mRNA_Ecto-sp13_S_contig11178.1036.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: A0A6H5K1H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H5_9PHAE) HSP 1 Score: 546 bits (1408), Expect = 7.320e-190 Identity = 314/358 (87.71%), Postives = 330/358 (92.18%), Query Frame = 1
Query: 1 MMRARRRGVVGILIATYNRVPFCSALVVPSTAAAPATTSQLRHNKSMMMLGGRRQSVQVLLQSSPYHVPSLLSARKVSRDTSPRCHLHRRRGQPSPPRVRYRFSSSASPTAGGAAASMRTAAAADTSESAADNTWNLYDNTKCPPVPVSLVEYISLGPRYQERQQRMDKKEVPMSATKTSKHDXXXXXXXXXXXXXXXXADADDEHAQEDWLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
MMRARRR GIL+A YNR+PFCSAL VPSTAAAPATT QLR+N +MMMLGGRR+SVQVL QS+PYHVPSL SA KVSRDTSPRCHL RRGQPSPPRVR+RFSSSASPTAGGAAA +RTAAAADTSESAA NTWNLYDNTKCPPVP+SL+EY+SLGPRYQERQQRMDK EVPMSATKTSKHD XXXXXXXXXXXXX ADADDEHAQEDWLSAAAD+AASLG+DPL STEAQHRRIFHLYLPVYFWLKLLLRQSRGSAA XXXXXXXXX A VAAGV TAN+HPR SRGDVSKR+RASSNTGS+K PPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ
Sbjct: 1 MMRARRRRAAGILLAAYNRLPFCSALAVPSTAAAPATTGQLRNNSTMMMLGGRRRSVQVLWQSAPYHVPSLPSAHKVSRDTSPRCHLQMRRGQPSPPRVRFRFSSSASPTAGGAAACIRTAAAADTSESAAGNTWNLYDNTKCPPVPMSLMEYVSLGPRYQERQQRMDKTEVPMSATKTSKHDDSXXXXXXXXXXXXX-ADADDEHAQEDWLSAAADIAASLGVDPLKSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAAXXXXXXXXXXX--ARDVAAGVQTANEHPRSSRGDVSKRARASSNTGSDKGPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 355
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: D8LG59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG59_ECTSI) HSP 1 Score: 258 bits (659), Expect = 5.210e-79 Identity = 158/187 (84.49%), Postives = 164/187 (87.70%), Query Frame = 1
Query: 520 MSATKTSKHDXXXXXXXXXXXXXXXXADADDEHAQEDWLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAW--GVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
MSATKTSKH+ XXXXXXX DADDEHAQEDW SAAADLAASLGIDPLTSTEAQHRR+FHLYLPVYFWL+LLLRQSRGSAAS XXXXXXXXXXX GVAAGVPTAN HPR S GDVSKR+RA SN+GSNK+PPVVVGINAPQGCGKTTIVSEMQRMLE AGH CVVMSIDDFYLTG EQ
Sbjct: 1 MSATKTSKHNDSAQHQXXXXXXX---GDADDEHAQEDWRSAAADLAASLGIDPLTSTEAQHRRVFHLYLPVYFWLELLLRQSRGSAASXXXXXXXXXXXXXXTRGVAAGVPTANTHPRSSGGDVSKRARARSNSGSNKEPPVVVGINAPQGCGKTTIVSEMQRMLENAGHHCVVMSIDDFYLTGTEQ 184
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: A0A0G4FG08_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FG08_VITBC) HSP 1 Score: 90.9 bits (224), Expect = 1.520e-16 Identity = 56/148 (37.84%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 631 WLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
W+ L+ LG + + AQ RIFH YLPVYFW+ ++ R A G+ + A P PS GDV R G+ ++VG +APQGCGKTT+V+ ++ + E+ G C V+SIDDFYLTG EQ
Sbjct: 90 WMDRGKLLSDDLGYEWSALSTAQAARIFHYYLPVYFWIHSFCKRKR----------------EAGGLQ--MTAAPAAPAPSGGDVGTAGRPMKGEGA-----LLVGFSAPQGCGKTTLVTFLKTLFEQEGLTCTVVSIDDFYLTGEEQ 214
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: A0A1Y1INT7_KLENI (D-glycerate 3-kinase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INT7_KLENI) HSP 1 Score: 88.2 bits (217), Expect = 1.320e-15 Identity = 48/148 (32.43%), Postives = 62/148 (41.89%), Query Frame = 1
Query: 631 WLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
W+ + LG DP EAQ RIFH YLP +FW + L Q R +P PP+V+GI+APQGCGK+TIV E+ + E G C +S+DDFYLT +Q
Sbjct: 135 WVDLGVKVCTDLGFDPAALDEAQKSRIFHYYLPTFFWCRAQLEQHRQRHEAPDGA-------------------------------------------SPPPLVIGISAPQGCGKSTIVEELTSLFEYVGSHCAGISLDDFYLTAVDQ 239
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: A0A7R9TRT6_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TRT6_MICPS) HSP 1 Score: 82.0 bits (201), Expect = 2.310e-14 Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 1
Query: 628 DWLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
+W++ A+L LG D + +AQ R + YLPVY W + + + +P +RSR + PP+VVG++APQGCGKTT+VS + ++LE+ G + +SIDD YLTGAEQ
Sbjct: 87 EWIALVAELCDVLGFDAHSMDDAQASRTYRYYLPVYLWTEARILAHVDAYQTP----------------------------------QRSR-------DPPPPLVVGLSAPQGCGKTTVVSTLVKLLERRGTRAASLSIDDVYLTGAEQ 194
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: C1N2V1_MICPC (Glycerate kinase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N2V1_MICPC) HSP 1 Score: 82.0 bits (201), Expect = 1.060e-13 Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 1
Query: 628 DWLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
+W++ A+L LG D + +AQ R + YLPVY W + + + +P +RSR + PP+VVG++APQGCGKTT+VS + ++LE+ G + +SIDD YLTGAEQ
Sbjct: 48 EWIALVAELCDVLGFDAHSMDDAQASRTYRYYLPVYLWTEARILAHVDAYQTP----------------------------------QRSR-------DPPPPLVVGLSAPQGCGKTTVVSTLVKLLERRGTRAASLSIDDVYLTGAEQ 155
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: C1DYY5_MICCC (Glycerate kinase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DYY5_MICCC) HSP 1 Score: 79.3 bits (194), Expect = 7.620e-13 Identity = 53/158 (33.54%), Postives = 74/158 (46.84%), Query Frame = 1
Query: 613 EHAQED----WLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
E+A +D W S AA L L ++ + AQ R++ Y+PVY W L R SA++P G A PP+VVG++APQGCGKTT+V+++ R+L+ G + +SIDD YLTGAEQ
Sbjct: 35 ENATDDVVDRWTSVAARLCDQLSLEQASLDPAQASRVYRYYMPVYLWCLARLEAHR-SASAP-------------GAAC-------------------------------PPLVVGLSAPQGCGKTTLVAQLTRLLDADGVRAASVSIDDVYLTGAEQ 147
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: A0A7S0NN41_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NN41_MICPS) HSP 1 Score: 79.0 bits (193), Expect = 9.810e-13 Identity = 54/158 (34.18%), Postives = 74/158 (46.84%), Query Frame = 1
Query: 613 EHAQED----WLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
E+A +D W S AA L L ++ + AQ R++ YLPVY W L R S ++P GVA PP+VVG++APQGCGKTT+V+++ R+L+ G + +SIDD YLTGAEQ
Sbjct: 93 ENATDDVVDRWTSVAARLCDQLSMELASLDPAQASRVYRYYLPVYLWCLARLEAHR-SVSAP-------------GVAC-------------------------------PPLVVGLSAPQGCGKTTLVAQLTRLLDADGVRAASVSIDDVYLTGAEQ 205
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: D8RPL1_SELML (PRK domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RPL1_SELML) HSP 1 Score: 78.6 bits (192), Expect = 1.270e-12 Identity = 49/159 (30.82%), Postives = 68/159 (42.77%), Query Frame = 1
Query: 601 DADD-EHAQEDWLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
DA+D +W+ L+ LG L +E++ R++H YLPVY W K L + RG N G P +V+GI+APQGCGKTT+V ++ M +G +SIDDFYLT A+Q
Sbjct: 26 DAEDVRRDMNEWIEMGLRLSRILGFRELMLSESEKTRVYHYYLPVYMWCKRELERHRGRF--------------------------------------------NDGDKPIPALVIGISAPQGCGKTTLVDALEYMFNYSGRTAASVSIDDFYLTAADQ 140
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Match: UPI000D1CD0E2 (D-glycerate 3-kinase, chloroplastic isoform X1 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CD0E2) HSP 1 Score: 78.6 bits (192), Expect = 2.160e-12 Identity = 49/159 (30.82%), Postives = 68/159 (42.77%), Query Frame = 1
Query: 601 DADD-EHAQEDWLSAAADLAASLGIDPLTSTEAQHRRIFHLYLPVYFWLKLLLRQSRGSAASPXXXXXXXXXXXAWGVAAGVPTANKHPRPSRGDVSKRSRASSNTGSNKKPPVVVGINAPQGCGKTTIVSEMQRMLEKAGHQCVVMSIDDFYLTGAEQ 1074
DA+D +W+ L+ LG L +E++ R++H YLPVY W K L + RG N G P +V+GI+APQGCGKTT+V ++ M +G +SIDDFYLT A+Q
Sbjct: 95 DAEDVRRDMNEWIEMGLRLSRILGFRELMLSESEKTRVYHYYLPVYMWCKRELERHRGRF--------------------------------------------NDGDKPIPALVIGISAPQGCGKTTLVDALEYMFNYSGRTAASVSIDDFYLTAADQ 209 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11178.1036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11178.1036.1 >prot_Ecto-sp13_S_contig11178.1036.1 ID=prot_Ecto-sp13_S_contig11178.1036.1|Name=mRNA_Ecto-sp13_S_contig11178.1036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp MMRARRRGVVGILIATYNRVPFCSALVVPSTAAAPATTSQLRHNKSMMMLback to top mRNA from alignment at Ecto-sp13_S_contig11178:4423..5496+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11178.1036.1 ID=mRNA_Ecto-sp13_S_contig11178.1036.1|Name=mRNA_Ecto-sp13_S_contig11178.1036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1074bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11178:4423..5496+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11178:4423..5496+ >mRNA_Ecto-sp13_S_contig11178.1036.1 ID=mRNA_Ecto-sp13_S_contig11178.1036.1|Name=mRNA_Ecto-sp13_S_contig11178.1036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1074bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11178:4423..5496+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |