mRNA_Ecto-sp13_S_contig11119.978.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: D7FT51_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT51_ECTSI) HSP 1 Score: 361 bits (926), Expect = 8.880e-122 Identity = 201/212 (94.81%), Postives = 205/212 (96.70%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCDDAGGAGPGQAMLSDFYFSRFDDEVLLQEADFFFPMGCASQAXXXXXXXXXXXXXX---RYVVGVVPAKKLGECAQGVAQMVG 627
LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHEC+Q VTKFLLEKASKAGRGSEME+VLGEGTQ KVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCDDAGGAGPG AMLSDFYFSRFDDEVLLQEADFFFPMGCASQAXXXXXXXXXXXXXX RYVVG++PAKKLGEC QGVAQMVG
Sbjct: 232 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECVQAVTKFLLEKASKAGRGSEMEEVLGEGTQEKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCDDAGGAGPGLAMLSDFYFSRFDDEVLLQEADFFFPMGCASQAXXXXXXXXXXXXXXXXXRYVVGIMPAKKLGECVQGVAQMVG 443
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: A0A6V1VD28_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VD28_HETAK) HSP 1 Score: 110 bits (275), Expect = 2.970e-25 Identity = 62/159 (38.99%), Postives = 96/159 (60.38%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCDDAGGAGPGQAMLSDFYFSRFDDEVLLQEA 477
L D+ VAQ +VGT++ ++ +D VF F+T L L++ K+ ++ +T L K +A + +E E++L K GL++S RMIN P+Q +P LH +L +DI WA ENEISEEHR +F D I ++PC+ G Y++ F++E+ QEA
Sbjct: 130 LADIIVAQASVGTLVCSEDED--VFAFITVLNLQF-RKDSRSIKQITDTLASKCPQASK-TEFEEILDSN---KTGLVISRRMINLPLQLIPPLHSSLQDDIDWAKENEISEEHRNQFNLDHLIFLSPCEIVGAG-------KTVYYTHFEEEIFSQEA 274
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: A0A3M6VP95_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP95_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.180e-21 Identity = 64/168 (38.10%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCDD--AGGAGPGQAMLSDF-------YFSRFDDEVLLQEA 477
L + V Q GT++ + +DD V+GF+TAL LK KE MQ V +++ +K + +++ +L VGL+++ERM+N P Q VP LH AL EDI WAIENE ++E R F+ D F+++A C + G +G ++ S +F F+DE L QEA
Sbjct: 115 LANAIVGQVTAGTMVCVEGEDD-VYGFITALNLKIFEKETS-MQQVVQYVTKKCPNSDL-PKLQQILNTKN---VGLVLNERMVNLPYQLVPALHSALHEDIEWAIENEDTQELRNSFQMDYFLILATCSEEKTGSSGSTKSKKSKTTYEQTARFFHNFEDEFLEQEA 276
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: A0A3R7GKF3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GKF3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.420e-21 Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCDDA-----GGAGPGQAMLSDF-----YFSRFDDEVLLQEADFFF 489
L + V Q GT++ + +DD V+GF+TAL LK +E Q +L+ +K SE+ + VGL+++ERM+N P Q VP +H AL EDI WAIENE +EE R F+ D F+++A C + GA G+ + + F+ F+DE L QEAD F
Sbjct: 119 LANAVVGQVTAGTMVCVEGEDD-VYGFITALNLKSFTQETSVQQ-----ILQYVTKKCPNSELPRLQQILNTKNVGLVLNERMVNLPYQLVPAVHSALHEDIEWAIENEDTEELRNSFKMDYFLILATCTEEKSGGNDGAKKGKKTKTTYDQTVKLFNNFEDEFLEQEADLSF 285
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: D0NE35_PHYIT (BCCIP family protein n=22 Tax=Phytophthora TaxID=4783 RepID=D0NE35_PHYIT) HSP 1 Score: 98.2 bits (243), Expect = 5.890e-21 Identity = 63/172 (36.63%), Postives = 98/172 (56.98%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCDD----AGGAGPGQAMLSDF-----YFSRFDDEVLLQEADFFF 489
L + V Q GT++ + +DD V+GF+TAL LK E +Q + +++ +K S+++ +L VGL+++ERM+N P Q VP LH AL EDI WAIENE +EE R F+ D F+++A C + + G+ G+ + + +F F+DE L QEA+ F
Sbjct: 112 LANAIVGQVTAGTMVCVEGEDD-VYGFITALNLKSFVNETS-IQQILQYVTKKCPSTEL-SKLQQILNTKN---VGLVLNERMVNLPYQLVPALHSALHEDIEWAIENEDTEELRNSFKMDYFLILATCTEEKSGSSGSKKGKKSKTAYEQTAKFFHNFEDEFLEQEAELSF 277
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: A0A662WXS7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WXS7_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.270e-20 Identity = 66/170 (38.82%), Postives = 93/170 (54.71%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCD-DAGGAGPGQ----------AMLSDFYFSRFDDEVLLQEA 477
L + V Q GT++ + +DD ++GF+TAL LK A+E Q +L+ +K +E+ + + VGL+++ERM+N P Q VP LH AL EDI WAI NE +EE RE F+ D F+V+A C + G G G A + F F F+DE L QEA
Sbjct: 113 LANAVVNQVTTGTMVCVEGEDD-IYGFITALSLKRYAQETSVQQ-----ILQYVTKKCPSAELPRLQQILSTKNVGLVLNERMVNLPYQLVPALHSALHEDIEWAITNEDTEELRESFQLDYFLVLATCTVEKSGGGDGSKKGKKTKTAYAQTAKF-FHNFEDEFLEQEA 275
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: A0A0U9HQM6_KLENI (Protein BCCIP homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HQM6_KLENI) HSP 1 Score: 94.0 bits (232), Expect = 2.390e-19 Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVV---------APCDDAGGAGPGQAMLSDFYFSRFDDEV 462
LVDL +AQ VG+V+ T D+D + G +T L + K+ E + + +FL + K + +VL +G +G+VGLLVSER+IN P+ P LH+ L ++I+WA E+E +EE RE FRF K++++ A AG + G S + + +DE+
Sbjct: 110 LVDLVLAQTTVGSVIKTTEDEDPI-GLLTVLAFERY-KDTEPTKQIVRFLRLRCKKDEHTAGKLEVLLDGKKGRVGLLVSERLINVPLDLAPPLHQGLFDEISWATEDEPTEELRESFRFSKYLLLTRVFEETQRADRQAAGPSSRGGDPSSSTIYMKPEDEI 270
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: A0A812YV05_9DINO (Bcp1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YV05_9DINO) HSP 1 Score: 93.2 bits (230), Expect = 5.950e-19 Identity = 51/130 (39.23%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDA-VFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPC 387
L DL VAQ +VGT+++ ++ + F TAL + A ++ V K+LL KA A + S + + G GL++SERM+N P + P L+ L++D+AWA ENE+SEEH+++F F +F+++APC
Sbjct: 93 LADLIVAQASVGTMVTVPHEEGGDAYAFATALNVSRHAAAPS-LKAVRKYLLGKAPSAVKRSALAKAW-DAEDGATGLILSERMLNMPPEIAPTLYSCLMDDLAWARENEVSEEHKQQFHFKRFVLIAPC 220
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: A0A484E0F7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0F7_BRELC) HSP 1 Score: 92.8 bits (229), Expect = 6.640e-19 Identity = 61/171 (35.67%), Postives = 93/171 (54.39%), Query Frame = 1
Query: 1 LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVAPCDDAG----GAGPGQAMLSDF----YFSRFDDEVLLQEADFFF 489
L + V Q VGT++ + +DD ++GFVT L +K E Q +L+ +K +E+ + + VGLL++ERMIN P Q +P LH AL EDI WA ENE +EE R+ F+ D F+++A C + G+ G+ + + +F F+DE QEA+ F
Sbjct: 122 LANAIVRQVTVGTMVCAEGEDD-IYGFVTTLNMKRYVTETSFQQ-----ILQYVTKKCPITELPKLQHILSTKNVGLLINERMINLPYQLIPPLHSALHEDIEWAFENEDTEELRDSFKLDYFLLLATCTEESSSNIGSKKGKKSKTAYEQMKFFHNFEDEFFEQEAELSF 286
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Match: A0A1R3I009_COCAP (Protein BCCIP homolog n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I009_COCAP) HSP 1 Score: 92.4 bits (228), Expect = 8.200e-19 Identity = 51/128 (39.84%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 4 VDLAVAQGAVGTVLSTD-ADDDAVFGFVTALPL-KYLAKEHECMQTVTKFLLEKASKAGRGSEMEDVLGEGTQGKVGLLVSERMINCPMQAVPKLHEALVEDIAWAIENEISEEHREKFRFDKFIVVA 381
VDL + Q VGTV+ + A+DD VF ++AL + +Y K+H+C+ + +FLL + + + + +LG+ Q VGLLVS+R++N P + +P L++AL ++++WAIE+E +EE R FRF+ +I+V+
Sbjct: 110 VDLILGQPTVGTVVKLENAEDDGVFSVISALNMGRY--KDHKCITELKEFLLNRCQEKEKIGNLRSLLGDKAQ-DVGLLVSQRVVNLPPELLPHLYDALFDEVSWAIEDEPTEELRNSFRFNFYIIVS 234 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11119.978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11119.978.1 >prot_Ecto-sp13_S_contig11119.978.1 ID=prot_Ecto-sp13_S_contig11119.978.1|Name=mRNA_Ecto-sp13_S_contig11119.978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp LVDLAVAQGAVGTVLSTDADDDAVFGFVTALPLKYLAKEHECMQTVTKFLback to top mRNA from alignment at Ecto-sp13_S_contig11119:3046..5555- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11119.978.1 ID=mRNA_Ecto-sp13_S_contig11119.978.1|Name=mRNA_Ecto-sp13_S_contig11119.978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2510bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11119:3046..5555- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11119:3046..5555- >mRNA_Ecto-sp13_S_contig11119.978.1 ID=mRNA_Ecto-sp13_S_contig11119.978.1|Name=mRNA_Ecto-sp13_S_contig11119.978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=630bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11119:3046..5555- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |