mRNA_Ecto-sp13_S_contig11148.1002.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: D7G3P6_ECTSI (Origin recognition complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P6_ECTSI) HSP 1 Score: 248 bits (632), Expect = 1.310e-77 Identity = 119/123 (96.75%), Postives = 119/123 (96.75%), Query Frame = 1
Query: 1 QDPVRDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETPQEYSSGSLLHHAQGFIKAFELQRLPCYSSNRT 369
QDPVRDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELL KFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETP EYSSGSLL HAQGFIKAFELQRLP YSSNRT
Sbjct: 192 QDPVRDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLTKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETPPEYSSGSLLLHAQGFIKAFELQRLPSYSSNRT 314
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: A0A6H5LEG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEG7_9PHAE) HSP 1 Score: 247 bits (631), Expect = 5.130e-74 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 1
Query: 1 QDPVRDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETPQEYSSGSLLHHAQGFIKAFELQRLPCYSSNRTG 372
QDPVRDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELL KFEDYVDEHNV+NGG+VVGYDGFHANASVRDLLNSLCKELLGAETP EYSSGSLL HAQGFIKAFELQRLP YSSNRTG
Sbjct: 883 QDPVRDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLTKFEDYVDEHNVSNGGSVVGYDGFHANASVRDLLNSLCKELLGAETPPEYSSGSLLLHAQGFIKAFELQRLPSYSSNRTG 1006
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: S2JJN8_MUCC1 (Origin recognition complex subunit 2 n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) TaxID=1220926 RepID=S2JJN8_MUCC1) HSP 1 Score: 62.0 bits (149), Expect = 1.080e-8 Identity = 36/100 (36.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query: 13 RDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETPQEYSSGSLLHHAQ 312
+D +D S ++ FP+W EL G++L+FYG GSKR LLN+F +T+G +V +GF + S++D+L + LG S+GS+ H Q
Sbjct: 273 QDEIDILSEMHKQHFPQWFFELHSGFNLVFYGYGSKRNLLNEFAQTA----LTDGPLIV-VNGFFPSISIKDILLKITAGALGTTV----STGSIQDHVQ 363
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: C5FHS5_ARTOC (Origin recognition complex subunit 2 n=1 Tax=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) TaxID=554155 RepID=C5FHS5_ARTOC) HSP 1 Score: 60.8 bits (146), Expect = 2.730e-8 Identity = 27/89 (30.34%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 1 QDPVRDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAE 267
+DP+++ D E+ FP+W E+ G+++ YG GSKR+L+ ++ D++ EHN +V +G+ N ++R +L ++ +LG +
Sbjct: 260 KDPLQEEKDYLLELHERSFPQWNFEMTEGFNVCIYGYGSKRKLVQRYADWLYEHN-DQPPLIVIVNGYTPNITIRSVLATVATAILGPD 347
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: I1CDD5_RHIO9 (Origin recognition complex subunit 2 n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CDD5_RHIO9) HSP 1 Score: 60.5 bits (145), Expect = 3.540e-8 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 46 EKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETP 273
++ FP+W EL G++L+FYG GSKR LLN+F V +TNG +V +GF + S++D+L + LG + P
Sbjct: 269 KQHFPQWYFELQSGFNLVFYGYGSKRNLLNEFAQTV----LTNGPLIV-INGFFPSISIKDILVKITAGALGTQAP 339
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: A0A8H7RAP9_9FUNG (Origin recognition complex subunit 2 n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7RAP9_9FUNG) HSP 1 Score: 60.5 bits (145), Expect = 3.730e-8 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 13 RDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETPQEYSSGSLLHHAQGFIKAF 330
+D + S ++ FP+W EL G++L+FYG GSKR LLN+F +T+G +V +GF + S++D+L + LG P +GS+ H Q F
Sbjct: 274 KDEIAILSEMHKQHFPQWFFELQSGFNLVFYGYGSKRNLLNEFAQTA----LTDGPMIV-VNGFFPSISIKDILLKITAGALGTTGP----TGSIQDHVQFICNYF 370
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: A0A0B7N551_9FUNG (Origin recognition complex subunit 2 n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N551_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 6.930e-8 Identity = 36/100 (36.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query: 13 RDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETPQEYSSGSLLHHAQ 312
R+ + S + FP+W EL G++L+FYG GSKR LLN+F +T+G +V +GF S++D+L + LG+ P SGS+ H Q
Sbjct: 272 RNEIALLSEMHTQHFPQWFFELQSGFNLLFYGYGSKRNLLNEFAKTA----LTDGPMIV-VNGFFPTISIKDILLKITAGALGSAGP----SGSIQDHVQ 362
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: A0A1B7N7Y7_9AGAM (Origin recognition complex subunit 2 n=2 Tax=Rhizopogon TaxID=5375 RepID=A0A1B7N7Y7_9AGAM) HSP 1 Score: 59.3 bits (142), Expect = 8.920e-8 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 55 FPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCK 249
F RW ELD G++L+FYG+GSKR +LN F +V + G V + FH + +VRD+L S+ +
Sbjct: 90 FKRWARELDEGFNLLFYGLGSKRSILNDFAKHVSKR-----GHVTVVNAFHPSVTVRDMLVSIAR 149
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: UPI001B866944 (origin recognition complex subunit 2 n=1 Tax=Suillus paluster TaxID=48578 RepID=UPI001B866944) HSP 1 Score: 59.3 bits (142), Expect = 8.920e-8 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 55 FPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCK 249
F RW ELD G++L+FYG+GSKR +LN F +V G V + FH + +VRD+L S+ +
Sbjct: 91 FKRWARELDEGFNLLFYGLGSKRSILNDFAKHVSRR-----GHVAVVNAFHPSVTVRDMLASIAR 150
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Match: UPI0006C96219 (origin recognition complex subunit 2 n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C96219) HSP 1 Score: 58.9 bits (141), Expect = 1.260e-7 Identity = 33/121 (27.27%), Postives = 64/121 (52.89%), Query Frame = 1
Query: 13 RDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYVDEHNVTNGGAVVGYDGFHANASVRDLLNSLCKELLGAETPQEYSSGSLLHHAQGFIKAFELQRLPCYSSNRTGG 375
+DI++A A+K +P W ++ G++++ YG+GSKR L+N+F + T + +GF N +++++L+++ ELLG +T + + G + +K R+ N GG
Sbjct: 200 QDIINALYDCAQKYYPEWFRLMEEGFTVLLYGLGSKRLLINQFHKEMISDEPT-----LIINGFFPNLTIKEILDNIIVELLGKQT--DTNQGECFEIIEKTMKRHSSDRIYLLIHNLDGG 313 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11148.1002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11148.1002.1 >prot_Ecto-sp13_S_contig11148.1002.1 ID=prot_Ecto-sp13_S_contig11148.1002.1|Name=mRNA_Ecto-sp13_S_contig11148.1002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp QDPVRDIVDAASSKAEKKFPRWKSELDWGWSLMFYGVGSKRELLNKFEDYback to top mRNA from alignment at Ecto-sp13_S_contig11148:1266..2591- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11148.1002.1 ID=mRNA_Ecto-sp13_S_contig11148.1002.1|Name=mRNA_Ecto-sp13_S_contig11148.1002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1326bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11148:1266..2591- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11148:1266..2591- >mRNA_Ecto-sp13_S_contig11148.1002.1 ID=mRNA_Ecto-sp13_S_contig11148.1002.1|Name=mRNA_Ecto-sp13_S_contig11148.1002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=375bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11148:1266..2591- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |