mRNA_Ecto-sp13_S_contig11153.1008.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: D7FQ84_ECTSI (Glycerophosphocholine acyltransferase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ84_ECTSI) HSP 1 Score: 476 bits (1224), Expect = 5.780e-164 Identity = 269/302 (89.07%), Postives = 274/302 (90.73%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWYPLDPMRGGTAGAEPECQDSIDMRDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRYWQSMEAESAAKAEALVVKATRQRERERLRNGEDGIAAGGQMLSASSGGSGEDLADDDYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAAEVEVVGGMDGLLGGEVGAAAGENSGQEKSKDV 909
+MTSCFIHLFP WLALTLRWYPLDPMRGGTAGAEPECQD DM DVGTAM MYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSN MHKIVLALMRK GMFK+DETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKW S+SLAFFVFLCALWNSSNYYI+VFSRRYWQSMEAESAAKAEALVVKATRQRERERLR+GEDGIAAGGQMLSASSGGSGEDLADDDYEXXXXXXXXXXXXXXXXXXXXXX E VG MDGL GGEVGAAA EN GQEKSKDV
Sbjct: 253 KMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQDGFDMGDVGTAMGMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKIVLALMRKTGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQSMEAESAAKAEALVVKATRQRERERLRSGEDGIAAGGQMLSASSGGSGEDLADDDYEXXXXXXXXXXXXXXXXXXXXXX--------------AEAVGDMDGLFGGEVGAAADENPGQEKSKDV 540
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: A0A836CMU1_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU1_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.770e-52 Identity = 83/181 (45.86%), Postives = 118/181 (65.19%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWYPLDPMRGGTAGAEPECQDSIDMRDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRYWQSME 546
+ +S ++H FP L L+ RW+ G P+C D++ + D G AMA+Y AWQ++YF KTE+ D+P L ADP +QTSLRWLTT N +HK+VL R++ + +DETF+P+T KTK+IFM +Q+ FTV+ P P LY S + +F CA+WN N+YI+VF+RRYW +E
Sbjct: 200 KTSSVYVHFFPALLTLSTRWHATWQHGAAPPGGAPQCDDTVTLLDFGLAMAVYTAWQIVYFIKTEVVDRPILLADPALQTSLRWLTTDSKNALHKLVLLAARRMRIMARDETFEPSTLKTKIIFMSTQMAFTVVTMAPVPALYASYPAHAAFVLAMFGCAVWNGGNFYIEVFARRYWADLE 380
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: W7TS45_9STRA (Glycerophosphocholine acyltransferase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS45_9STRA) HSP 1 Score: 160 bits (404), Expect = 5.790e-42 Identity = 79/176 (44.89%), Postives = 114/176 (64.77%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWYPLDPMRGGTAGAEPECQDSIDMRDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRY 531
++TS +IH++PG L LRWYP P +A A + S+D++D+ A +YLAWQ++Y+ K EI D+ +L+ADPE+QTSLRWL N +H++VL L R G+ DE FD T KTK IF+ +Q ++T+L LP +Y+S V+ +F A++N +NYYIDVFS RY
Sbjct: 255 KITSLYIHVYPGLLLYALRWYPSSP----SAAATLDACGSMDVKDLLPAAVVYLAWQIMYYVKIEILDRARLEADPELQTSLRWLAKDHKNALHRLVLRLTRATGVLAPDERFDHRTLKTKSIFILTQFIYTLLTCLPALVIYHSFQLHVAYGLGMFTVAVFNGANYYIDVFSVRY 426
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: A0A0L0DIY4_THETB (Glycerophosphocholine acyltransferase 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIY4_THETB) HSP 1 Score: 156 bits (395), Expect = 1.160e-40 Identity = 84/188 (44.68%), Postives = 113/188 (60.11%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWYPLDP------MRGGTAGAEPECQDS---IDMRDVG---TAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRY 531
++TS FIH FP L TL WYP P T AE S + VG MA+YL WQVLY++KTE+ D+ K +AD + TSLRWL+ N MHK+VL+L+R+IG+ E FD +T KTK+IFM +Q V+TV+ LP P +Y+S ++L + +LWN +N+Y DVFSRRY
Sbjct: 237 KVTSVFIHAFPAMLTFTLHWYPAVPEGVSLATAATTQWAEYNTMASHFHAPISFVGWFVMPMAIYLVWQVLYYYKTEVRDRSKFEADKTLTTSLRWLSADDKNPMHKLVLSLLRRIGVMGPTEKFDASTVKTKVIFMATQFVYTVITILPIPIIYSSVHLHIALLVALLGVSLWNGANFYFDVFSRRY 424
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: A0A6G0WYG3_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYG3_9STRA) HSP 1 Score: 139 bits (350), Expect = 6.950e-35 Identity = 73/189 (38.62%), Postives = 109/189 (57.67%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWY----PLDPMRGGTAGAEPECQDSIDMRDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRYWQSMEAESA 558
+M+ FIHL P L +++W+ PL G + DS+++ D G A YL WQ LYF KTE+ D+ KLDA P++ TSLRWLTT N VLA+ R+IG+ + E +DP T KTK+IF+ Q V+T LPT ++ S + F+F A+ N ++YY +VF++ Y + + ++A
Sbjct: 175 RMSGVFIHLMPCLLYYSIQWFGCASPLSIFSGSSGQPASGPVDSLELADFGYATIGYLIWQTLYFAKTEVVDREKLDARPDLLTSLRWLTTDKKNGFSLFVLAICRQIGVMGRTEEYDPKTTKTKIIFVTGQFVYTFCTFLPTILIFRSHFLHCLYIQFIFAAAVHNGASYYFEVFAKIYQKKLVPDAA 363
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: L1JKC0_GUITC (Glycerophosphocholine acyltransferase 1 (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JKC0_GUITC) HSP 1 Score: 132 bits (333), Expect = 4.820e-33 Identity = 68/176 (38.64%), Postives = 101/176 (57.39%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWYPLDPMRGGTAGAEPECQDSIDMRDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRY 531
++TS +IHLFP RW+ G A +P D M + + Y+ WQ+ Y +TE+ D+ KLD DP I+TSLRWL + +KI L L R + + E+FD FKTK++F+ QL++T+L LPT +Y S + +L F+F ++WN +NYYIDVFS+ +
Sbjct: 134 KVTSVYIHLFPSLFTWCERWH------GDEAAKQPMTLDGWLM----SPLKFYMLWQIFYLVQTEVIDRKKLDDDPTIKTSLRWLAQDKRSAPNKIALKLCRSMRIMDDKESFDHHNFKTKVVFVAMQLLYTILCFLPTGLVYQSFFLHSALIIFIFAASVWNGANYYIDVFSKSF 299
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: A0A485LCA6_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCA6_9STRA) HSP 1 Score: 134 bits (338), Expect = 6.250e-33 Identity = 73/178 (41.01%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWYPLDPMRG--GTAGAEPECQDSIDMRDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRY 531
+M+ FIHL P L +RWY P+ +P DS+D+ D A +YL WQ YF KTE+ D+ KLDA PE+ TSLRWLTT N VL+L R + + E ++ T KTK+IF+ +QLV+T+ PTPFL+ S + + F+F A+ N ++YYI+VF++ Y
Sbjct: 204 RMSGVFIHLMPCLLYYAIRWYGCAPLFALPRFPSTDPP-HDSLDVVDFTFATILYLFWQACYFVKTEMFDREKLDARPELLTSLRWLTTDKKNGFSLFVLSLCRAMRVMGPTEEYNSRTTKTKLIFLAAQLVYTLGTFAPTPFLFRSHFVHCAYIQFIFAAAVHNGASYYIEVFAKMY 380
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: A0A7S2B0L6_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0L6_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.340e-32 Identity = 89/243 (36.63%), Postives = 124/243 (51.03%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWYPLDPMRGGTAGAEPECQDSIDMRDVG--TAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRYWQSMEAESAA----KAEALVVKATRQRER--ERLRNGED-GIAAGGQMLSASSGGSGEDLADDDY 705
++T+ +IH+ P WL RW + GT E G TA YL WQVL++ KTE+ D L++D + QTSLRW+ S +H++VL LMRK + E FDP T KTK+IFM SQ VFT + LPT ++ +++ VF ++N YYI+VFSRRY+ E + A A+ + K T + E E+ R+ D G MLS GED DD+
Sbjct: 238 KVTTLYIHILPSWLVYANRW-----LIAGTGSRFEELAQCEAFGTAGLFTAFLGYLFWQVLFYVKTEVVDAAFLNSDKDHQTSLRWMALDDSKAVHRLVLWLMRKYQLMGPKERFDPRTHKTKIIFMASQFVFTAITILPTFLVHKYFLVNLAYVIAVFTAGVYNGGEYYIEVFSRRYYTQFEKTATAVRDFNADNPIDKTTAEEEATSEKERSASDVGFREPPPMLSDDE--DGEDSGLDDF 473
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: Q01D57_OSTTA (Glycerophosphocholine acyltransferase 1 n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q01D57_OSTTA) HSP 1 Score: 129 bits (323), Expect = 1.000e-30 Identity = 71/181 (39.23%), Postives = 101/181 (55.80%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWYPL--DPMRGGTAGAEPEC---QDSIDMRDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRY 531
++ S F+H P + RWY D R A + + Q S+D+ + M YL WQ LY KTE DK KLD DP + TSLRWL + + +K L MR IG+F DE FDP T+KTK +F+ QL +T++ +P PF Y + + +L + F +++N + YYID+FS RY
Sbjct: 186 KVQSVFVHAMPCLMTWCGRWYGFGDDENRLSVADLDSDVTVLQGSLDL--MVYPMLAYLLWQTLYLVKTEYVDKAKLDTDPALMTSLRWLASDRKSAANKFALKTMRGIGLFGTDEFFDPKTWKTKFVFVMFQLCYTIVTFIPIPFCYLNYYAHTALMWVCFGTSVYNGAVYYIDIFSTRY 364
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Match: A0A7S3MDK0_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDK0_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.330e-30 Identity = 68/181 (37.57%), Postives = 105/181 (58.01%), Query Frame = 1
Query: 4 QMTSCFIHLFPGWLALTLRWY--PLDPMRGGTAG---AEPECQDSIDMRDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNLMHKIVLALMRKIGMFKKDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWTSVSLAFFVFLCALWNSSNYYIDVFSRRY 531
++ S +IH+ P L TLR LD R G C D + + D A+ +Y+ WQ +Y +KTE DK +LD+DP + TSLRWL N + L + R IG+F K+E +D T KTK++F+ +QL+FT++ LPTP +Y+ ++ F+ A++N ++YI+VFS+RY
Sbjct: 177 KIVSVYIHILPSMLYYTLRHNNSSLDIFRQAIPGDVCGSANC-DRLYLTDYLLAVLLYMFWQFIYLYKTEFLDKSRLDSDPSLMTSLRWLAQDTKNAAARFFLKMFRLIGVFSKEEDYDSRTMKTKIVFVVAQLIFTLVSFLPTPLMYHYSGFHLTWILFIVTSAVFNGGSFYIEVFSKRY 356 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11153.1008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11153.1008.1 >prot_Ecto-sp13_S_contig11153.1008.1 ID=prot_Ecto-sp13_S_contig11153.1008.1|Name=mRNA_Ecto-sp13_S_contig11153.1008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp MQMTSCFIHLFPGWLALTLRWYPLDPMRGGTAGAEPECQDSIDMRDVGTAback to top mRNA from alignment at Ecto-sp13_S_contig11153:3759..5534- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11153.1008.1 ID=mRNA_Ecto-sp13_S_contig11153.1008.1|Name=mRNA_Ecto-sp13_S_contig11153.1008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1776bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11153:3759..5534- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11153:3759..5534- >mRNA_Ecto-sp13_S_contig11153.1008.1 ID=mRNA_Ecto-sp13_S_contig11153.1008.1|Name=mRNA_Ecto-sp13_S_contig11153.1008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11153:3759..5534- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |