mRNA_Ecto-sp13_S_contig1118.1038.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 410 bits (1055), Expect = 6.040e-144 Identity = 209/241 (86.72%), Postives = 217/241 (90.04%), Query Frame = 1
Query: 1 MKTSFCAAAGFVIAAGLMPSTAQASGVVTAQQQITLFNPEDFVFSLGGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEMLYMIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASVNFEEPALQKLIESLPDAPAAARQQCLQRCGMADPGNDFSYDYTYDEDTKDSKDSGDEY 723
MKTSFCAAAGFVIAAGLM S Q GVVT QQQITL+NPEDFVFSLGGPEPD LVDGFQ+R VNQLPALDGQGISM LVNLD CAINLPHIHPRATEM+Y+IKGEQ+RVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNN+DPGA+TITTRFFELP EAIQASVNFEEP LQ LIESLPDAPAAARQQCLQRC MA+PGN FSYDYTYD DSGDEY
Sbjct: 1 MKTSFCAAAGFVIAAGLM-SAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYDYTYD------VDSGDEY 234
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 387 bits (994), Expect = 9.250e-135 Identity = 188/227 (82.82%), Postives = 207/227 (91.19%), Query Frame = 1
Query: 1 MKTSFCAAAGFVIAAGLMPSTAQASGVVTAQQQITLFNPEDFVFSLGGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEMLYMIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASVNFEEPALQKLIESLPDAPAAARQQCLQRCGMADPGNDFSYDYTY 681
MKTSFC+AAG V+AAG M STAQASGVVTAQQQIT+FNPEDFVF+LGGPEPD VDGFQIR + Q+PALDGQGI+MALVNLDAC INLPHIHPRATEM Y+I GE +RVAFVEENGGEGAVVNDL+QGDV FFPQGLIHY+QNL CEP TFLAALNNDDPGAVTITTRFFELP+EAIQAS+NFE+PALQ+LIESLPDAPAAAR+QCL+RCG+AD G+ FSY Y Y
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYSYGY 227
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: D7FI68_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.460e-56 Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 1
Query: 1 MKTSFCAAAGFVIAAGLMPSTAQASGVVTAQQQITLFNPEDFVFSLGGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEM 300
MKT FCAAAGFVIAAGLMPST QASGVVTAQQQITLFNPEDFVFSLGGPEPD LVDGFQIRFVNVNQLPALDGQGISMALVNLD CAINLPHIHPRATE+
Sbjct: 1 MKT-FCAAAGFVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEV 99
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI) HSP 1 Score: 182 bits (462), Expect = 1.330e-55 Identity = 94/99 (94.95%), Postives = 94/99 (94.95%), Query Frame = 1
Query: 1 MKTSFCAAAGFVIAAGLMPSTAQASGVVTAQQQITLFNPEDFVFSLGGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATE 297
MKT FCAAAGFVIAAGLM ST QASGVVTAQQQITLFNPEDFVFSLGGPEPD LVDGFQIRFVNVNQLPALDGQGISMALVNLD CAINLPHIHPRATE
Sbjct: 1 MKT-FCAAAGFVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 170 bits (431), Expect = 4.950e-49 Identity = 88/188 (46.81%), Postives = 123/188 (65.43%), Query Frame = 1
Query: 85 TAQQQITLFNPEDFVFSL-GGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEMLYMIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASVNFE-EPALQKLIESLPDAPAAARQQCLQRCGM 642
T Q++ FN EDF+ L P+ ++ G + +N+ +PAL QG++M L+NL+ C NLPH+HPRA+E +Y+I+G V+V F+EENG + +VNDL QG F PQG IHYQ NL CE A +AA NN+DPG +TI +FF+LP AI AS+ +P ++ L SLP PA ++CL+RCG
Sbjct: 37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGN-VQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGF 222
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 154 bits (390), Expect = 4.450e-42 Identity = 81/175 (46.29%), Postives = 109/175 (62.29%), Query Frame = 1
Query: 124 FVFSLGGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEMLYMIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASVNFEEPALQKLIESLPDAPAAA--RQQCLQRCGM 642
F F+ E D G + +V+Q PAL G G+S LV+L C+IN PH+HPRATE++Y+IKG +V V F EENGG V ND+ +GD AFFP LIH+Q N CEPA F+A LN+DD G TI FF LP + + ++ +E + L E LP PA R++C ++CG+
Sbjct: 147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKG-RVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 150 bits (379), Expect = 8.920e-41 Identity = 76/181 (41.99%), Postives = 113/181 (62.43%), Query Frame = 1
Query: 109 FNPEDFVFSLGGPEP---DDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEMLYMIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASVNFEEPALQKLIESLPDAPAAARQQCLQRCGM 642
F+ EDFVF D L G I+ VN+ + P + G+S + ++ C INLPH+HPRATE LYMI+G QV + FV + ++NDL + V FFP+G +HYQQN++CE A F++ L+N+DPG + +++ LP EA+ A+ N ++ + +L LP+ PA AR +CL RCG+
Sbjct: 105 FDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEG-QVTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGL 282
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: A0A0L0G050_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G050_9EUKA) HSP 1 Score: 147 bits (372), Expect = 3.780e-39 Identity = 81/188 (43.09%), Postives = 113/188 (60.11%), Query Frame = 1
Query: 85 TAQQQITLFNPEDFVFSLGGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEMLYMIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASVNFEEPALQKLIESLPDAPAAARQQCLQRCGMAD 648
T Q +++ F DFVF +G I+ + + PAL ++ ++ C INLPHIHPRATE++YM+ G V V FV ENGG GA++N+L+ FFPQGLIH+QQN++CEPA F+++LN DPG +T+ + F LPTEA+ A+ E A+ + LP + AR CL R G AD
Sbjct: 101 TFQSRLSTFQVSDFVFDYCQLPNTGTGNGGTIQPIELAAHPALVLANMAQTKFTIEPCGINLPHIHPRATELVYMVSGA-VTVGFVGENGG-GAIMNNLSADMSTFFPQGLIHFQQNMECEPAVFVSSLNGVDPGTITLPEQLFALPTEALSAAFGQSEAAINLIRNVLPMS--IARSDCLARRGPAD 284
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: A0A0G4FMH1_VITBC (Cupin type-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMH1_VITBC) HSP 1 Score: 145 bits (365), Expect = 6.180e-39 Identity = 78/219 (35.62%), Postives = 120/219 (54.79%), Query Frame = 1
Query: 1 MKTSFCAAAGFVIAAGLMPSTAQASGVVTAQQQITL-----FNPEDFVFSLGGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEMLYMIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASVNFEEPALQKLIESLPDAPAAARQQCLQRCGM 642
++ S A + + A GLM + SG + Q L F EDFVF+L + D G ++R V +P+L G G+S AL L C +N +HPRATE+ Y+I ++ V FVEENGG + N L G ++F P+GL+H+ N CE A FL+ N++DPG +TI F++ + ++QA+ N + + + S+P +P +CL +CG
Sbjct: 3 LRVSAAAVSVVLAALGLMQ---RVSGQAYSPGQTALKFRSQFKTEDFVFNLAAAKAGDAGKGGELRVAAVAAMPSLAGNGVSQALYRLYPCGMNSVQMHPRATELFYVINATELHVGFVEENGGR-TIENVLKTGQLSFVPKGLLHWHYNAGCEDAIFLSTFNHEDPGVLTIVNALFDINSTSLQAAFNVDADQIADIKSSIPASPVPGIAECLAKCGQ 217
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Match: A0A0G4EG82_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC) HSP 1 Score: 144 bits (363), Expect = 7.250e-39 Identity = 77/180 (42.78%), Postives = 103/180 (57.22%), Query Frame = 1
Query: 109 FNPEDFVFSLGGPEPDDLVDGFQIRFVNVNQLPALDGQGISMALVNLDACAINLPHIHPRATEMLYMIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASVNFEEPALQKLIESLPDAPAAA--RQQCLQRCGM 642
F DF F + +G IR Q PAL G G S + ++ C+IN PH+HPRATEMLY+ KG + V F EENGG V ND+ +G+ AFFP LIH+Q N CEPA F+ LN+DD G TI F LP + + ++N +E + L + LP+ PA R QC ++CG+
Sbjct: 69 FGNSDFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKGRLI-VGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1118.1038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1118.1038.1 >prot_Ecto-sp13_S_contig1118.1038.1 ID=prot_Ecto-sp13_S_contig1118.1038.1|Name=mRNA_Ecto-sp13_S_contig1118.1038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp MKTSFCAAAGFVIAAGLMPSTAQASGVVTAQQQITLFNPEDFVFSLGGPEback to top mRNA from alignment at Ecto-sp13_S_contig1118:451..3516- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1118.1038.1 ID=mRNA_Ecto-sp13_S_contig1118.1038.1|Name=mRNA_Ecto-sp13_S_contig1118.1038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3066bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1118:451..3516- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1118:451..3516- >mRNA_Ecto-sp13_S_contig1118.1038.1 ID=mRNA_Ecto-sp13_S_contig1118.1038.1|Name=mRNA_Ecto-sp13_S_contig1118.1038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1118:451..3516- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |