mRNA_Ecto-sp13_S_contig11130.991.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11130.991.1
Unique NamemRNA_Ecto-sp13_S_contig11130.991.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A6H5L2V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V2_9PHAE)

HSP 1 Score: 605 bits (1559), Expect = 1.750e-214
Identity = 300/302 (99.34%), Postives = 301/302 (99.67%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 906
            LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFES FLSDVRDLPMQRRDPLPKASVAQITPAV+EAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV
Sbjct:  205 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESMFLSDVRDLPMQRRDPLPKASVAQITPAVNEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 506
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: D8LUB6_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB6_ECTSI)

HSP 1 Score: 606 bits (1562), Expect = 2.800e-214
Identity = 301/302 (99.67%), Postives = 301/302 (99.67%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 906
            LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFES FLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV
Sbjct:  305 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESMFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 606
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A835ZDJ4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ4_9STRA)

HSP 1 Score: 369 bits (946), Expect = 1.070e-122
Identity = 188/302 (62.25%), Postives = 227/302 (75.17%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 906
            LLEMGFRPAIEA LR +P    RQTLLFSATMP DVR I+++A++  +E VD VGEEESTH+HVPQ   V   +  V +L  LLR  +      HKIIVFFTTARLTQF+AELCN MG PVLEIHSRKSQ  R KVS+ FRNG GL+MFTSDV+ARGMDYPDV++VIQVG+PSDKAQYIHRLGRTARAGK G GVLLLCDFE+ FL +V DLP+ R +P   A +  + P V+EA  ++   + + AYQA LGF N +L+R+GW+K  LV+ AN W  T+    E P ++AKT+GKMGL+GV
Sbjct:  165 LLEMGFRPAIEAALRNLPPPSARQTLLFSATMPQDVRAISRIAMRPDFELVDTVGEEESTHEHVPQSAVVTTMEHGVPQLLLLLRRAVHDADGAHKIIVFFTTARLTQFHAELCNAMGMPVLEIHSRKSQSQRTKVSDQFRNGSGLIMFTSDVTARGMDYPDVTSVIQVGIPSDKAQYIHRLGRTARAGKGGRGVLLLCDFEAAFLREVSDLPVVREEPAGDAQLQALLPRVNEAILRLPDTTKITAYQANLGFLNSNLKRLGWNKDQLVSVANDWACTVMNLSEPPALEAKTVGKMGLKGV 466
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A7S4D8Q7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8Q7_HETAK)

HSP 1 Score: 369 bits (946), Expect = 1.160e-121
Identity = 184/304 (60.53%), Postives = 226/304 (74.34%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAG--KAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 906
            LL+MGFRP+I  IL+++P    RQTLLFSATMP DV+++A+  L   YE VDCVG+E  THQ VPQ + VC  + Q+ EL Q++ E       GHK+IVFFTTARLTQFYAE+ N MG PVLEIHSRKSQGHR KVS+ FR G GLVMFTSDVSARGMDYPDV+ VIQVG+P+D+AQY+HRLGRTARAG  + G GVLLL +FE  +L  + DLP+Q R P P  ++A   P +S A  +++  +   AYQAW+GFYN +LRR  WSK DLV  AN+WIT +C   EVP +QAKT+GKMGL+ V
Sbjct:  185 LLDMGFRPSIVKILQHLPPKSGRQTLLFSATMPQDVQEMARFGLNPSYELVDCVGKEAGTHQQVPQTFLVCSVEDQLGELAQIIAEGRQVP--GHKLIVFFTTARLTQFYAEVFNFMGVPVLEIHSRKSQGHRTKVSDQFRTGNGLVMFTSDVSARGMDYPDVTGVIQVGMPADRAQYVHRLGRTARAGGREGGRGVLLLAEFERPYLRQLSDLPLQPRAPSPPEALAAQGPQLSAALARLSHATRGAAYQAWMGFYNSNLRRCNWSKEDLVRNANHWITAVCEAPEVPALQAKTIGKMGLKNV 486
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A7S0QEX6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QEX6_9CRYP)

HSP 1 Score: 367 bits (943), Expect = 5.010e-120
Identity = 190/302 (62.91%), Postives = 233/302 (77.15%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYE-FVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRG 903
            LL+MGFRPAI  +LR +P    RQT+LFSATMP DV+ IA LAL+++ + F+D VG+E++THQHV Q   VC ++  + EL  L+R+ M      +K+IVFFTTAR TQ YAEL NLMG PVLEIHSR+SQ  RNKVSE FR G  LVMFTSDVSARGMDYPDV++VIQVGLPSD+AQYIHRLGRTARAGK G GVLLLC+FES FL DV+DLP+Q R   P A++A + PAV+ A   ++  S+  AYQAWLGFYN  LRR+GW+KA+LVA+AN WIT +  + EVP +  KT+GKMGL+G
Sbjct:  331 LLDMGFRPAILQVLRCLPPKETRQTMLFSATMPQDVKTIASLALRDKKQAFIDTVGKEDNTHQHVEQLAVVCTKEALLPELVMLIRDRMQTP--DYKVIVFFTTARQTQLYAELFNLMGTPVLEIHSRRSQPQRNKVSEEFRTGARLVMFTSDVSARGMDYPDVTSVIQVGLPSDRAQYIHRLGRTARAGKDGAGVLLLCEFESFFLQDVKDLPLQTRPSQPLAALAPVMPAVARALASVSDGSLCTAYQAWLGFYNSSLRRMGWTKAELVAEANDWITAVMNRAEVPPLDPKTVGKMGLKG 630
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A7S3XX82_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX82_HETAK)

HSP 1 Score: 365 bits (937), Expect = 7.250e-119
Identity = 184/304 (60.53%), Postives = 226/304 (74.34%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAG--KAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 906
            LL+MGFRP+I  ILR +P    RQ+LLFSAT+P DV++IA L LK  YE VDCVGEEESTH+HVPQ   VC  + Q+ EL Q++ E       GHKIIVFFTTARLTQFYAE+ N MG PVLE+HSRKSQ  R K+SE FR  QG+VMF+SDVSARGMDYPDV+ V+QVG+P+D+AQY+HRLGRTARAG  + G GVLLL +FE  +L  + DLP+Q R P P  ++A   P +S A  +++  +   AYQAW+GFYN +LRR  WSK DLV  AN+WIT +C   EVP +QAKT+GKMGL+ V
Sbjct:  302 LLDMGFRPSILRILRGLPPKAGRQSLLFSATLPRDVQEIAGLGLKPSYELVDCVGEEESTHRHVPQSVLVCSMETQLAELAQIVEEGRQVP--GHKIIVFFTTARLTQFYAEIFNFMGVPVLEMHSRKSQSARTKISEQFRTQQGVVMFSSDVSARGMDYPDVTQVVQVGMPADRAQYVHRLGRTARAGGREGGRGVLLLAEFERPYLRQLSDLPLQPRAPSPPEALAAQGPQLSAALARLSHATRGAAYQAWMGFYNSNLRRCNWSKEDLVRNANHWITAVCEAPEVPALQAKTIGKMGLKNV 603
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A7S2UXM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM4_9STRA)

HSP 1 Score: 354 bits (908), Expect = 2.990e-117
Identity = 176/304 (57.89%), Postives = 224/304 (73.68%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVS--EAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 906
            LL+MGFRPAIE I+ ++P  + RQ LLFSAT+P DV+ IA++AL  RY  VDCVGEE+STH+HVPQ Y VC    Q++EL  L+RE M     G+K++ FFTTAR+TQF+AEL   +G PVLEIHSRKSQ +R + S+ FR G  LVMFTSDVSARGMDYP+V++V+QVGLP+D+AQYIHRLGRTARAG+ G+GVLLLCDFE +FL  ++DLP++ R            P V    A  ++   ++ CAYQAWLGFYN HLR+IGW++  LV  AN W   +C    VP ++AKT+GKMGL+GV
Sbjct:   82 LLDMGFRPAIERIIGWLPPKQGRQNLLFSATLPQDVQTIARVALNPRYAMVDCVGEEQSTHEHVPQSYLVCSMSDQLKELYALVREAMQQP--GYKVLAFFTTARMTQFFAELFVKLGIPVLEIHSRKSQKYRTRTSDSFRKGSNLVMFTSDVSARGMDYPNVTSVVQVGLPTDRAQYIHRLGRTARAGQGGNGVLLLCDFERSFLRQMQDLPLKPRKSGSFGGXXXXXPQVEIERALGQLPEKTLACAYQAWLGFYNSHLRKIGWTQKQLVQAANTWALDVCLCPTVPALEAKTIGKMGLKGV 383
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A7S0YY46_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0YY46_9CRYP)

HSP 1 Score: 354 bits (909), Expect = 1.020e-116
Identity = 181/304 (59.54%), Postives = 223/304 (73.36%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALK--ERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 906
            LL+MGFRPAI  +L+++P    RQTLLFSATMP DV+ IA LA++  + + +VD VG EE+THQHV Q Y V  +     EL  L+RE M     G+KII FF TAR TQ Y+EL   +G PVLEIHSRKSQ  RNKVSE FR G  L+MFTSDVSARGMDYPDVS VIQ G PSD+AQY+HRLGRTARAGK G GVLLLCDFES FL D++DLP++ R  +P    A++ PAVS+A+ ++   ++  +YQAW+GFYN  LRR+GWSK DLVAQAN W+     + E P ++ KT+GKMGL+GV
Sbjct:  201 LLDMGFRPAILTMLKFLPPKDTRQTLLFSATMPKDVKTIADLAMRSAQNFAYVDTVGAEENTHQHVEQTYVVASKQGLAPELVTLVREGMMTP--GYKIIAFFPTARQTQLYSELLAALGIPVLEIHSRKSQSQRNKVSEQFRMGNSLIMFTSDVSARGMDYPDVSRVIQCGAPSDRAQYVHRLGRTARAGKDGSGVLLLCDFESYFLRDLKDLPVKARANIPPEEEARLLPAVSQAFQRLPDGTICASYQAWMGFYNSFLRRLGWSKEDLVAQANDWVMGTLMRHEPPEMEKKTIGKMGLKGV 502
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BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A7S1J8E5_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J8E5_9EUGL)

HSP 1 Score: 341 bits (875), Expect = 1.730e-111
Identity = 178/303 (58.75%), Postives = 218/303 (71.95%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFES-TFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV 906
            LLEMGFRPAIE +LR +P    R+TLLFSATMP DV+ IA+ AL++ Y+FVDCVG E+STHQHVPQ   VC   +Q+  L   +++ MAADP+  KIIVFFTTARLTQFYAE+ N  G P LEIHSRKSQ HR KVS+ FR G  L MFTSDVSARGMDYPDVSAVIQVG+PSD+AQY+HR+GRTARAGK+G GVL+L DFE+  FL  V DL +     L  A +AQ+ P  S+    +   +    YQA+LGFYN +L+R+ W+ A+ VA AN+W        E P I  +T+GKMGL+ V
Sbjct:  167 LLEMGFRPAIETMLRMLPPKSTRRTLLFSATMPADVKAIAKFALRDSYDFVDCVGAEQSTHQHVPQTSVVCTLQEQLVNLIAQVQKAMAADPQDFKIIVFFTTARLTQFYAEVFNHAGIPTLEIHSRKSQSHRTKVSDKFREGSRLCMFTSDVSARGMDYPDVSAVIQVGMPSDRAQYVHRIGRTARAGKSGVGVLMLADFEARAFLPQVADLHIAPAPALTAAEMAQLEPLASKGLAAVDPQTCGQGYQAFLGFYNSNLKRLRWTAAECVAMANHWAVDCVGCPEPPPIDPQTVGKMGLKNV 469
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Match: A0A1X6NNE1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNE1_PORUM)

HSP 1 Score: 333 bits (853), Expect = 1.100e-107
Identity = 177/304 (58.22%), Postives = 207/304 (68.09%), Query Frame = 1 
Query:    1 LLEMGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESTFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARL---SVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRG 903
            LL+MGFRPAIE +L  +P    RQTLLFSATMP DVR +  L+L+  Y  VDCVGEEE+T+ HV Q Y V     Q   L  +L     A P   K+I FF TAR+TQ  AEL   MG PVLEIHSRKSQ HR  V+  F NG GLV+FTSDVSARG+DY DV+ V+QVGLPSDKAQY+HRLGRT RAGK G G+LLL DFES FL  V+DLP+ R D    AS AQ++         ++RL   S   AYQAWLGFYN HL+R+ WSK  LVA AN W   +C + E P +QAKT+GKMGLRG
Sbjct:  203 LLDMGFRPAIEQLLSALPPKAGRQTLLFSATMPRDVRSMVTLSLRPNYSTVDCVGEEEATNTHVSQSYFVTPIAHQFPSLLHVLERARQAYPTNFKVIAFFATARMTQLAAELFIAMGVPVLEIHSRKSQPHRASVAAKFANGTGLVLFTSDVSARGVDYDDVTHVVQVGLPSDKAQYVHRLGRTGRAGKEGQGILLLSDFESIFLRSVQDLPLVRIDA--PASPAQLSEEAQRVAGFLSRLPGSSTTAAYQAWLGFYNSHLKRLNWSKEQLVANANSWYANVCGRAEPPALQAKTVGKMGLRG 504
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11130.991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2V2_9PHAE1.750e-21499.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUB6_ECTSI2.800e-21499.67DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDJ4_9STRA1.070e-12262.25P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4D8Q7_HETAK1.160e-12160.53Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0QEX6_9CRYP5.010e-12062.91Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S3XX82_HETAK7.250e-11960.53Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2UXM4_9STRA2.990e-11757.89Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0YY46_9CRYP1.020e-11659.54Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S1J8E5_9EUGL1.730e-11158.75Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]
A0A1X6NNE1_PORUM1.100e-10758.22Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11130contigEcto-sp13_S_contig11130:801..4940 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score604.7
Seed ortholog evalue2.3e-170
Seed eggNOG ortholog2880.D8LUB6
Preferred nameMSS116
Model size906
KEGG koko:K17679
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000372,GO:0000373,GO:0000375,GO:0000376,GO:0000377,GO:0000959,GO:0000963,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006351,GO:0006354,GO:0006390,GO:0006392,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010501,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0033592,GO:0034337,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0090615,GO:0097159,GO:0097367,GO:0097617,GO:0097659,GO:0140053,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576
Exons6
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0342@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-14_004380.1
EC3.6.4.13
Cds size897
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11130.991.1prot_Ecto-sp13_S_contig11130.991.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11130 801..4931 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462578.4626565-CDS-Ecto-sp13_S_contig11130:800..9591681462578.4626565-CDS-Ecto-sp13_S_contig11130:800..959Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11130 801..959 -
1681462578.4863625-CDS-Ecto-sp13_S_contig11130:2130..22681681462578.4863625-CDS-Ecto-sp13_S_contig11130:2130..2268Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11130 2131..2268 -
1681462578.500106-CDS-Ecto-sp13_S_contig11130:2684..27891681462578.500106-CDS-Ecto-sp13_S_contig11130:2684..2789Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11130 2685..2789 -
1681462578.5145078-CDS-Ecto-sp13_S_contig11130:3473..36261681462578.5145078-CDS-Ecto-sp13_S_contig11130:3473..3626Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11130 3474..3626 -
1681462578.522886-CDS-Ecto-sp13_S_contig11130:4292..44151681462578.522886-CDS-Ecto-sp13_S_contig11130:4292..4415Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11130 4293..4415 -
1681462578.5311425-CDS-Ecto-sp13_S_contig11130:4712..49311681462578.5311425-CDS-Ecto-sp13_S_contig11130:4712..4931Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11130 4713..4931 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462578.5457902-UTR-Ecto-sp13_S_contig11130:4931..49401681462578.5457902-UTR-Ecto-sp13_S_contig11130:4931..4940Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11130 4932..4940 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11130.991.1

>prot_Ecto-sp13_S_contig11130.991.1 ID=prot_Ecto-sp13_S_contig11130.991.1|Name=mRNA_Ecto-sp13_S_contig11130.991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=299bp
MGFRPAIEAILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDC
VGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTT
ARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDV
SARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFES
TFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLG
FYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGV
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mRNA from alignment at Ecto-sp13_S_contig11130:801..4940-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11130.991.1 ID=mRNA_Ecto-sp13_S_contig11130.991.1|Name=mRNA_Ecto-sp13_S_contig11130.991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4140bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11130:801..4940- (Ectocarpus species13 EcNAP12_S_4_19m)
CTCCTGGAGATGGGCTTTCGGCCCGCCATCGAGGCCATCCTGCGCTACAT
GCCGCACAGCCGCGACCGGCAGACGCTGCTCTTTTCGGCGACGATGCCCG
GCGACGTGCGCAAGATCGCGCAGCTCGCCCTGAAGGAGAGGTACGAGTTC
GTGGACTGCGTCGGGGAGGAGGAGAGCACGCACCAGCACGTTCCGCAGCA
GTACACGGTGTGCGGGCAGGACCAGCAGGTACATGCGCGCTACGGCTCTT
TGTCCCGGCAGCCTTCGCTGAGGGTTGTTCCATTATATTAAGTAAACGTG
TTTGGTAAACCACGCAGTCGGGGAAGCTGGGTTTGGGTTGTTAGGGGTAG
CGTCTGCGTACCCCCGTCTCTACGTCCTTTGAACCCGGCGGGCATAGGGA
GCGTGGCTGCGGGGGGCGGCGACCTTTCTGTCCGTACAGCGGTACACGAT
TGTGACTGTGTTTAGTATGTCCTGTTGTTATTTCATTGTCGCTGTTATTG
ACTTTCTTTTGTGTGTTCGACCCAGGTGGAGGAGCTGTGCCAGCTGCTTC
GCGAGAACATGGCGGCCGACCCTCGCGGGCACAAGATTATCGTGTTCTTC
ACCACGGCCCGCCTCACACAGTTCTACGCTGAGCTATGCAACCTCATGGT
GAGCCAGCCGAGCGAGCGGACCCGGCCGGCGGGCCGAGTCGGCGAAACAA
GTTGCCGGGAATCATTAGCTTTGCTTTTGCTTTGGTTTTGTGGGGAAGGT
CGTCGTTGTTTTTTTTTTTCACATGGGACCGGCACAGTTGAGCGCCTAGC
CGTCGGGGATCGTGGATTAATCGCAATGGACTATGCTTTTGGCGACTACG
CGGACTTTCGCGGTCTGATCCTGGAGGTGTTGATTGCACCAAGTAACACT
GCAGTGTCAACGGAATACCGTGTTTTAAGGGAATACCGCCTCTTAGGTGG
TGATGGTGATGGTGTAGTACTGCTGTTGTCATGTCGCCGAATGCGTAGAT
GAATGCCATGCCGAGAAGGACGGTGTGCCGTACGACTACCCAACAGTCCA
ACAAGCACTACAGTTGAACAACCGTTTGACGCCAAAAAGAACAGCAACAC
CAGATCGCTGCCACGTTAAACTTGGACTGCATCCAAAACCTAGAGCTAGC
CAGATGTGCGTGGCACACATACACCACCACACGTGTGCATCTACTTCGCC
CGGGCGCGCCGATGATGCGCACACAAGTAATCCATGAGTTGGTCGCCCTT
GTCTTTCTTGACCCTGCTCCTCTTGCTGGTGCTGTCCGATCTCAACGAAA
TGCCTTCAAACCAGGGCTTCCCTGTGCTAGAGATCCACTCCAGGAAGAGC
CAGGGGCACCGCAACAAGGTCAGCGAGTTGTTCCGCAACGGCCAAGGGCT
CGTGATGTTCACCAGCGACGTCTCAGCCCGTGGCATGGACTACCCGGACG
TGTCTGCCGTCATACAGGTGAAGGGTTTTAACAGGCAGCAGATGGGGCAG
CGGGGCAGCAATAGAGAGTGCTGCCGGACTTGCCAATCGAGACCTGTTTG
CTTGTTAAGGTGGTTCTCCTGCGACGTCGTGATTGGGCCTATTTGTGCGT
TGGCCCTTGTTGGAGCAGCTTATCACAGGCTGATCGAAATGCGGGGTGAT
TTTATGACCTTGATGAGCGGTTTATCTTTCGCTCTACTACGCGTGGTCCG
CGGGAAAGAAGAAAATGTCGCACGTCCTTCTCGTTTCTTGTTTTCGTTTT
TGCTTTAATTGTGCACACCGCCCAAGAAAGGAGATTGTTCTCCTTGCGAT
TTCTTGCGAGTGAAATTGGGACAACGGGGCGTCCTTTTCTTCGTTTTTTT
ACTGCCTGGCGTTAGAAGAATTTGCGCGGTAGTTGGGCTCAAAGGCCATA
CGTGTCTTCGTCCTGCCCCCGTCGCCCCCGACGAGCGTCATTCGAGAGAG
GCCAAGCGGGCCTTATGGCCGACAACAATCCATTGTAATGCCTTGTCTCC
TCGTGCGTGTTTCGATGTTTCATTCTACTTCAATCTCCGCTTCTTTTTTT
TTTTTTGAAGCATTTTGTCGTCTGTTCTCACGTGCACGCGCGTGTCTCTC
CGTGTCACCGTCGGTGCGTATCCCGTGTGTTTTTTTCGCCCTCTGAATTA
GGTCGGGCTGCCGTCCGACAAGGCTCAGTACATTCACCGTCTAGGGCGTA
CCGCCCGCGCAGGAAAGGCTGGTCATGGCGTGCTGCTCTTGTGCGACTTC
GAGTCGGTGCGTTGTTGCTTTTTTTCAGTGTCCTTTCTTCCTGGTTCTTA
ATCTAATCTCCGGCGAGGTTCTCTCCGTTTCTGTTTCTGTGGTAAGGTAT
GCTGCCTTCGTTCTTTGTTCGCACCAGTACTGTTGTTGTGGGTTGGTGCC
GAAGGCGTAGATTGGTAGAACCATGCCTTTAGTACGACACATGTCCCTCG
ACTGACGGATTGCTCTCTCTTTTTTATCTCTCTACGGTCGTAGTACGATG
TAGAGATTATTTATTTATCCCCTGTTTGGTATGACTTCGCCCGTGACGGG
TGACATGGACATATATATGATACATTGTTGTAATCTCGCACCCCACAACA
GGTGTCGTTGTGTGTTTCGACGCGCCTTGTTCTAATTCGATTCTCTGTCT
TTTCCTTTTTTCTTTTTGTTAGACGTTCCTGTCCGATGTGAGGGACTTGC
CCATGCAGAGACGAGACCCTCTGCCCAAGGCGTCGGTGGCCCAAATCACC
CCCGCCGTGAGCGAGGCGTACGACAAGATGGCCCGCCTTTCGGTCGTTTG
CGCCTACCAGGTATGTGTTTATATTATTTGCATCGACCGCGCTAACCGGC
TGACCAATGACAAATACGTCAGTCTCAGTGCGGTTGAAAACACACTACAC
TTTTTTGAAAATGCTTGCCATGAGCTGGGACCCCATGAGGGGGTGTCATG
GGGGAGTATGTGTGTGTGTGTGTGTGTGTGTGTTTTCTTTATATTTGCGT
CGACCGTGCTAGTCGGGTGACAAATGAGAATGAAGAGGCGACAGCCTTGT
AGCGGGATGAAAAACCCAAACACTTTCCAGTCAAAGGGCAAGGATCCTCC
CGACAGTGTGTGTGTGTGTGTGTGTGTTTTTTTGTTTATTCGTTGGCGCT
GGGTCTCTCGTTGTAGCGGTGGTGTGTGTGTTGTTCCAGGGCACTTCGCA
CCGGTGAGGTAGCACCTTTCGCATCTGACGTTGCCCGGAGACGTCAGACG
CTGAAGGTGAAGGTCCTGCCTCACCTGGACGAAGTGCCCTGGAACAACAC
ACACACCACCCTCTGCACTGCGGGCGATAGGAGCGCAGGAGCAGTGTCCA
TCTGTTTTCGACGTTGCGCTTTTTCATCTTCATCTTCCTCTTGCTCTTGT
TGTTGGTTGCAGTTTTTGTATCGTGGTGGTGCGTTTTGGTGGAGGTGATG
GTGGCGTGTAGCAACGGCTCTCGAACAAAATTATCGCGGAGCCCCACACG
TACGTCCTTGGCTTGTGACGATACAAGCGCGCTCTCGCGACCAGACGAAT
GGGCCCTGCAGCAGTAGCAGCAGCAGCAGCGAAAACGGCAACCACCGAAA
ACGTGCGGGTGAACGCACCGTTGTGCGATCAATTTTTCAAGCTTGATTAC
TCCATATCAAAGAGGCTGTCACTACCGGAAAAGTGTTTTTGGAAAGATAT
CGTCATGATCTTTTTTTACGTTGCACGTATCCGTCTGATGTCGCGTCGCC
TTGGTTGTGGTGTGGAGCAATCGATATTTTTTTATGTCGACCAATGGGAC
ATATTTAGGCTGGGTGTTCTTTTTTTTTACGGATACGTCTCCGTTTTGGG
GGCGCAGCAATATTGCACCGCCTGTGCGTTTGTCCGTACTTGGACGGCAC
CTCCTGTGCATCGCACCCTACAAATCATAGTAAACGAGACCGGTAAACCA
TCCTTGCGTTCTTATCTCTACTCTGCGAAAGGCTTGGCTTGGGTTCTACA
ACGGACACCTGCGCCGCATCGGGTGGAGCAAGGCAGACCTCGTAGCGCAG
GCCAACTACTGGATCACCACCATCTGCCGCCAGCAAGAGGTCCCGGGGAT
CCAGGCCAAGACGCTCGGGAAGATGGGGCTCCGCGGGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11130:801..4940-

>mRNA_Ecto-sp13_S_contig11130.991.1 ID=mRNA_Ecto-sp13_S_contig11130.991.1|Name=mRNA_Ecto-sp13_S_contig11130.991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=897bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11130:801..4940- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCTTTCGGCCCGCCATCGAGGCCATCCTGCGCTACATGCCGCACAG
CCGCGACCGGCAGACGCTGCTCTTTTCGGCGACGATGCCCGGCGACGTGC
GCAAGATCGCGCAGCTCGCCCTGAAGGAGAGGTACGAGTTCGTGGACTGC
GTCGGGGAGGAGGAGAGCACGCACCAGCACGTTCCGCAGCAGTACACGGT
GTGCGGGCAGGACCAGCAGGTGGAGGAGCTGTGCCAGCTGCTTCGCGAGA
ACATGGCGGCCGACCCTCGCGGGCACAAGATTATCGTGTTCTTCACCACG
GCCCGCCTCACACAGTTCTACGCTGAGCTATGCAACCTCATGGGCTTCCC
TGTGCTAGAGATCCACTCCAGGAAGAGCCAGGGGCACCGCAACAAGGTCA
GCGAGTTGTTCCGCAACGGCCAAGGGCTCGTGATGTTCACCAGCGACGTC
TCAGCCCGTGGCATGGACTACCCGGACGTGTCTGCCGTCATACAGGTCGG
GCTGCCGTCCGACAAGGCTCAGTACATTCACCGTCTAGGGCGTACCGCCC
GCGCAGGAAAGGCTGGTCATGGCGTGCTGCTCTTGTGCGACTTCGAGTCG
ACGTTCCTGTCCGATGTGAGGGACTTGCCCATGCAGAGACGAGACCCTCT
GCCCAAGGCGTCGGTGGCCCAAATCACCCCCGCCGTGAGCGAGGCGTACG
ACAAGATGGCCCGCCTTTCGGTCGTTTGCGCCTACCAGGCTTGGCTTGGG
TTCTACAACGGACACCTGCGCCGCATCGGGTGGAGCAAGGCAGACCTCGT
AGCGCAGGCCAACTACTGGATCACCACCATCTGCCGCCAGCAAGAGGTCC
CGGGGATCCAGGCCAAGACGCTCGGGAAGATGGGGCTCCGCGGGGTG
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