mRNA_Ecto-sp13_S_contig11164.1022.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: D8LFF1_ECTSI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFF1_ECTSI) HSP 1 Score: 324 bits (831), Expect = 8.190e-110 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 1
Query: 1 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 480
MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRT+FLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY
Sbjct: 5 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTIFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 164
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: A0A835YJC3_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC3_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.890e-48 Identity = 85/160 (53.12%), Postives = 109/160 (68.12%), Query Frame = 1
Query: 1 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 480
MN++FR A +F +THKQEVCRLYRASL+LLDSWA+DRTVFL+EA K+R FD + S RA+ L+ A + +VH DRYI YMP GS FMRNP PLE CYP GIP++V E G+ E+ +DM+ + G +KAG + VDLATK++Y
Sbjct: 1 MNASFRAVAERFRMAPESLTHKQEVCRLYRASLRLLDSWAVDRTVFLDEAEKIRDQFDANAALDARSGRARYLIANARASLRTYVHPDRYIPAYMPGGSLFMRNPALPLEVCYPNGIPEDVAKEMGGI--ELNIDMTYAKPGVKAKAGTLYVDLATKQMY 158
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: A0A7S2KZH1_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KZH1_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.450e-34 Identity = 68/157 (43.31%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 1 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATK 471
MN+ F A +Q+ + +TH Q+V +LYR SLK+L SWA+DRTVF+EEA+K+RA FD C PD +A +R + + E+ H D Y P+MP GS FMRNPP P++ C+P G ++ A+ V + ++ + + E G+ S GQVLVD +K
Sbjct: 1 MNTAFIAAGSQYKQQLPQLTHNQQVAKLYRHSLKVLGSWAVDRTVFIEEASKLRARFDANRNCAPD--KANRFLREGKEELQEYTHPDPYRIPFMPGGSMFMRNPPLPMDVCFPDG---DIPADAPKVTLNPDMSICKEETGK-SAVGQVLVDFTSK 151
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: A0A3F2RHY1_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RHY1_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.580e-34 Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 1
Query: 1 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDEVLAEFKGVPME-VEVDMS 411
MN TFR +F+ K +THKQ V RLY+ SLK LDSW IDR ++ EEATK+RA F+ SK P+S AK L+R A + +D + H DRYI YMP G+ +MRN P PL+ C+P G IPD+V P+E + +DM+
Sbjct: 10 MNKTFREVVGRFVGKPQQLTHKQTVQRLYKKSLKTLDSWIIDRRLWNEEATKIRAEFNTNSKLDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGTLYMRNAPIPLDVCFPDGVIPDDVEVS----PLEAINIDMT 144
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: D0NC32_PHYIT (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0NC32_PHYIT) HSP 1 Score: 131 bits (329), Expect = 5.110e-34 Identity = 66/134 (49.25%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDEV-LAEFKGVPMEV 396
MN TFR +F+ ++HKQ+V R+Y+ SLK LDSW IDR ++ EEATK+RA FD SK P+S AK L+R A + +D + H DRYI YMP GS FMRN P PL+ C+P G IP++V L+ +G+ +++
Sbjct: 10 MNKTFREVVGRFVGAPPQLSHKQKVQRVYKKSLKTLDSWVIDRRLWNEEATKIRAEFDANSKLDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLFMRNAPIPLDVCFPDGNIPEDVELSPLEGINIDM 143
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: A0A662X962_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X962_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.560e-32 Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 1 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDEVLAEFKGVPME-VEVDMS 411
MN TFR ++++ +TH+Q V RLY+ SLK LD W IDR ++ EEATK+RA FD SK P+S +K L+R A + +D + H DRY+ YMP GS FMRN P PL+ C+P G IPD+V P+E + +DM+
Sbjct: 10 MNKTFREVVSRYVGAPQQLTHQQTVQRLYKQSLKTLDCWIIDRRLWNEEATKIRAEFDANSKLDPESGLSKRLVREAQEKLDHYTHPDRYVFNYMPGGSLFMRNAPIPLDVCFPDGVIPDDVEVS----PVEAINIDMT 144
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: A0A484DVB9_BRELC (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVB9_BRELC) HSP 1 Score: 128 bits (321), Expect = 2.180e-32 Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 1 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDEV-LAEFKGVPMEV 396
MN TFR +F+ ++HKQ V RLY+ SLK LDSW IDR ++ EEATK+RA FD + DS +AK L+R A + ++ + H DRYI YMP GS FMRN P PL+ C+P G IPD+V L+ +G+ +++
Sbjct: 46 MNKTFRDVVGRFVGVPPQLSHKQSVQRLYKKSLKTLDSWIIDRRLWNEEATKIRAEFDANANLDADSGQAKRLIREAQEKVEHYTHPDRYIFNYMPGGSLFMRNAPIPLDVCFPDGVIPDDVELSPLEGINIDM 179
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: A0A4D9CY03_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY03_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.440e-32 Identity = 69/159 (43.40%), Postives = 99/159 (62.26%), Query Frame = 1
Query: 4 NSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 480
N++ R AAAQ+I+ ++HK V RLYR SLK L+SWAIDR VFL EA K+RASF + P+S + KAL+R A++ + + H D+YI P+MP G+ FMRNPP P + + +P++V E + +DM+ +G G+VLVD A K +
Sbjct: 3 NASMRAAAAQYINPAPQLSHKTIVVRLYRKSLKTLNSWAIDREVFLSEAGKLRASFSANAHLAPESGKVKALVRKAHEELLRYSHPDKYILPWMPGGTLFMRNPPLPFDVVFAGHVPEDVKEE------PLNIDMTPVVKGEKGD-GRVLVDSANKAYF 154
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: M4BUQ9_HYAAE (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUQ9_HYAAE) HSP 1 Score: 126 bits (317), Expect = 3.560e-32 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 1 MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDEV-LAEFKGVPMEV 396
MN+T R +F+ ++HKQ V RLY+ SLK LDSW IDR ++ EEATK+RA FD + P+S AK L+R A + +D + H DRYI YMP GS +MRN P PL+ C+P G IPD+V L+ +G+ +++
Sbjct: 1 MNATLREVVGRFVGAAPNLSHKQTVQRLYKKSLKTLDSWVIDRRLWNEEATKIRAQFDSNEQLDPNSGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLYMRNAPIPLDVCFPDGEIPDDVELSPLEGINIDM 134
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Match: A0A7S2DAM5_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAM5_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.090e-32 Identity = 70/160 (43.75%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 4 NSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRM-SKAGQVLVDLATKRVY 480
N+ F AA Q+ K +TH Q VCRLYRASLK L SWA+DR VFL EA K++A F DS L++ + + + H D+YI Y+P GS +MRNPP PL CYP GIP+ V E + + +DMS G + GQV+VD ++K Y
Sbjct: 3 NAAFVLAAKQYRQKAPDLTHAQVVCRLYRASLKTLGSWAVDRQVFLTEALKIQAEFRANENLSADSPTTTRLVKEGQEKLFSYTHPDKYIPAYLPGGSLYMRNPPLPLSVCYPDGIPEGV--EEGLINKLLNIDMSPVRSGESGATVGQVIVDASSKSTY 160 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11164.1022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11164.1022.1 >prot_Ecto-sp13_S_contig11164.1022.1 ID=prot_Ecto-sp13_S_contig11164.1022.1|Name=mRNA_Ecto-sp13_S_contig11164.1022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp MNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTVFLEEAback to top mRNA from alignment at Ecto-sp13_S_contig11164:348..5131+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11164.1022.1 ID=mRNA_Ecto-sp13_S_contig11164.1022.1|Name=mRNA_Ecto-sp13_S_contig11164.1022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4784bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11164:348..5131+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11164:348..5131+ >mRNA_Ecto-sp13_S_contig11164.1022.1 ID=mRNA_Ecto-sp13_S_contig11164.1022.1|Name=mRNA_Ecto-sp13_S_contig11164.1022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11164:348..5131+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |