mRNA_Ecto-sp13_S_contig11179.1037.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11179.1037.1
Unique NamemRNA_Ecto-sp13_S_contig11179.1037.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11179.1037.1 vs. uniprot
Match: D7FJX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX5_ECTSI)

HSP 1 Score: 497 bits (1279), Expect = 9.110e-170
Identity = 354/551 (64.25%), Postives = 364/551 (66.06%), Query Frame = 1
Query:    4 SEKEHAQTLAAAAAAHERSALALSETRGALSEAESAAQVAAWESKSLREELEGLRERSEELSSELEAARSREATATRTAREGVGAELEGLRGAVGAAEAAREQAEEGLARLKEKKKRDLQEVRRLNERMMELQQARREEVSDVEGSLQELRAKTGELEHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPRREEREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQAEDAKDISTAALGRANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALKQAAAATAGGAAETNTMDSGSVAGFSTPLRDLSEVAPPSQPPMSADPPMRQRQRHRLSGAGLSSGNLDLEDGGGYFDEDEHKARFRSLSSSIKF*LFEAVYLRHRRGDGMESFICSSGWGWLLVE*LTEPPPPHCGQWQNH*AKKQKNXXXXXXXLCAKQSLEPHLVLVCLFVRTRRCKPKKVCFPRSCWLLLSATAVVMHG*SQAQAKPGDHVKSLLISCASSPVGAAISERLPGLVTWLHQQPPQVCHGRTNACIAEIVVVCGLTA 1656
            SEKEHAQTLAAAA+AHERSALALSETRGALSEAESAAQVAAWESKSLREELEGLRERSEELSSELEA RSREA ATRTAREGVGAELEGLRGAVGAAEA REQAEEGLARLKEKKKRDLQEVRRLNERMMELQQARREEVSD+EGSLQELRAKT ELEHA         XXXXXXXXXXXXXXXXXXXXX PRREEREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQA++AK++S AALGRANA                                AALKQAAAATAGGAAETNT DSGSVA FSTPLRDLSEV PPSQPPMSADPPMRQRQRHRLSGAG SSGNLDLEDGGGYFDEDEHKA                                                                                                                           QAKPGDHVKSLLISCASSPVGAAISERLPGLVTWLHQQPPQ       A +A + ++ G  A
Sbjct:   10 SEKEHAQTLAAAASAHERSALALSETRGALSEAESAAQVAAWESKSLREELEGLRERSEELSSELEATRSREAAATRTAREGVGAELEGLRGAVGAAEAGREQAEEGLARLKEKKKRDLQEVRRLNERMMELQQARREEVSDLEGSLQELRAKTDELEHALAQEEQHQGXXXXXXXXXXXXXXXXXXXXXGPRREEREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQAQNAKNVSAAALGRANARIAELTSKSAQLTRARSAMVAQINALEEQLKSAALKQAAAATAGGAAETNTTDSGSVADFSTPLRDLSEVPPPSQPPMSADPPMRQRQRHRLSGAGPSSGNLDLEDGGGYFDEDEHKA---------------------------------------------------------------------------------------------------------------------------QAKPGDHVKSLLISCASSPVGAAISERLPGLVTWLHQQPPQTLWTAAIAYLALVHLLAGYKA 437          
BLAST of mRNA_Ecto-sp13_S_contig11179.1037.1 vs. uniprot
Match: A0A6H5L1J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1J2_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 8.190e-138
Identity = 364/612 (59.48%), Postives = 377/612 (61.60%), Query Frame = 1
Query:    1 QSEKEHAQTLAAAAAAHERSALALSETRGALSEAESAAQVAAWESKSLREELEGLRERSEELSSELEAARSREATATRTAREGVGAELEGLRGAVGAAEAAREQAEEGLARLKEKKKRDLQEVRRLNERMMELQQARREEVSDVEGSLQELRAKTGELEHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------DPRREEREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQAEDAKDISTAALGRANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALKQAAAATAGGAAETNTMDSGSVAGFSTPLRDLSEVAPPSQPPMSADPPMRQRQRHRLSGAGLSSGNLDLEDGGGYFDEDEHKARFRSLSSSIKF*LFEAVYLRHRRGDGMESFICSSGWGWLLVE*LTEPPPPHCGQWQNH*AKKQKNXXXXXXXLCAKQSLEPHLVLVCLFVRTRRCKPKKVCFPRSCWLLLSATAVVMHG*SQAQAKPGDHVKSLLISCASSPVGAAISERLPGLVTWLHQQPPQVCHGRTNACIAEIVVVCG 1647
            +SEKEHAQ LAAAAAAHERSALALSETRGAL      AQVAAWESKSLREELEGLRERSEELSSELEAAR+REA ATRTAREGVGAE+EGLR AVG AEA REQAEEGLARLK+KKKRDLQEVRRLNERMMELQQARREEVSD+EGSLQELRAKTGEL HA                 XXXXXXXXXXXXX                                                               D RR+EREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQAEDAKD+STAALGRANA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AALKQAAAAT G A ETNT DSGSVAGFSTPLRDLSE  PPSQPPMSADPPMRQRQRHRLSGAGLSSGNLDLEDGGGYFDEDE+KA                                                                                                                           QAKPGDH+KSLLISCASSPVGAAISERLPGLVTWLHQQPPQ       A +A + ++ G
Sbjct: 1300 ESEKEHAQNLAAAAAAHERSALALSETRGALXXXXXVAQVAAWESKSLREELEGLRERSEELSSELEAARAREAAATRTAREGVGAEIEGLRRAVGTAEAGREQAEEGLARLKDKKKRDLQEVRRLNERMMELQQARREEVSDLEGSLQELRAKTGELGHALAKALSEKDHLQQAATAXXXXXXXXXXXXXXXXXXXXXXXXXPIPSEGTIPVPAGDPNPRPQEPRQEEQHQCGGAREEMVRVGEGLRSEERGGDQRRDEREKELSLLRKLVEKLQREVEGLKSDLEEESTGRSQAEDAKDVSTAALGRANARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAALKQAAAATVGRAVETNTTDSGSVAGFSTPLRDLSEGPPPSQPPMSADPPMRQRQRHRLSGAGLSSGNLDLEDGGGYFDEDENKA---------------------------------------------------------------------------------------------------------------------------QAKPGDHIKSLLISCASSPVGAAISERLPGLVTWLHQQPPQTLWTAAIAYLALVHLLAG 1788          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11179.1037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJX5_ECTSI9.110e-17064.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1J2_9PHAE8.190e-13859.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11179contigEcto-sp13_S_contig11179:57..5313 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1656
Hectar predicted targeting categoryother localisation
Exons6
Cds size750
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11179.1037.1prot_Ecto-sp13_S_contig11179.1037.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11179 1494..4794 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462581.759636-UTR-Ecto-sp13_S_contig11179:56..4191681462581.759636-UTR-Ecto-sp13_S_contig11179:56..419Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11179 57..419 +
1681462581.769623-UTR-Ecto-sp13_S_contig11179:1469..14931681462581.769623-UTR-Ecto-sp13_S_contig11179:1469..1493Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11179 1470..1493 +
1681462581.8263888-UTR-Ecto-sp13_S_contig11179:4794..53131681462581.8263888-UTR-Ecto-sp13_S_contig11179:4794..5313Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11179 4795..5313 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462581.7793891-CDS-Ecto-sp13_S_contig11179:1493..15981681462581.7793891-CDS-Ecto-sp13_S_contig11179:1493..1598Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11179 1494..1598 +
1681462581.7889931-CDS-Ecto-sp13_S_contig11179:2359..25391681462581.7889931-CDS-Ecto-sp13_S_contig11179:2359..2539Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11179 2360..2539 +
1681462581.7977881-CDS-Ecto-sp13_S_contig11179:3084..32001681462581.7977881-CDS-Ecto-sp13_S_contig11179:3084..3200Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11179 3085..3200 +
1681462581.8072467-CDS-Ecto-sp13_S_contig11179:3987..41421681462581.8072467-CDS-Ecto-sp13_S_contig11179:3987..4142Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11179 3988..4142 +
1681462581.8166296-CDS-Ecto-sp13_S_contig11179:4600..47941681462581.8166296-CDS-Ecto-sp13_S_contig11179:4600..4794Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11179 4601..4794 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11179.1037.1

>prot_Ecto-sp13_S_contig11179.1037.1 ID=prot_Ecto-sp13_S_contig11179.1037.1|Name=mRNA_Ecto-sp13_S_contig11179.1037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp
MMELQQARREEVSDVEGSLQELRAKTGELEHALAQEEQHQGGRAREEVVR
GGEGLRSEERGDDPRREEREKELSLLRKLVEKLQREVEGLKSDLEEESTG
RSQAEDAKDISTAALGRANARIAELTSKSAQLTRARSAMVAQINALEEQL
NSAALKQAAAATAGGAAETNTMDSGSVAGFSTPLRDLSEVAPPSQPPMSA
DPPMRQRQRHRLSGAGLSSGNLDLEDGGGYFDEDEHKARFRSLSSSIKF*
back to top

mRNA from alignment at Ecto-sp13_S_contig11179:57..5313+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11179.1037.1 ID=mRNA_Ecto-sp13_S_contig11179.1037.1|Name=mRNA_Ecto-sp13_S_contig11179.1037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5257bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11179:57..5313+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGTCGGAGAAGGAGCACGCACAGACCCTCGCCGCCGCCGCTGCCGCCCA CGAGCGATCCGCGCTGGCTCTTTCGGAGACGCGGGGCGCTCTCTCTGAGG CCGAGAGCGCGGCACAAGTGGCGGCATGGGAGAGCAAGTCCCTTCGCGAG GAGCTGGAGGGTCTCCGGGAACGTTCCGAGGAACTGTCCTCGGAGCTGGA GGCGGCGCGGTCGAGGGAGGCGACTGCGACGCGGACTGCGAGGGAGGGGG TCGGGGCGGAGCTGGAGGGGCTCCGTGGGGCGGTCGGCGCGGCGGAGGCC GCGAGGGAGCAGGCGGAGGAGGGCCTGGCCCGCCTTAAAGAGAAGAAGAA GAGGGACCTACAGGTGTGATGACGTCGCGGTAGTCGTGGTGGTGGTTAGG GCGGGGGGTTGGTATTGGGTCGTGTTGGTAGGTTGGAAGTGGTATTTGTT AATGGTGGTGGTGGTGTTGAAACAGGTAATGGTTTGTGGTGATGTGGTAG TGTTGGCATGGTACATGAACAAAAGCACTGGTACCCTCCCCCGTCCCCAT GCTGGGTATATGAAGGGTCATCCCTTGTTGCTCACTGTCGAGAGGATATC GATAGAAAAGTACTGAAACGTTCTCGCTACACACCGGTGATAACATCGGT CCGTTTTTTTCCCGCCCTACTTCTTGCCCTCTTTTGAGTTCCCCAAATAT CCGAACCCGGCTATCGGCACGAAGGTGCTTGTTGAGATCTTCCCGATCTG TAGAAGCCCCCTGTGCATCCATTCCAGTCGTGGCTTCAAACCACAGTTTT GCTCACTCACGCCTTGTCCCAACGTGCACTACATCACCATAGCTTGCGGC GTCGAGGTGCCCTCGGATGGACACAGAACGAAAGAGCGTGCTGTTCCCGT TGTAAAGGACGTGCTACCTCAAAGCCCCCCGGTTGCCAGTGCTTAGGTCT GTCCCAACCTTGCGTGCCTGTCGTGTCTGAGCTTATCCATTTGGTGCGTC CCTCTGTGGCATTCTTTAGCGGTAGTGGAACGAGTTTAGGAGGGCCCTGT TTATCAGTTGTCGATGCCCTGCATAGCGACCACAACATAGCGTGGCACCG CTGCTGCACCCCGACTAATACATGTAGCCGCTATAGCGACCTAGGCCCTG AATAGCGACCGCATTACCTCCTGACGCTGGGGTCGCCAATCCGCGCCCAT CCACTGCCATCTAATAGATTATCTACATGTAACCCGATTGCTGCCTCGGG CCCTTATCCACAAGACCCCATTGCTCATTGGTTGCCCTCGGCTGCGCCGA AGTGCGGCGGAACAACTCTGCTCCTCGCACTGTTTTGGTTCCCTTCCGTT TTCATCCCCTTTCCTTCCTTCCTTTCGTCCACGTTCCAATTGTTTGCGTA TGTTTCATTCCAGGAAGTACGGCGGCTGAATGAACGCATGATGGAGCTGC AGCAGGCTCGCCGCGAAGAGGTCTCTGATGTCGAGGGCTCGCTGCAGGAG CTGAGGGCCAAGACGGGCGAGTTAGAGCACGCCCTTGCGCAGGTATTTCA CTCGGAAAAACGAGGAGGTCATCGGCGTCGGTTGTGCCAGTACCGACGTC GGGAGGTACTGGGCAGAGACCGGAACGGTTTTTGTGGACACGAAGTACTC TTGTGATTCATTGCAATTGTTATTGATTCGTTTCATCTCGCCTTGTGTCT TGGTATTGTGAATTCCTTTCCCGGGTTTCTTGCGTTGCCTGTGCTAGCTG TTTTTGTTGCACGGTGATGTGCAGGCTGGCCCTTGCTGCGGTGCTGAGGT TCTCTCTGTCATTGTTTGTGTTCACAAGGAGTTTTCGTGTGCCGTAGCGG CTACGGCTTCAGAGAGAGCCCGGACAAGGCAGTAACAGTCTCCTTTATCC GGTACTCTTAGACAGTATTCAGAGGGTACAAATTTTGTATGCGTAATACT TCGAATTACATGTGCTGGTCATGGCCTCGACAAGCCACTTGTTTTTGCTC CCTTGCCGCCATATTTTCTCTTCAACAATCTCTCGAACTCCACTTTTTTC TTGAACAATCTCTCCAAACCCGCAACCGCTGCTACTGCTGTACTTGACAC GAAAACAGGCGCTGAGCGAGAAAGACCACTTGCAACAGGCTGCCACCGCC GCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCCGCTGCTACCGGTGG TGGCGACAAGTCCCAGTCATCTTCGTCGTCCCCCATTCTATCCGAGGGCA CTATTCCGGGACCCACGGGCGACCCCAACCCTCGCCCTCAAGAACCCCAA CAGGAGGAACAACACCAAGGCGGTCGTGCGCGTGAGGAAGTGGTGAGGGG AGGGGAGGGCTTAAGATCGGAGGAGCGCGGCGATGATCCGCGCCGCGAGG AGCGAGAGAAGGAGTTGTCGCTGCTGCGGAAGCTTGTCGAGAAGCTGCAG CGGGAGGTGGAGGGGCTCAAGTCTGACCTTGAGGTGAGTTGCAGTGAAAA CCCATGGTATGCGTTTGGCCTCGGAGGGGACCGATGTAGTGGGTGTTGTT GGTCGTACACGCTCGGAGTGGGAGGTGGGGACGGCACACGTGTGGATGTG TTTTTGTTATTTGCATCGACCGCGCTAGCTGGCTGACCAATGACAAGACG TCACTCAGTGCAGTTGAAAACACGAAATGCTTGGAAAGGACATGATCTGG GACCCCGTGAGGGGACGTCATGGGGGAATGTGTGTGTGTTTTTGTTTCTG TGCGTTTTGCAGAGGGTTCAATGCCGAGGGCGAGGGGAAGGCATCGGAGA TATCGGAGATGTCTCAAAGGCTGTTGTTCACTATGGTATCCGATACACAC ACCCTAGCATGTTTGGGTTTTTATTCTTGCTTTATACAATCCTGGCGTAG TTTCACTGGTCAGCCGGATAGGGCGGTCGACATTACACTAAAAAACGTAC ACACGTGACATGTCCTGCGGATTACTTTATCCTTGTGTTGGTGCCCCTCT ACCCCCCATTTTTCTTTTTGTTGTCCAGGAGGAGTCTACAGGTCGAAGTC AAGCCGAAGACGCGAAAGATATCTCGACGGCCGCTCTTGGCAGGGCTAAC GCAAGGATCGCCGAGCTCACGTCCAAGTCTGCTCAGCTGACCAGGTAAAG CCCCCTGCTGCCGCTTCTCAACCGGTGTTACTACTGCTGTTGTTGGCCGG CACTCGTGTTTGATGAGTTCAGATTACTCTTTGCTTGGATTTGTCTTGCA TATCTCAGGAGGAATCAGTAGAGAGGACGTGTGTGTGCGTTCGTCTCAGC CATGCTGGCGCCAGTCTCAGCTTCTCGGAAAGGAAGAAGAAGCTGCAAAA CCTACGAGGGGTAGGTCTACACGAGGATTGGTGTCGGAATGCTGTAGTCG TATAGGGATAAAAACCGGTAAGTTGTACATGATCAGCATTACCATCATCA TCCCCGTCGAAGACAAGAACTGGAGCCAAGTGTAAAACACCAACGACGAC GAGGACGTAGCAGCACCACGTGTACACTATTGAGTCGATGTCTTGGGGGA GGCTGTTTCGTTGAAGCGTCGTCTATAGATCGTCAGCACGGACGGTAGCA GCTTCTGGGGCCGACCCACAAAAGTGGGTGTCTTGGTGTGCGAGTCGCGA GAACTGCTGTGGTTGCCCTGGTACCCGTCCCGCTCGATGAGATAACTCGA TCTCTCTTGATACATCCGTGAACAGCAGTCAGCAGTCAATTGCACAAGGT AGGGTAGGAGGGACTAACCCACCGCATTCCTTTTCTTCCTACGGTCATAA TCCTGCCAAACGCCCTACAACGCGCTGACTTTTTCTTTCGTTCTTCTCTT GTACATCCGTCCTCTCTCTCTGTTCTTGATCCGTCCTCTCTCTCTGTTGG CGACCAACACCCCGACATCAAAACCTGTCAGAGCACGCTCGGCGATGGTG GCTCAGATCAACGCTCTTGAAGAGCAGTTGAACTCCGCCGCACTCAAACA GGCCGCCGCTGCCACCGCGGGCGGAGCCGCCGAGACTAACACGATGGACA GCGGCTCCGTTGCCGGCTTCTCAACGCCCTTGCGAGGTAAACAGCAGCTT GTTTTGTCTTTATGATACGCTTTTCCTTTTTTTTTTCTTGTCTGCTGAAC GCGTTGGTTGGATCACAGTGAAAGTCGCCGCAGCATTCGTGGATGAAAAT TTGCAGGATGTAGGGATCGATCGTGACGGGTTGAGAACATCAGACGGAAC GTGATCAAAACAAGCATAGCACTTTTTGCGCGGAGAAGCTTTTTGGGCAA AAAAGTGTCAAATCCCGTACGCATGCGGCGCCGCAGCTACGCTCCCCTAT CTTGCCGTTCTTTTGCCATTTCTTTCTTTCATTTCCTCCTTTGCTTCTCG CGTCCCTCTTCTTCCGTTCTTTTTCCTTTCCTTTTCCGAGGTCGATGTTT CCGATCGTCTCTCTCGTACTGTCCTTTCATCCCGATTGTTTTGTTCTTAT TTCCATTTCCTATCCTTCTTTGCGTCTGTTGCCCCTGTCTTTAGATTTGT CCGAGGTAGCGCCTCCGAGTCAACCGCCGATGAGCGCCGACCCTCCCATG CGGCAACGCCAGCGGCATCGCCTGAGCGGGGCAGGCCTTAGCAGCGGCAA CTTGGACTTAGAAGATGGTGGTGGATACTTTGACGAGGATGAACACAAGG CAAGATTTCGCTCCTTGTCTTCGTCCATAAAATTTTGATTGTTTGAAGCG GTTTATCTGAGACATAGAAGGGGAGATGGGATGGAGAGCTTCATTTGTTC ATCGGGGTGGGGGTGGTTGCTGGTCGAGTGACTCACGGAGCCCCCCCCCC CCCATTGTGGTCAATGGCAAAATCATTAAGCAAAGAAACAAAAAAACAGC CCCCCCCCCCCCCCCCCATTGTGCGCGAAGCAAAGCCTAGAACCACACCT TGTTCTGGTGTGCCTGTTTGTGCGTACACGACGATGCAAACCTAAGAAAG TATGTTTTCCACGCTCTTGTTGGCTGTTGCTGTCTGCGACTGCTGTGGTT ATGCATGGTTGATCTCAGGCACAGGCCAAGCCTGGTGACCACGTCAAGTC CCTGCTCATCTCCTGCGCTTCGAGCCCGGTGGGAGCGGCCATCTCCGAAA GACTACCCGGGCTAGTCACCTGGTTGCACCAACAGCCCCCGCAGGTGTGT CACGGGCGAACGAATGCATGCATCGCAGAAATCGTCGTTGTTTGCGGTTT AACTGCA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11179:57..5313+

>mRNA_Ecto-sp13_S_contig11179.1037.1 ID=mRNA_Ecto-sp13_S_contig11179.1037.1|Name=mRNA_Ecto-sp13_S_contig11179.1037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11179:57..5313+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGAGCTGCAGCAGGCTCGCCGCGAAGAGGTCTCTGATGTCGAGGG
CTCGCTGCAGGAGCTGAGGGCCAAGACGGGCGAGTTAGAGCACGCCCTTG
CGCAGGAGGAACAACACCAAGGCGGTCGTGCGCGTGAGGAAGTGGTGAGG
GGAGGGGAGGGCTTAAGATCGGAGGAGCGCGGCGATGATCCGCGCCGCGA
GGAGCGAGAGAAGGAGTTGTCGCTGCTGCGGAAGCTTGTCGAGAAGCTGC
AGCGGGAGGTGGAGGGGCTCAAGTCTGACCTTGAGGAGGAGTCTACAGGT
CGAAGTCAAGCCGAAGACGCGAAAGATATCTCGACGGCCGCTCTTGGCAG
GGCTAACGCAAGGATCGCCGAGCTCACGTCCAAGTCTGCTCAGCTGACCA
GAGCACGCTCGGCGATGGTGGCTCAGATCAACGCTCTTGAAGAGCAGTTG
AACTCCGCCGCACTCAAACAGGCCGCCGCTGCCACCGCGGGCGGAGCCGC
CGAGACTAACACGATGGACAGCGGCTCCGTTGCCGGCTTCTCAACGCCCT
TGCGAGATTTGTCCGAGGTAGCGCCTCCGAGTCAACCGCCGATGAGCGCC
GACCCTCCCATGCGGCAACGCCAGCGGCATCGCCTGAGCGGGGCAGGCCT
TAGCAGCGGCAACTTGGACTTAGAAGATGGTGGTGGATACTTTGACGAGG
ATGAACACAAGGCAAGATTTCGCTCCTTGTCTTCGTCCATAAAATTTTGA
back to top