mRNA_Ecto-sp13_S_contig1117.1026.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1117.1026.1
Unique NamemRNA_Ecto-sp13_S_contig1117.1026.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: D8LCP4_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP4_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 3.240e-195
Identity = 397/813 (48.83%), Postives = 443/813 (54.49%), Query Frame = 1
Query:    1 MFGHMPKTSMLASRKFDLPANEALRSTTMPKHYTSASFGRLLSLAGRRLRLRVAHFDSVLGAIIENSGLILAPNLQQERVRQLLSNTSGRFFHALGLAPIRQPIGAMFPIPRDLRRVVLLAPKSGLSLLREFTQPELYLALAGTLEPFENFFVSVHTVFVRVRRGGK*RGQEDLDGWRSLNSHLMVRDTREQDPMAKLMVSVMVPSFALMMAPPAFTELQLRPRDGIEMYQAPKSVMRRLGGYFNKHFFKATRDNADKTAVLIPGATGDILHGGVSPPHFSCPDRVACPDRYSSHRRPQWEEKVKRSTRTASWTAMPQSTRRWSS*NRPEVTVGTPGWCTA*HWSWLTTRHASALRQEGHQPSRRCMI----LALCGWRWGKGLATRPVCHFRSSEGVCKWSTASAR---ET*FTPYPPSGSPSTFRWHGRGSTSKE*KRRFCR--------RCLLGLP-PFLFHHCRGWTSRLSGPTKRSWAASRSRRRKGPCGRSSPRLPQRSSIRCS----------LG*RRFSPS-------LP----------------RLATIMTKPTPHHGSTPGYA----------SRRSDGMTNPLCGCG*MRFSWTPR----GSYYRLLRDAGGQNRQRSVHPARHRPGT--------GRHPRTRCRYPLPKGGFWGSGSVGVIAPCGRRTRPANVRPHRRLHIPDAGLFRPDP-------M*LRNGQRLTPGFVESMRSANAMGLVPLQTCFHRAALSPLFPAHEKLSTQFPASGTAADGSRKCA*CGKSGKSLQCSRCRKVSYCSKECQRRDWKSHKPSCR 2205
            MFGHMPKTSM A+RKFD PANE LRS TMPK+YTS SFGRLLSLAGRRLRLRVAHF SVLGAII NSGLILAPNLQQE++           FHALGL PIRQ  G M PIP DLRR+VLL PKSGLSLLREFTQPELYLALAGTLEPFENFFVSVHT FVRVRRG K RGQEDLDGWRSLNSHLMVRDTREQ P A+LMVS MVPSFALMMAPPAFTELQLRPRDGIEMY+APK V+RRLGGYFNKHFFKAT  NADKTAVLIPGATG ILHGGVS   FSCPDRVACPDR          + ++ S RT    +    T R+                   H      +    + Q G       ++    L +      +GLA        +    C    A           P+P            R    +E  +R           R  L LP  ++    +G   R   P+  SW               SP +P  S  R            +G   F+P+       LP                 +  I++    HH      +          +RR D    P        + W        +   L+ D       R    A  + GT        GR    R    +       SG V +         PA V   R+ +   A      P            G+ L PGFVESMRSA A GLVPL TCFHRAALSPLFPAHEKLSTQFPASGTAADGSRKCA CGKSGK LQCSRCRKV+YCSKECQRRDWKSHKPSCR
Sbjct:    1 MFGHMPKTSMTATRKFDRPANEVLRSATMPKYYTSVSFGRLLSLAGRRLRLRVAHFHSVLGAIINNSGLILAPNLQQEQIA---------VFHALGLVPIRQHFGPMLPIPGDLRRLVLLVPKSGLSLLREFTQPELYLALAGTLEPFENFFVSVHTAFVRVRRGSKYRGQEDLDGWRSLNSHLMVRDTREQAPEAELMVSAMVPSFALMMAPPAFTELQLRPRDGIEMYRAPKDVLRRLGGYFNKHFFKATLGNADKTAVLIPGATGGILHGGVSTRRFSCPDRVACPDR----------DLLRPSPRTGRCLSKAVDTHRFM------------------HGDAAIDQTVELVEQAGSNSGDARLVYRVTLVMANDEAREGLAAGGAPVLETLHDPCSVQVALGEGLSHAVSLPFPIE----------RRRVQREYSKRQGYVIYTVPPIRLPLNLPLAWIGLDIKG-VGRAVLPSMPSW---------------SPAVPLSSLPRLDFQAEWAHEKVMGGFSFTPAERSMREGLPTPNSEIIDPVILGLKEEILAIISTACDHHEEAHASSWKHPWMCITENRRDD---EPAL------WVWVNEILLDSTNEALILDCCVMLADRMDSAASIQLGTALELEEIQGRGAGIRFSKAV-------SGEVALWGSL----LPAAVERARQTYAHTADCIYSTPGYSGRTLCSCGMGKDLPPGFVESMRSAKAPGLVPLHTCFHRAALSPLFPAHEKLSTQFPASGTAADGSRKCAQCGKSGKPLQCSRCRKVAYCSKECQRRDWKSHKPSCR 730          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: A0A6H5JFV6_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV6_9PHAE)

HSP 1 Score: 592 bits (1525), Expect = 1.130e-194
Identity = 397/787 (50.44%), Postives = 452/787 (57.43%), Query Frame = 1
Query:    1 MFGHMPKTSMLASRKFDLPANEALRSTTMPKHYTSASFGRLLSLAGRRLRLRVAHFDSVLGAIIENSGLILAPNLQQERVRQLLSNTSGRFFHALGLAPIRQPIGAMFPIPRDLRRVVLLAPKSGLSLLREFTQPELYLALAGTLEPFENFFVSVHTVFVRVRRGGK*RGQEDLDGWRSLNSHLMVRDTREQDPMAKLMVSVMVPSFALMMAPPAFTELQLRPRDGIEMYQAPKSVMRRLGGYFNKHFFKATRDNADKTAVLIPGATGDILHGGVSPPHFSCPDRVACPDRYSSHRRPQWEEKVKRSTRTASW----TAMPQSTRRWSS*NRPEVTVGTPGWCTA*HWSWLTTRHASALR----------QEGHQPSRRCMILALCGWRWGKGLATRPVCHFRSSEGVCKWSTASARET*FTPYPPSGSPSTF--RWHGRGSTSKE*KRRFCRRCLLGLPPFLFHHCRGWTSR--LSGPTKRSWAASRSRRRKGPCGRSSPRLPQRSSIRCSL----------G*RRFSPSLPRLATIMTKPTPHHGSTPGYA---SRRSDGMTNPLCGCG*MRFSWTPRGSYYR-----LLRDAGGQNRQRS-------VHPARHRPGTGRHPRTRCRYPLPKGG--FWGSGSVGVIAPCGRRTRPANVRPHRRLHIPDAGLFRPDP-------M*LRNGQRLTPGFVESMRSANAMGLVPLQTCFHRAALSPLFPAHEKLSTQFPASGTAADGSRKCA*CGKSGKSLQCSRCRKVSYCSKECQRRDWKSHKPSCR 2205
            MFGHMPKTSMLASRKF LPANEALRS T+ K+YTS SFGRLLSLAGRRLRLRVAHFDSVLGAII+NSGLILAPNL QE++           FHALGLAPIRQPIGAMFPIPRDLRRVVLL PK+GLSLLREFTQPELYLALAGTLEPFENFFVSVHTVFVRVRRGGK RGQEDLDGW SLNSHLMVRDTREQDP A+LMVS MVPSFALMMAPPAFTELQLRPRDGIE++QAPKSV+RRLGGYF KHFFKAT DNADKTAVLIPGATGDILHGGVS P FSCPDRVACPD+ SS   P     ++++  T  +     A+ Q+          +    T G     +   L   +  A +          +  H P    + L       G+GL       F   +   +   +  +       PP   P  F   W G              + +L   PF       W+    LS   +  + A  + +++      S           S             R   P+L      +   + +           + R D   + L G          RG++ R     ++     Q+   S       +HP                     GG   WGS              PA V   R+ +   A    P P            G+ L PGFVESMRSA    LVPLQTCFHRAALSPLFPA+EKLSTQF ASGTAADGSRKCA CGKSGK LQCSRCR VSYCSKECQR+DWKSHKPSCR
Sbjct:  418 MFGHMPKTSMLASRKFHLPANEALRSATLLKYYTSVSFGRLLSLAGRRLRLRVAHFDSVLGAIIDNSGLILAPNLMQEQMA---------VFHALGLAPIRQPIGAMFPIPRDLRRVVLLVPKAGLSLLREFTQPELYLALAGTLEPFENFFVSVHTVFVRVRRGGKCRGQEDLDGWSSLNSHLMVRDTREQDPEAELMVSAMVPSFALMMAPPAFTELQLRPRDGIEVFQAPKSVIRRLGGYFKKHFFKATLDNADKTAVLIPGATGDILHGGVSRPRFSCPDRVACPDQNSSRPSPPMGRGLRKAVDTHRFMHGDAAIDQAVEL------VQQAGSTSGDARLVYRVTLVMANDEARQCLAAGGAPVLETLHDPFSVRVAL-------GEGLGHATGLPFPIEQRRVQMEYSKRQGYVIYTVPPVRQPLNFPLAWTGLDIEGVG-------KAVLPSMPF-------WSPAVPLSSLPRLDFQAEWAHQKEEILAIISTACEHHDEAHASSWKHPWMCITENRRDDEPALWVWVNEILLDSTNEALILDCCVMLADRMDSAASILLGTALELDIIQGRGAHIRFPKVSIVLVVSAQHSLLSAASFCCDIHPV--------------FVKAVSGGVALWGS------------LLPAAVERARQTYAHTADCIYPTPGYSGRTLCSCGMGKDLPPGFVESMRSAK---LVPLQTCFHRAALSPLFPAYEKLSTQFFASGTAADGSRKCAKCGKSGKPLQCSRCRNVSYCSKECQRQDWKSHKPSCR 1139          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 5.260e-65
Identity = 252/766 (32.90%), Postives = 339/766 (44.26%), Query Frame = 1
Query:   46 FDLPANEALRSTTMPKHYTSASFGRLLSLAGRRLRLRVAHFDSVLGAIIENSGLILAPNLQQERVRQLLSNTSGRFFHALGLAPIRQPIGAMFPIPRDLRRVVLLAPKSGLSLLREFTQPELYLALAG--TLEPFENFFVSVHTVFVRVRRGGK*RGQEDL-DGWRSLNSHLMVRDTREQDPMAKLMVSVMVPSFALMMAPPAFTELQLRPRDGIEMYQAPKSVMRRLGGYFNKHFFKATRDNADKTAVLIPGATGDILHGGVSPPHFSCPD-RVAC-PDRYSSHRRPQWEEKVKRSTRTASWTAMPQSTRRWSS*NRPEVTVGTPGWCTA*HWSWLTT----------RHASALRQEGHQPSRRCMILALCGWRWGKGLATRPVCHFRSSEGVCKWSTASARET*FTPYPPSGSPSTFRWHGRGSTSKE*KRRFCRRCLLGLPPFLFHH-CRGWTSRLSGPTKRSWAASRSRRRKGPCGRSSPRLPQRSSIRCS---------LG*RRFSPSLPRLATIMTKPTPHHGSTPGYASRRSDGMTNP-LCGCG*MRFS------WTPR----GSYYRLLRDAGGQNRQRSVHPARHRPGTGRHPRTRCRYPLPKG-GFWGSGSVGVIAPCGRRTRPANVRPHRRL--HIPDAGLFRPDPM*LR-----NGQRLTPGFVESMRSANAMGL-VPLQTCFHRAALSPLF--PAHEKLSTQFPASGTAADGSRKCA*CGKSGKSLQCSRCRKVSYCSKECQRRDWKSHKPSC 2202
            F +     +   T   HYTS SF RLL  AGRRLRL   H+ +VL A++ NSG++LA NL QE++           FHAL LA +R       PIP D RRVVLL PKSGLSLLR F  P +YL++ G  T +PF+N F   H  +VRV RGG   G+    DGWRSLN HL VRD RE DP A+LMVS ++P+ AL++A P+ TELQLRPR+ IE+  APK + +RLGG  +K F+KA   +AD+ AVL PG  G  +    SPP  +CP   VAC PD+ +S    Q    V++ST  A+  A+ ++    S+ ++    +   G  +    ++  T          R A+A      + SR    + +      +  A  P    + S    K+S +        P       + F      +T     R         +P  +F   C   +S      K  W     R+  G    +   +  R               LG      S   +A++    T H    P +        T+P +C     RF       W        S   L+ D       R   P           + R    L  G  F  S +            P  V   R+   H  D     P    L       G+ L    + S+  ANAMG  VP+    +RAA SPL+  P      T    +  +  G  KCA CG  GKSLQC+RCRKVSYCSKECQR+ WK HK +C
Sbjct:  653 FGMTREMIISMATTANHYTSVSFIRLLVGAGRRLRLSATHYRAVLHALMNNSGMMLASNLSQEQMA---------LFHALDLARMRPCDLGSGPIPLDTRRVVLLVPKSGLSLLRHFQLPGVYLSVTGATTQQPFDNHFTCAHMAYVRVHRGGGLGGEGGGGDGWRSLNKHLSVRDAREDDPEAELMVSALLPTIALVLAVPSVTELQLRPRESIEVINAPKDIKKRLGGD-HKVFYKAGISDADRVAVLTPGEAGKSVMAAESPPPLACPQIGVACIPDQATSAYSAQL---VRKSTSEAA--ALHRALHGDSAIDQSVELINQAGRGSDVLLAYKVTLVMANDHARARLAAAEGAPAVELSRDPCSIRVKLEEGLRHTARLPFPVAKRSAMKIKFSKSKGYLCVTAPLLKGPLQAPFSLTVYSNTEGAGHR--------AIPSTVFWPPCAPLSSLPRLDFKAEWIH---RKVMGEFSLTHAEVLMRDEATTQKKGGVDPALLG---LKESFMAIASMAC--THHQDELPVW--------THPWVCISDNHRFDQPAIWLWVNEILLDSSNEALILDCCVMPVARMDDPV--------SAQLRETIELQDGPSFVASKAYPGELALWTALLPVAVERARQTYAHTADCTYASPSDAPLALCDCGRGKDLHSECMHSIELANAMGARVPVHPSVYRAAFSPLYAPPGTSSFVTVAKMAAASVAGPPKCAKCGIGGKSLQCTRCRKVSYCSKECQRQHWKIHKAAC 1371          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 4.080e-61
Identity = 132/256 (51.56%), Postives = 167/256 (65.23%), Query Frame = 1
Query:   64 EALRSTTMPKHYTSASFGRLLSLAGRRLRLRVAHFDSVLGAIIENSGLILAPNLQQERVRQLLSNTSGRFFHALGLAPIRQPIGAMFPIPRDLRRVVLLAPKSGLSLLREFTQPELYLALAGTLEPFENFFVSVHTVFVRVRRGGK*RGQEDL---DGWRSLNSHLMVRDTREQDPMAKLMVSVMVPSFALMMAPPAFTELQLRPRDGIEMYQAPKSVMRRLGGYFNKHFFKATRDNADKTAVLIPGATGDILHGG 822
            E++R+ T P HYTSASF RLL+LAGR+LRL   HF++ L A+I  SGLI+A N+ QE++           FHA+ L PIR P       P D RRVVLL P SGL LLR F+ PE+YL+LAGT   F+N F S+H  FVRVRRG    G  D    +GWRSL+ HL VRDT+  DP A+LM+S +VPSFA  +AP + TE++LRPRD +EM +APK VM ++GG   K FFKA   + D+TA+L PG        G
Sbjct:  643 ESIRALTTPMHYTSASFIRLLALAGRQLRLDTRHFEAALKAMIVGSGLIMASNMMQEQMA---------LFHAMDLIPIR-PSPNEPGAPVDTRRVVLLVPHSGLMLLRAFSLPEIYLSLAGTRGTFDNHFSSLHMGFVRVRRGRSGGGSRDGGNDNGWRSLSDHLCVRDTQSDDPAAELMISALVPSFAFSLAPLSETEVRLRPRDSVEMMRAPKDVMNKMGGMLWKCFFKANLTDKDRTAILTPGGDDPFGESG 888          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: D8LNQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ6_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.130e-27
Identity = 77/162 (47.53%), Postives = 95/162 (58.64%), Query Frame = 3
Query:  927 HRFMDGDAAVDQAVELVEQAGSNSGDARLVYSVTLVMANDEARECLAAGGAPALETLHDPCSVRVALGEGLSHATGLPFPIERRRVQMEYSKRQGNVIYTVPPVRQPLNLPLAWTGLDIEGVEKAVLPSMPSWSPAVPLSSLPRLDFQAEWAHQKVMGGVSF 1412
            H     D  VD ++EL+       G   LVY VTL MA+D AR+ LAAGGA   E     CSV V LG    H T  PFP+++  + ++ SKRQG+ I+TVPP   P  +P+  T L       A LPS   WSP VPL+SLPRLDFQAEW H +VMGG+S 
Sbjct:  565 HHSTRSDFVVDHSIELIRDVWMIEGSG-LVYKVTLRMADDGARDVLAAGGAAVDEKAGGLCSVCVKLGGRFGHFTHFPFPVKKSAINLKVSKRQGHAIFTVPPSGSPAQIPV--TAL-------AGLPSSLFWSPCVPLASLPRLDFQAEWTHGQVMGGMSI 716          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: D8LNQ7_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ7_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 6.690e-22
Identity = 54/95 (56.84%), Postives = 65/95 (68.42%), Query Frame = 2
Query: 1643 HEALIIDCCVMLADRIDSAASIQLGTALELDDIQGRGAGIRFPKAVSGVVALWGSLLPAAAERARQTYAHTADCIYPTPGYSGRTLCSCGMGKDL 1927
            +EAL++DCCVML DR   AAS QLG A+ELD+I G GAG+ F K+  G + LW +LLP A ERARQTYAH ADC +        +LC CG  KDL
Sbjct:   19 NEALVLDCCVMLVDRFGGAASTQLGAAIELDEIHG-GAGVLFAKSYHGELGLWTTLLPVAVERARQTYAHAADCTH-VGAEPPLSLCGCGKAKDL 111          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: A0A0C3JMP1_PISTI (MYND-type domain-containing protein n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3JMP1_PISTI)

HSP 1 Score: 66.6 bits (161), Expect = 1.600e-7
Identity = 40/73 (54.79%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1999 RAALSPLFPAH--EKLSTQF--PASGTAADGSRKCA*CGKSGKSLQ-CSRCRKVSYCSKECQRRDWKSHKPSC 2202
            RAA+SPLF     EK+  Q   P    A  G   CA CGK G  L  CSRCRKV YCSK+CQ +DWK+HK SC
Sbjct: 1121 RAAISPLFAVSYMEKVGMQMDDPVGPPALTG---CAACGKGGAPLSACSRCRKVKYCSKDCQVKDWKTHKTSC 1190          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: A0A0C3AGK5_9AGAM (MYND-type domain-containing protein n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3AGK5_9AGAM)

HSP 1 Score: 66.6 bits (161), Expect = 1.600e-7
Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 1999 RAALSPLF--PAHEKLSTQFPASGTA-ADGSRKCA*CGKSGKSLQ-CSRCRKVSYCSKECQRRDWKSHKPSC 2202
            RAA+SPLF  P  EK  T + ++ +A A     C  CGK+GK+L  CSRC++V YCSKECQ +DWK HK  C
Sbjct: 1121 RAAISPLFFVPYLEKAGTTYGSAPSAKAPTQVGCRTCGKAGKALSVCSRCKRVKYCSKECQVQDWKRHKKDC 1192          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: A0A0D2C189_9EURO (MYND-type zinc finger protein samB n=1 Tax=Cladophialophora immunda TaxID=569365 RepID=A0A0D2C189_9EURO)

HSP 1 Score: 65.9 bits (159), Expect = 2.770e-7
Identity = 54/144 (37.50%), Postives = 65/144 (45.14%), Query Frame = 1
Query: 1822 RRTRPANVRPHRRL-HIPDAGLFRPD--PM*LRNGQRLTPGFVESMRSANAMGLVP----LQTCFHRAALSPLFPA--HEKLS--TQFPASGTAADGSRKCA*CGKSGKS-----LQCSRCRKVSYCSKECQRRDWKSHKPSCR 2205
            R+  PA V   R   H PD         P+ L NGQ L             +  VP    +   F RAALSP FPA   EKL   ++   + T      +C  CGK+        L C RC    YCSKECQR DWK+HKP+CR
Sbjct: 1064 RQVLPAMVERCRTWEHRPDCEYLTESRIPLSLENGQPLLCSCGSGQLPKAFLTGVPHWGSVSKYFVRAALSPCFPAPFSEKLFDFSKINKANTFPHNGSRCRVCGKTESRPGVGLLTCVRCHNAKYCSKECQRTDWKNHKPNCR 1207          
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Match: UPI0004623A1C (uncharacterized protein n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004623A1C)

HSP 1 Score: 58.9 bits (141), Expect = 6.420e-7
Identity = 40/97 (41.24%), Postives = 51/97 (52.58%), Query Frame = 1
Query: 1939 VESMRSANAM-GLVPLQTCFHRAALSPLFPAH--EKLSTQFPASGTA---ADGSRKCA*CGKSGKSL---QCSRCRKVSYCSKECQRRDWKSHKPSC 2202
            VE MR+        PL T   R ALSPLF     E++    P   TA    + + +C+ C K G+     +C RCR V YCSK CQR DWK+HK +C
Sbjct:   18 VEGMRAVELWRDFAPLVT---RIALSPLFAVSYLEQVRAPIPGEDTAEASVNAASRCSRCNKPGRLRDFKKCGRCRIVMYCSKTCQRSDWKAHKLAC 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1117.1026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCP4_ECTSI3.240e-19548.83MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFV6_9PHAE1.130e-19450.44MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNQ8_ECTSI5.260e-6532.90MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FXN8_ECTSI4.080e-6151.56MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LNQ6_ECTSI1.130e-2747.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNQ7_ECTSI6.690e-2256.84MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0C3JMP1_PISTI1.600e-754.79MYND-type domain-containing protein n=1 Tax=Pisoli... [more]
A0A0C3AGK5_9AGAM1.600e-752.78MYND-type domain-containing protein n=1 Tax=Sclero... [more]
A0A0D2C189_9EURO2.770e-737.50MYND-type zinc finger protein samB n=1 Tax=Cladoph... [more]
UPI0004623A1C6.420e-741.24uncharacterized protein n=1 Tax=Trametes versicolo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1117contigEcto-sp13_S_contig1117:8503..13103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2205
Hectar predicted targeting categoryother localisation
Exons6
Ec32 ortholog descriptionZinc finger, MYND-type
Ec32 orthologEc-03_002130.1
Cds size738
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1117.1026.1prot_Ecto-sp13_S_contig1117.1026.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1117 9377..11660 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462580.925478-UTR-Ecto-sp13_S_contig1117:8502..89331681462580.925478-UTR-Ecto-sp13_S_contig1117:8502..8933Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1117 8503..8933 -
1681462580.9385717-UTR-Ecto-sp13_S_contig1117:9275..93761681462580.9385717-UTR-Ecto-sp13_S_contig1117:9275..9376Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1117 9276..9376 -
1681462580.973393-UTR-Ecto-sp13_S_contig1117:11660..119981681462580.973393-UTR-Ecto-sp13_S_contig1117:11660..11998Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1117 11661..11998 -
1681462580.9821134-UTR-Ecto-sp13_S_contig1117:12318..126441681462580.9821134-UTR-Ecto-sp13_S_contig1117:12318..12644Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1117 12319..12644 -
1681462580.991232-UTR-Ecto-sp13_S_contig1117:12832..131031681462580.991232-UTR-Ecto-sp13_S_contig1117:12832..13103Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1117 12833..13103 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462580.9488337-CDS-Ecto-sp13_S_contig1117:9376..95561681462580.9488337-CDS-Ecto-sp13_S_contig1117:9376..9556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1117 9377..9556 -
1681462580.9571443-CDS-Ecto-sp13_S_contig1117:10831..109331681462580.9571443-CDS-Ecto-sp13_S_contig1117:10831..10933Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1117 10832..10933 -
1681462580.9654288-CDS-Ecto-sp13_S_contig1117:11204..116601681462580.9654288-CDS-Ecto-sp13_S_contig1117:11204..11660Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1117 11205..11660 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1117.1026.1

>prot_Ecto-sp13_S_contig1117.1026.1 ID=prot_Ecto-sp13_S_contig1117.1026.1|Name=mRNA_Ecto-sp13_S_contig1117.1026.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp
MDGDAAVDQAVELVEQAGSNSGDARLVYSVTLVMANDEARECLAAGGAPA
LETLHDPCSVRVALGEGLSHATGLPFPIERRRVQMEYSKRQGNVIYTVPP
VRQPLNLPLAWTGLDIEGVEKAVLPSMPSWSPAVPLSSLPRLDFQAEWAH
QKVMGGVSFTPAERSMREELPTPTSEIVDPVFVGLKEIFAIITTACDHHD
EAHASSWKHPWICITEIRRDDEPALWVWVNEILLDSTRLLLSTAA*
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mRNA from alignment at Ecto-sp13_S_contig1117:8503..13103-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1117.1026.1 ID=mRNA_Ecto-sp13_S_contig1117.1026.1|Name=mRNA_Ecto-sp13_S_contig1117.1026.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4601bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1117:8503..13103- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTGGGCACATGCCGAAAACGTCCATGCTCGCGTCACGGAAGTTCGA CCTACCCGCCAACGAGGCCCTCCGTTCGACGACCATGCCCAAACATTACA CGTCGGCGTCGTTTGGTCGGTTGCTGTCGTTGGCCGGGCGCCGACTGCGC CTGAGGGTGGCCCACTTCGACTCGGTACTCGGTGCTATTATCGAGAACAG CGGTCTCATCTTGGCCCCCAATCTGCAGCAGGAACGGGTGAGGCAGCTGC TGTCCAACACGTCCGGACGATGTACGGGTAGCCGAAGTCCAAGCTTTCGT AAGTGTGAAAACGACGGTTTCATGTTGAGAGTACGTGCACCGTTGTTTGC CCACACTGCGCCAATCCGCCCTTAGCACATTTCATTCGAAATTCTTGCTT GATTCGCCAAGGTAATTAACGTCCCCTTATACGTTTCAAATTCGTTCTAC AAATGGCAGTTTTTCACGCACTGGGATTGGCTCCCATCCGCCAGCCTATT GGTGCCATGTTCCCGATTCCGCGCGATCTACGACGAGTGGTTCTGTTGGC CCCCAAGTCCGGCCTCAGCCTCTTGCGCGAGTTCACTCAACCGGAGTTAT ACCTGGCGCTAGCAGGGACTCTAGAACCCTTCGAAAACTTCTTTGTCAGC GTGCACACAGTTTTTGTGCGGGTACGCCGAGGGGGCAAGTAACGCGGTCA AGAGGATCTTGACGGCTGGCGCTCATTGAACAGCCATCTCATGGTTCGGG ATACGCGGGAGCAAGATCCGATGGCAAAGCTAATGGTACGAACATGCGGA AACGAAACACGCACAACACTTTTTTTTTGATACCGCGATCGTTCATACTC GCGATATGTTTCATGAGCGCTGATGCCGAGGCAACCCCAGACATGAGATG CGAACATTGGTTGATCTAATGAAACCGCCTGGAGGGCGGTTTCGACCAAG TAGATGTGGATGTACACGACAATGAGAGTAGAGACGAGGGTTGCAATGTG TAGACCATATCGCGTCCATCAACTTTGAGAAAACATCTTGCTTTTTTGTT TAGGGCAATCTGATTGTCAATATATACATATTCTCTGCGACGGATTCAAC CACAGGTCTCCGTGATGGTGCCCAGCTTCGCGCTAATGATGGCGCCTCCA GCTTTTACGGAGCTGCAGCTGCGGCCTCGAGACGGCATCGAGATGTATCA AGCTCCGAAGAGCGTCATGAGGAGGCTTGGGGGATATTTCAACAAGCACT TCTTCAAGGCCACCCGCGACAATGCCGACAAGACCGCGGTCCTCATTCCT GGTGCAACCGGTGATATCTTGCACGGTGGCGTGTCACCCCCACACTTTTC GTGCCCAGATCGTGTCGCTTGCCCCGACCGATACTCGTCGCATCGTCGCC CCCAGTGGGAAGAGAAAGTAAAGCGGTCGACACGCACCGCTTCATGGACG GCGATGCCGCAGTCGACCAGGCGGTGGAGCTCGTAGAACAGGCCGGAAGT AACAGTGGGGACGCCCGGCTGGTGTACAGCGTAACACTGGTCATGGCTAA CGACGAGGCACGCGAGTGCCTTGCGGCAGGAGGGGCACCAGCCCTCGAGA CGTTGCATGATCCTTGCTCTGTGCGGGTGGCGCTGGGGGAAGGGCTTAGC CACGCGACCGGTCTGCCATTTCCGATCGAGCGAAGGCGTGTGCAAATGGA GTACAGCAAGCGCCAGGGAAACGTGATTTACACCGTACCCCCCGTCAGGC AGCCCCTCAACCTTCCGTTGGCATGGACGGGGCTCGACATCGAAGGAGTA GAAAAGGCGGTTCTGCCGTCGATGCCTTCTTGGTCTCCCGCCGTTCCTCT TTCATCACTGCCGAGGCTGGACTTCCAGGCTGAGTGGGCCCACCAAAAGG TACGTCCATTCACTTGACAGAGGGTCACCCACGGGAAGTGGTCGGTCTAA TTTGGCGTTTGTGCTTGGTGCTCCCTCTGTACGGCGCTCAGATCCAGGCG TCGTGCAATTTTTCTGCAAGAGATTCAGGGTCACCACAACCTTTTTCACG GTGAAATCGCTAATGCTCCCAAAGTAGATGCAGGAACGCCCCGTCTTGGG TTTCCGAAAACTCATGCCGATCGATACCAAACTTTATTGCTGTTCGGTAT GAATCATCCTGTGCTCGAAGGTCATGGGCGGCGTCTCGTTCACGCCGGCG GAAAGGTCCATGCGGGAGGAGCTCCCCACGCCTACCTCAGAGATCGTCGA TCCGGTGTTCGTTGGGCTGAAGGTGATGATGATGGAGGTTTGCCCTGGTT TTGAAGGCGAGCACTCTTTCAGAACGTTTTTGTGGATGAACTTGCTTTAG GCTATACTTTTCAGTCACACGGACTTTTTGGAAACTTGAATAATCTTGTT CCACCTCTCCGGTCTGGCACAAAATGCTTGACGGGCAAGCACTTCATCAA TAGAATTTCGACCGGCGTTCACGATGAACGCGATATTTGTAGTAGACGCT TTCGTACGGGGCAAGTACACAATCGTCTGGCGCCACTTCCTCCGTTCGAT TGTAGTCCAACGTACGACAGTGTCTTGCAATTGTGGTGCTGTCACCCCAG AACCATGCCCTTGTCTGCCGAATGTCTCAAACCAAACGAAGACAAGGGGA CAGAGTAAAAGGAGGAAACAGTCGGTCGCGTCTTGTTAGCTACATAGTGC ATCATCTAGTCACAACTCCTTGTATCGACAGCTATCATCATCTCCAGTGT TGGGGGCTGTGAGTAGGTATTTTCGTATACACCGCTACAATTGTGGTTGC AAACCAGGAAATGCGAGCAGAATCAAATCCGTCGTTGCGTCGGCTTTGAG CAGTGAATCTCGGCTCTTTGGAGTTGGTTTTATTGGTTCGAGAGTGAATG TAGAGGTAAGGAGCGGCGTGATCTACACACAGCAAGATGGTGGTCGATGG GCGGCCAGTGGGAGACCCGTGAGTCTTTGCAAGCACATTACGTCAGCAAG CCGTTGCAGGCGTACAAAGTACCAACAACGGCGGTACAGAGCTTTAAAAA TGGTGGGGCAGATCCCTTGTGTGATTGCTGGACGCTCTTTCGATCGTTGC ACACATCTTGCAAGTTTCGGCGGGTACGTTTGCACCCCATAGAGTCGAAC ACGCCGACTATTGGCGGTGGAATACGGGTCGAAGGTCGTTCGGTGATGAG ATGGATTTTTTCGGCGGCGAAGTGTCATGGCTGTCGGGGCGCAGACAATG ACTAGCGTTTGGCGATGAGTGAAGCTCCTCCGTTCACCCTTTCACCTGGG GCAGAGTGACGCCGACTACAAAATATTCAACACGCGTAGTGAAAAGCAGA GATGTTTGGTGCTGATTGCGTTGGACACAGTCACAAGAAACGAGTACTGC TATTCCAACAAATGTGTACAAAAAGTGTTTTTATGTGCCTCGAAACTAGT TCCTCAAGTGCAGCCCAAATAGTCCTTGGCTGGCGCGACTTTCACACCAC AAGCTGTCCACGCATTTGTGCAACCTTGATTTCACCCCATCAGGGAGGAG ATTTTCGCCATCATTACCACGGCTTGCGACCATCATGACGAAGCCCACGC CTCATCATGGAAGCACCCCTGGATATGCATCACGGAGATCAGACGGGATG ACGAACCCGCTCTGTGGGTGTGGGTGAATGAGATTCTCCTGGACTCCACG AGGCTCTTATTATCGACTGCTGCGTGATGCTGGCGGACAGAATAGACAGC GCAGCGTCCATCCAGCTAGGCACCGCCCTGGAACTGGACGACATCCAAGG ACGCGGTGCCGGTATCCGCTTCCCAAAGGTGAGCATCGTTTGGGGAGTCT GTGCACAACGTAGTTTACTCTCTGCAGCATCGTTCTGTTGTGATATTCAC CCCGTGTTCGTAAAGGTGCAACCATGTGTGTGCTGTGCTTGGGACATTCC TTCGCGCATGCACATGTCTCTGTTGGTAGCTCGTCTTTCATGCCCCAAGG CCGATATCGATGTGCTACATTGGTGTTCGCTCGGTTATGAGGGCAACGGG AAAGAGGCGCCCTGCTCGTGCCAGACACAAGCACCAGGTATACAGCACGA AGTCCGGCAACATTGGCTTCGCAACCGTCTTCAATGGTCCGCTGCTCACC TCTCGCGCCTGGATCCGCAGGCGGTTTCTGGGGTAGTGGCTCTGTGGGGG TCATTGCTCCCTGCGGCCGCCGAACGCGCCCGGCAAACGTACGCCCACAC CGCCGACTGCATATACCCGACGCCGGGCTATTCCGGCCGGACCCTATGTA GCTGCGGAATGGGCAAAGACTTACACCAGGGTTCGTCGAATCCATGCGCT CAGCGAACGCAATGGGACTCGTGCCGTTGCAGACATGCTTCCACAGGGCG GCGTTGTCGCCGCTTTTCCCGGCCCACGAGAAGCTCTCCACTCAATTTCC TGCATCCGGGACCGCCGCCGACGGATCGAGGAAGTGTGCTTAATGTGGCA AAAGCGGCAAGTCCCTTCAGTGTTCCCGCTGCCGCAAGGTATCCTACTGC TCGAAGGAATGCCAGCGCCGAGACTGGAAGAGCCACAAGCCTTCCTGCCG C
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1117:8503..13103-

>mRNA_Ecto-sp13_S_contig1117.1026.1 ID=mRNA_Ecto-sp13_S_contig1117.1026.1|Name=mRNA_Ecto-sp13_S_contig1117.1026.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=738bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1117:8503..13103- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGGCGATGCCGCAGTCGACCAGGCGGTGGAGCTCGTAGAACAGGC
CGGAAGTAACAGTGGGGACGCCCGGCTGGTGTACAGCGTAACACTGGTCA
TGGCTAACGACGAGGCACGCGAGTGCCTTGCGGCAGGAGGGGCACCAGCC
CTCGAGACGTTGCATGATCCTTGCTCTGTGCGGGTGGCGCTGGGGGAAGG
GCTTAGCCACGCGACCGGTCTGCCATTTCCGATCGAGCGAAGGCGTGTGC
AAATGGAGTACAGCAAGCGCCAGGGAAACGTGATTTACACCGTACCCCCC
GTCAGGCAGCCCCTCAACCTTCCGTTGGCATGGACGGGGCTCGACATCGA
AGGAGTAGAAAAGGCGGTTCTGCCGTCGATGCCTTCTTGGTCTCCCGCCG
TTCCTCTTTCATCACTGCCGAGGCTGGACTTCCAGGCTGAGTGGGCCCAC
CAAAAGGTCATGGGCGGCGTCTCGTTCACGCCGGCGGAAAGGTCCATGCG
GGAGGAGCTCCCCACGCCTACCTCAGAGATCGTCGATCCGGTGTTCGTTG
GGCTGAAGGAGATTTTCGCCATCATTACCACGGCTTGCGACCATCATGAC
GAAGCCCACGCCTCATCATGGAAGCACCCCTGGATATGCATCACGGAGAT
CAGACGGGATGACGAACCCGCTCTGTGGGTGTGGGTGAATGAGATTCTCC
TGGACTCCACGAGGCTCTTATTATCGACTGCTGCGTGA
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