFEVYMPLRRLTLKLPTSEQPVSVEELAVKIMQCPSAALRFSRPCAVCLLYRHALLSRSLPLAVAAAFAIAQVHRSRTNMEKAALKYDIPEDWYKAPFASVYMVTAESQEQYKSTVKPQLRAWVDAVQAQTRARGT--WLILYVGIAPQPQQAAKGGSD-----DMHGKVFGWICADFYHKTPGDRSALVSLYVAAEDAAAAIATVASPMAQALRPGGPTSPRHRPKEWSDLSNKIGQAVMESFEMRARLYKLELRRLDNRRGAANGCSTRAKQQHVNACSMRRSADIQRAPAIAVRAGVVVPEGQYASGLGNHYGLGLTLCDAGRPRVQFGLPAEALLKYQELAALIVTLSEARALSASDRGGDGAAAAEPIPS 516          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A6A3E7M6_9STRA (Foie-gras_1 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3E7M6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.590e-15
Identity = 81/297 (27.27%), Postives = 122/297 (41.08%), Query Frame = 1
Query:  358 LSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKT-----------PGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLR 1215
            + V D   +W++V   L   +PLR +  +   V     I++LP+            VAAR  + P          +Y+   E  + Y+  VRP + AW+D + A         WL+L                          KIF  L ADF               P    S +SL    +T +    K   L  +      + H  QW++LL ++ R V++ F+ R   Y   L  LDA RG  GWDFG FF+ KE LALMY+++ L  +A+    EL A+ + + E  +   R
Sbjct:   23 VGVTDDGGVWQFVAPSLSQRLPLRAIEWRN-LVGVTKRIEQLPLHF----------VAARSGEEPPP------TCVYLAKCEDLDAYRSAVRPPLAAWVDAMTAAKVE-----WLVLYVPLGTRAKAAGNQPNPVYR------KIFERLRADFAHPRRGGALLGGAIGPASASSSLSLS-QSSTLLERVCKIDTLEGTSVLGQQQQHESQWTELLLRLRRCVMDAFQTRCFQYEERLRVLDARRGTAGWDFGAFFLAKERLALMYQQMYLQDDAIRHLDELDAIFVNLNEAEKQTFR 290          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A8K1C3H2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3H2_PYTOL)

HSP 1 Score: 89.7 bits (221), Expect = 2.730e-15
Identity = 82/315 (26.03%), Postives = 125/315 (39.68%), Query Frame = 1
Query:  328 HDAQDVPMPTLSV--YDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSK---------------------TPGDRCSLVSLYVDGNTPVRGGQ-----KAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTM 1188
            H  QDV  P L V  YD   +W+++   L + +PLR +  +   V     ID LP+                 +    E        +Y++  E  + YK TV+  I  WIDK+ A         W+LL                          +IF  + ADF  K                     T     S +S  + G++   G       K + L  +    +  HH  QW++LL ++ R ++E FE +   Y  E+  LD  R   GWDF  FFV KE LAL+Y+++ L  +A+    EL A+ L++
Sbjct:   11 HFTQDVLSPGLQVGYYDEGGVWQFLAPSLAMRLPLRAIEWRN-LVGVTKTIDRLPLN---------------FIPNAVEASSMPLLCLYVIKCEDLDRYKSTVKQQIAQWIDKMNAAKVD-----WMLLYVPLGTRAKTGGRHANNAVYK-----RIFEKIRADFSHKKSSSSGTASTGVSSAGSLGGNTSAGTISNLSSVISGSSSNSGISADRICKIETLEGASVVGAQSHHETQWTELLLRLRRWIMEAFEFKCFQYEEEVRVLDTKRSFRGWDFAPFFVAKERLALIYQQMYLLDDAIRHLDELEAIFLSL 299          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: G4Z0E3_PHYSP (Foie-gras_1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z0E3_PHYSP)

HSP 1 Score: 88.2 bits (217), Expect = 8.370e-15
Identity = 75/268 (27.99%), Postives = 112/268 (41.79%), Query Frame = 1
Query:  460 GPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAF-------IYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADF-YSKTPG-------DRCSLVSLYVDGNTPVRGGQ-KAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGSEAGLR 1215
             P+    LP+R +  R L G  V  R+   P      S A        +Y+V  E  + YK  VRP + AW+D + A         WL+L                          KIF  L ADF + +  G          S  + Y    + ++    K   L  +      + H  QW++LL ++ R V++ F+ R   Y   L  LDA R + GWDFG FF+ KE LALMY+++ L  +A+    EL A+ + + E  +   R
Sbjct:   36 APSLSQRLPLRAIEWRNLVG--VTKRIEQLPLHFVEVSRASQDPPPTCVYLVKCEDLDAYKSAVRPPLAAWVDAMTAAKVE-----WLVLYVPLGTRPKAAGGQPNPVYR------KIFDRLRADFAHPRRSGALLGGAIGAASASASYAAAASALQERVCKIDTLEGTSVLGQQQQHESQWTELLLRLRRCVMDAFQTRCFQYEERLRVLDAKRSIAGWDFGAFFLAKERLALMYQQMYLQDDAIRHLDELDAIFVNLNETEKKTFR 290          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A3M6VN00_9STRA (Foie-gras_1 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VN00_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 8.300e-13
Identity = 70/258 (27.13%), Postives = 107/258 (41.47%), Query Frame = 1
Query:  460 GPTNIDELPVRCLVHRTLAGTEVAARLVD-----------TPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRGGQKAKM--LARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGE 1194
             P+ +  LP+R +  R L G       +            TP    +  F +IY+V  E  + YK  VRP I  W+D +           WLLL                          KIF  L  DF  K      SL+     G++ V   +  K+  L  +      + H  QW++L+ ++   ++  FE +   Y  +L  LD  R  +GW+FG FFV KE LALMY+++ L  +A+    EL A+ + + E
Sbjct:   33 APSLMQRLPLRGIEWRNLVGVTKCINQLPLYFMELSIANMTP----KLPFNWIYLVKCEDFDTYKHMVRPAIATWVDAMTVAQIE-----WLLLYVPMGTHPKTAGNVPHPIYR------KIFDKLKTDFGQKK---NSSLLGPTSGGSSSVFYERVCKIDTLEGTSIVGQQQQHESQWTELVMRLKCCIMSAFELKCFQYEEKLRILDGKRNAVGWNFGDFFVAKERLALMYQDMYLQDDAIRHLDELDAIFVNLNE 272          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: W4KJG3_HETIT (TRAPPC10 domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4KJG3_HETIT)

HSP 1 Score: 80.9 bits (198), Expect = 1.900e-12
Identity = 71/261 (27.20%), Postives = 111/261 (42.53%), Query Frame = 1
Query:  385 WEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQEL 1167
            W++++  L   +PLR L  KP +      I EL V  LV       E  +++  T  E+   +   +Y+V+ E  E YK +VR  I+ W   V  R   E    WLLL                     +D        + ADF +    DRC  +S     + P                         W+DL++K+   +L  F++ V   + ++   D+ RGM GW+F  FF++KESLA  ++ + L  +ALL+Y EL
Sbjct:   22 WQHLQNGLSSQLPLRNLHWKPVSRPSIRTIQELEVE-LVALDSVRDEHTSQVPSTLLEKPLLN---LYVVTCEDNETYKTSVRKQIKEWHTIVSQRKNQE----WLLLHVTRPDARSAASGFFQMKGSVLDK-------IRADF-NLDKRDRCVQLSWTTGQDNPAA-----------------------WADLISKIKEGILSAFDSAVAQRSEDVKRSDSQRGMPGWNFCTFFILKESLASSFEGMNLFEDALLQYDEL 243          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A0L0STD5_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0STD5_ALLM3)

HSP 1 Score: 77.4 bits (189), Expect = 2.320e-11
Identity = 72/278 (25.90%), Postives = 116/278 (41.73%), Query Frame = 1
Query:  337 QDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADF-YSKTPGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQEL 1167
            Q+ P   L+  D  +LW +V+R LM  +PLR L  K  ++ G   I  L VR            +     TP+         +Y V  +  E Y+Q +R  IRAW+D    +   E    WL++                      + +  +F  +  DF       DRC  + L +D +            AR +           W +   ++   +L  F+ +V  Y  ++  LDA R M GW+F QFF++KE LA  ++ + L  +AL++Y+EL
Sbjct:   49 QEEPRALLTYRDDYQLWPHVQRELMPRLPLRNLTWK--SMRGTRTIPLLDVRVRPFEEGMLPRTSMFTAPTPS-------LHLYFVHCDDAETYRQVIRGQIRAWVDLFATKRDQE----WLIVYIATETKTSKFLP---------NMKTSVFEKIKTDFGKGSDKRDRCLALRL-LDAD------------ARDQDV---------WGEFFQRIKDGILTSFDTQVMRYDEDIQRLDAQRMMPGWNFCQFFLLKEGLANCFEAIALLDDALMQYEEL 282          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A0L0SJJ3_ALLM3 (TRAPPC10 domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SJJ3_ALLM3)

HSP 1 Score: 77.4 bits (189), Expect = 2.500e-11
Identity = 72/278 (25.90%), Postives = 116/278 (41.73%), Query Frame = 1
Query:  337 QDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPPAVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLXXXXXXXXXXXXXXXXXXXXAVDAQGKIFWWLCADF-YSKTPGDRCSLVSLYVDGNTPVRGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQEL 1167
            Q+ P   L+  D  +LW +V+R LM  +PLR L  K  ++ G   I  L VR            +     TP+         +Y V  +  E Y+Q +R  IRAW+D    +   E    WL++                      + +  +F  +  DF       DRC  + L +D +            AR +           W +   ++   +L  F+ +V  Y  ++  LDA R M GW+F QFF++KE LA  ++ + L  +AL++Y+EL
Sbjct:   49 QEEPRALLTYRDDYQLWPHVQRELMPRLPLRNLTWK--SMRGTRTIPLLDVRVRPFEEGMLPRTSMFTAPTPS-------LHLYFVHCDDAETYRQVIRAQIRAWVDLFATKRDQE----WLIVYIATETKTSKFLP---------NMKTSVFEKIKTDFGKGSDKRDRCLALRL-LDAD------------ARDQDV---------WGEFFQRIKDGILTSFDTQVMRYDEDIQRLDAQRMMPGWNFCQFFLLKEGLANCFEAIALLDDALVQYEEL 282          
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Match: A0A8K1C7E6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7E6_PYTOL)

HSP 1 Score: 71.6 bits (174), Expect = 2.190e-10
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  940 HHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTM 1188
            HH  QW++LL ++ R ++E FE +   Y  E+  LD  R   GWDF  FFV KE LAL+Y+++ L  +A+    EL A+ L++
Sbjct:   49 HHETQWTELLLRLRRWIMEAFEFKCFQYEEEVRVLDTKRSFRGWDFAPFFVAKERLALIYQQMYLLDDAIRHLDELEAIFLSL 131          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11186.1047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ1_ECTSI1.410e-25693.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQQ4_9STRA2.720e-4534.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6A3E7M6_9STRA1.590e-1527.27Foie-gras_1 domain-containing protein n=4 Tax=Phyt... [more]
A0A8K1C3H2_PYTOL2.730e-1526.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4Z0E3_PHYSP8.370e-1527.99Foie-gras_1 domain-containing protein n=1 Tax=Phyt... [more]
A0A3M6VN00_9STRA8.300e-1327.13Foie-gras_1 domain-containing protein n=2 Tax=Pero... [more]
W4KJG3_HETIT1.900e-1227.20TRAPPC10 domain-containing protein n=1 Tax=Heterob... [more]
A0A0L0STD5_ALLM32.320e-1125.90Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A0L0SJJ3_ALLM32.500e-1125.90TRAPPC10 domain-containing protein n=1 Tax=Allomyc... [more]
A0A8K1C7E6_PYTOL2.190e-1040.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11186contigEcto-sp13_S_contig11186:214..5095 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score766.9
Seed ortholog evalue5.2e-219
Seed eggNOG ortholog2880.D8LAZ1
Model size1360
KEGG koko:K20307,ko:K20476
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.early endosome to Golgi transport
EggNOG OGsKOG1931@1,KOG1931@2759
Cds size1359
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11186.1047.1prot_Ecto-sp13_S_contig11186.1047.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11186 215..5095 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462582.5302503-CDS-Ecto-sp13_S_contig11186:214..4121681462582.5302503-CDS-Ecto-sp13_S_contig11186:214..412Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11186 215..412 -
1681462582.541718-CDS-Ecto-sp13_S_contig11186:1165..12591681462582.541718-CDS-Ecto-sp13_S_contig11186:1165..1259Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11186 1166..1259 -
1681462582.55158-CDS-Ecto-sp13_S_contig11186:1543..16351681462582.55158-CDS-Ecto-sp13_S_contig11186:1543..1635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11186 1544..1635 -
1681462582.5609221-CDS-Ecto-sp13_S_contig11186:2607..26791681462582.5609221-CDS-Ecto-sp13_S_contig11186:2607..2679Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11186 2608..2679 -
1681462582.569297-CDS-Ecto-sp13_S_contig11186:3114..33931681462582.569297-CDS-Ecto-sp13_S_contig11186:3114..3393Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11186 3115..3393 -
1681462582.5778995-CDS-Ecto-sp13_S_contig11186:4022..42021681462582.5778995-CDS-Ecto-sp13_S_contig11186:4022..4202Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11186 4023..4202 -
1681462582.5870852-CDS-Ecto-sp13_S_contig11186:4651..50951681462582.5870852-CDS-Ecto-sp13_S_contig11186:4651..5095Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11186 4652..5095 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11186.1047.1

>prot_Ecto-sp13_S_contig11186.1047.1 ID=prot_Ecto-sp13_S_contig11186.1047.1|Name=mRNA_Ecto-sp13_S_contig11186.1047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=453bp
GGSSAFASSPGSLPQQHSPDEAAATAAAADAPAADVHRTSSAPSPGLLAG
KVGSGRVSSTSSSSSRFSGSGDSAGGIEPPTGHGPREFTLGAMDGGEGRA
GSAGSDGLFHDAQDVPMPTLSVYDPERLWEYVERPLMVYMPLRKLLAKPP
AVSGPTNIDELPVRCLVHRTLAGTEVAARLVDTPAERYRASFAFIYMVSA
ESQEHYKQTVRPLIRAWIDKVEARGGGEDGPGWLLLYVIVAPQGGGSSDA
AAATAAAVDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVRGGQKA
KMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLDA
TRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAALILTMGEGS
EAGLRSPVPSQGNSPFRSPRDRDPSSPSVARAGTGASHLLFGLAIPSQPQ
RLP
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mRNA from alignment at Ecto-sp13_S_contig11186:214..5095-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11186.1047.1 ID=mRNA_Ecto-sp13_S_contig11186.1047.1|Name=mRNA_Ecto-sp13_S_contig11186.1047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11186:214..5095- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCGGCTCCTCGGCCTTCGCCTCCAGCCCGGGCTCCCTTCCGCAGCAGCA TTCACCCGACGAGGCGGCGGCGACCGCCGCAGCGGCCGATGCCCCCGCCG CGGACGTCCACCGGACGTCTTCCGCCCCTTCCCCGGGGCTACTTGCCGGA AAGGTCGGCAGCGGAAGAGTGTCGAGCACGTCATCGTCGTCTTCTCGGTT CAGCGGCAGCGGCGACAGCGCCGGTGGGATCGAACCCCCGACGGGTCACG GGCCGCGGGAGTTTACCCTGGGCGCCATGGATGGCGGCGAGGGAAGGGCG GGGAGCGCCGGAAGCGATGGACTGTTCCACGACGCCCAGGACGTCCCGAT GCCGACGCTGAGCGTGTACGATCCCGAGCGGCTGTGGGAGTACGTGGAGC GGCCGCTGATGGTGTACATGCCGCTGAGAAAGCTGTTAGCTAAGGTGGGA ACTACGACGATATATTTGGGGTGGTTTGTTGCGTCAGTTGTGATGCGCTG CCGTGGTCCTCAGGTGGGGTTTGAAGGGGCGCTGCCTAAAGTTTTCGGGT TGGGGTTTTTGGTGCTGCGCTTAAAGGTGGCACGAGCACGCAGCTGGAGG TTGCTGACATCAGTCATGGTGCTTCGTGCACGCACTTGGCATTTCCACAC GGTGGCGACCTACTTCAATGAACCGCCCCTCGTCCATATTTATTTCGGAC AGTTTGTTTCCAAGCTATTGTAATGAGCGAGCGCATAGCGCCTCCTTCAT CGGAATTCTCGTTGAACCCCCCCCGTCCTGCGTCTCATAAACGAATGCAC GGTCAACCGTCAACTAACAACAGCAAGCAAGCAATGAGGTACCCCACCCC TCCCTCCCCACCCGCGCTTCGCCTCCCTGCTCCACGTCGGTAGCCTCCCG CAGTAAGTGGCCCTACCAACATCGACGAGCTCCCGGTGCGATGTCTCGTC CACCGCACGCTCGCGGGCACGGAGGTGGCGGCGCGGCTCGTGGATACCCC AGCGGAGCGGTACCGGGCATCGTTCGCGTTCATCTACATGGTCAGCGCCG AGAGCCAGGAGCACTACAAGCAGGTGCAGCGGCTACAAGGTGGTGGCGAC TGGGGTACAGATTCCGATGCTGCCCCCAGATCATATTAGACTCTCGGATC CCTATGAAGCCGGGATAGGGGACATCGGGGCTCCGCCATCATGTAGGGGG GGGAGGGGGAGGGTTCTTGCGGAGTTTGGGTTCGCATTGGCCGCGCATCT TACTTGAGAGAGAGAGAAAGTGAGGTTGACCGTTTACCGCCCCGAAAGCC GGACTTGCGGAATGTGGTTGAGGGGTGTATGCAGATGGGTTTGTCAAGAG AAGATGACGTGCGAGTCCTATACGGCAGGCTCCATGGGTGCCCTCTCCGA ACGCAGCGTCGCTGCATTTCGCGCCTGCCTGGACAAACCGTGGTACGCGC AGAACCAATCCAACTGGTTGTGCTTGATTACCCCACCCCGGTCCCCGCCG CCGCACGGAGAGTGAGAGCAAGAACTGACTCCCAATATCTCCCACCATCG GCGTAACCAAACCGGAGGAGTAAGGCATGCTTGTGTCCCGCTCACACCGC CGTATTGAATTCTCCCGATGTAGTTTCTCCGATTCCTTCCGATTTTGCTC ACTTCCGAACCCCACCACCCCGTTTTCCGCCAAAAAAAAAACGCAACGCC AGACGGTTCGGCCGCTGATTCGGGCATGGATTGACAAGGTGGAGGCCCGG GGAGGAGGTGAAGACGGCCCCGGGTGGCTCCTCCTCTACGTTATCGTAGC GCCCCAGGGCGGGGGGTCTTCCGACGCGGCCGCTGCGACGGCGGCGGCGG TCGATGCCCAGGGTAAGATATTCTGGTGGCTGTGCGCCGACTTCTACTCC AAGACCCCAGGGGACAGGTGCTCGTTGGTTTCGCTCTATGTGGACGGGAA CACTCCTGTCAGGGGGGGGCAGAAGGCGAAGGTGAGAGGAAGAAGCCGCC GCGTGCTCTCTTGGCTTGTCAGAAGGCAAAGGTGAGAAGAAGTAGCCACC GCATGCTTTCTTTGACTTCAGAAGGCAAAAGGCTAGAAGAACTCGCGTGC TTTTTGTTTTGGGGGGGAGTCAACGGTCGCTCCTTAATTGCGTTTTTTTT TATCGGCCCTTGCGCAGAAGCTGTACGAGCAGTAGCGAAAATCCAATTTG GTTTTCCGTTCCCCCCGCTGGGCGGAGTCAATGGTCGCCCTTGTGTTGTC GTCTCAATGGGCCCCACCCAAGCAGTTGATGGAAATTGAACAAGTTTGTC GGTCAGTGCTTTTGTGTAGCGGGAACTGGGGTGCTTCATGGAAGTGTATT GAACCCCCCCCCCCCTCCCCCTTTCCTCTTGTGCGCGAATTTCGACGTTC TTGGACACAACCGAAGATGCTGGCGAGGTCGAGGCCAAGCGCAAGCCCGC GCCACCACCCCAAGCAGTGGAGCGACCTCCTCGCCAAGGTGATATTCTTG CTGTTGATGTTTGTGTGTTTCTTTTGCGAAGCATCAACCGTGCTCACCTG TTGGCCAATAAGGATACGTCAGCTGAAGTGCGATTGAAAACACAAAGTGC TTCTGTAGGCCATGGTCTGGGACCGATTGAGAGGGTGTCATGGGAGCGAC CAGGCTATTTTTCCGGATGAGGGACAGAAACGGTAGTACCAGATGAACTA TCCCAAATCGTTCGTTGTACTCCGTCATTGGAAGAGACGTGCGTGTGGGT GTGCGTGGCAACTGTGACCACCGACACGAAGCCCTCTTTGCCGTAAACTG TGCAGTTTCCGCTCTTGCTGTCGTTATTGGTTGCTCTTGCTGTCCTGTGC GTAGCAGCTCCCTTCTCGCTTTGCTTTGCTTTTGTCGCTTGGGTGGCCGA TGAGCATGTCCACGACGACATTGGTTGGAATTGTCAAAGAATTGCCGCTC TTCGACAAAGAAGTTAGTGGACGACAGCGGCGAAAGGAGCGGCGGGGGAT TGACTACTTGCGTGCCAGAATCTCGTTTTTTTTTCGGTTCGTTCTTGGTT TGATTGAATCCATGTCGATAAATAAGGACACACGCTGTCGTACACTGACG TGTATCATGTTTGGTTTGGTTTCTGAATCCAGAGTGTTTGGCTGGCGAGA GCGGCGGCGTCTAGGCCGTCCATAGCATTTTGTATTCGCTATCATTTTAC GGGTGTGACAGATCGACCAGGTGCGGTTCCCCTCCTGTACCATCCTCGCG CGCTGCTTGCTCCCCTCTCGCCCGCATCTGGTCCTTCGTATGACTCGCCT AGGGTGTTTAAGACGTGGTATTCGATGGCTTGATCGGGGACGTGTTGATG CCGTAAACTCGATTCTACTACGTTTGACTCGCCTAGGGTGTTTCAGACAT GGTGTTTAGTTGCTTGATGTATGGCGTGTTCCTGCTGTCAACTCGTTTCT ACTACGACAGGTGGGGCGTGTGGTGCTGGAGGTCTTCGAGGCGAGGGTAA GGTGCTACGCTAGCGAGCTCGGCCACCTCGACGCCACACGGGGGATGATC GGGTGAGGGGAGGGAGGAAGGGAGGGAGGTGTTCTTTACCGTGGCGTCAT GGTCGTGATTGTTTTTGTTGTGTTGGTTGTTGTTGTTGTTGTTGTTGATG CCGCTGCTGGTGGTGGTGGTGATGCTGCTGCTGGTGTAATTATGGGCGCG ATAGGTTTGTGATCAAGTCGTGGCTACTTCTTTCTTGTGAGCGCTTGAGG GTGGTCATGGTCAGAGGACTGCCCACGGCCATATCCAGCATGATGAGCAC CACCCCCAACGTCCCCCCCTCTCCCCTCCCCTCAAGGTGGGATTTTGGAC AATTTTTCGTGGTGAAGGAGTCGCTAGCGCTCATGTACAAGGAGTTGCAG CTTCCGTCCGAGGCGCTTCTCAAGTACCAGGTGCGGCGGATACATATTGC GGAACCCCCTAGCCGGTGGCCATCACGTCTGATTTGCTCGCTGATGATTT CCCGCGTGCTTCGCCTGCGACTCCGTCCGAGACGTCGTCGTGAAGCGCTA CACCGCGATAGGTCTCGTTGTTTGCTGGGTGTCGTGTAGCGCTACACCGG AAAGGTCTCATTGTTTTTTGGGTGTCGTGTAGCGCTACATCGCGATAGTT CTCATTGTTTCTGGGTGTGAAGTCAGTGTCAAGTCTTATTTGAAAATCTT GCCTCCCCGCTCGGATGTTCTCTCTGGCTGCACATGTCTCTTCTCGCAAG CCTTGGATGTTCTCTCTGGCTCACATGTCTCTTTTTCTCGCTCTTTATCT AGACTGTTTTGTCTCCGGCTGCCGCTCCACCTCCCCTCTCTCTCTCTCTT CCCCTCTCTCTCTCTCCCCCTCTCTCTCTCCTCTTCTCCCTCTCCCTCCC CTTCTCTTTTTTTTTTCTTTTTTCTNNNNNNNNNNTTTTTCCCTCTCGCC ACCCCCCCCCCCCCTCTCTCTCCTCCCCCCCCCCTTCCTCCCCCCCCCCC TCCTCTCCCCCCCCCCCCCCCCCCCCCTCTCCCTCTCTCTCTCTCTCTCT TTCTCTCCTCCTCCCTCTTCCTCTCTCTCTTCCTCTCTCTCTTTCTCTCT CTCACGCTCACTCTCACTCTACCTCTCTCGTTTCTCTCTTGTCTGTCTTT CTCTCTGTCTGTTTCGCTGTCCCCTTCTCCCAGGAGCTGGCAGCACTGAT CCTGACGATGGGGGAAGGCTCGGAGGCCGGCCTGCGTTCTCCCGTCCCCA GCCAGGGCAATTCCCCTTTCCGCTCCCCAAGAGACAGAGATCCGTCATCC CCCTCCGTTGCGAGAGCGGGAACCGGAGCGAGTCACCTCTTGTTCGGCCT GGCCATCCCCAGCCAACCGCAACGGCTCCCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11186:214..5095-

>mRNA_Ecto-sp13_S_contig11186.1047.1 ID=mRNA_Ecto-sp13_S_contig11186.1047.1|Name=mRNA_Ecto-sp13_S_contig11186.1047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1359bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11186:214..5095- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCGGCTCCTCGGCCTTCGCCTCCAGCCCGGGCTCCCTTCCGCAGCAGCA
TTCACCCGACGAGGCGGCGGCGACCGCCGCAGCGGCCGATGCCCCCGCCG
CGGACGTCCACCGGACGTCTTCCGCCCCTTCCCCGGGGCTACTTGCCGGA
AAGGTCGGCAGCGGAAGAGTGTCGAGCACGTCATCGTCGTCTTCTCGGTT
CAGCGGCAGCGGCGACAGCGCCGGTGGGATCGAACCCCCGACGGGTCACG
GGCCGCGGGAGTTTACCCTGGGCGCCATGGATGGCGGCGAGGGAAGGGCG
GGGAGCGCCGGAAGCGATGGACTGTTCCACGACGCCCAGGACGTCCCGAT
GCCGACGCTGAGCGTGTACGATCCCGAGCGGCTGTGGGAGTACGTGGAGC
GGCCGCTGATGGTGTACATGCCGCTGAGAAAGCTGTTAGCTAAGCCTCCC
GCAGTAAGTGGCCCTACCAACATCGACGAGCTCCCGGTGCGATGTCTCGT
CCACCGCACGCTCGCGGGCACGGAGGTGGCGGCGCGGCTCGTGGATACCC
CAGCGGAGCGGTACCGGGCATCGTTCGCGTTCATCTACATGGTCAGCGCC
GAGAGCCAGGAGCACTACAAGCAGACGGTTCGGCCGCTGATTCGGGCATG
GATTGACAAGGTGGAGGCCCGGGGAGGAGGTGAAGACGGCCCCGGGTGGC
TCCTCCTCTACGTTATCGTAGCGCCCCAGGGCGGGGGGTCTTCCGACGCG
GCCGCTGCGACGGCGGCGGCGGTCGATGCCCAGGGTAAGATATTCTGGTG
GCTGTGCGCCGACTTCTACTCCAAGACCCCAGGGGACAGGTGCTCGTTGG
TTTCGCTCTATGTGGACGGGAACACTCCTGTCAGGGGGGGGCAGAAGGCG
AAGATGCTGGCGAGGTCGAGGCCAAGCGCAAGCCCGCGCCACCACCCCAA
GCAGTGGAGCGACCTCCTCGCCAAGGTGGGGCGTGTGGTGCTGGAGGTCT
TCGAGGCGAGGGTAAGGTGCTACGCTAGCGAGCTCGGCCACCTCGACGCC
ACACGGGGGATGATCGGGTGGGATTTTGGACAATTTTTCGTGGTGAAGGA
GTCGCTAGCGCTCATGTACAAGGAGTTGCAGCTTCCGTCCGAGGCGCTTC
TCAAGTACCAGGAGCTGGCAGCACTGATCCTGACGATGGGGGAAGGCTCG
GAGGCCGGCCTGCGTTCTCCCGTCCCCAGCCAGGGCAATTCCCCTTTCCG
CTCCCCAAGAGACAGAGATCCGTCATCCCCCTCCGTTGCGAGAGCGGGAA
CCGGAGCGAGTCACCTCTTGTTCGGCCTGGCCATCCCCAGCCAACCGCAA
CGGCTCCCA
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