mRNA_Ecto-sp13_S_contig11111.972.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11111.972.1
Unique NamemRNA_Ecto-sp13_S_contig11111.972.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: D8LU99_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU99_ECTSI)

HSP 1 Score: 676 bits (1743), Expect = 3.700e-238
Identity = 338/347 (97.41%), Postives = 339/347 (97.69%), Query Frame = 1
Query:    1 YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVMYDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGASLFVTTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAVDVDGDGMEMRYEWYKDGFGDLLMMALPHHMDTMDAGADIGVVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDNE 1041
            YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIV YDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAE GASLF TTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVA DVDGDGMEMRYEW KDGFGDLLMMALPHHMDTM AGADI VVMADSYQCIKGPMTGIVGSVWTM DNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTT+GVYLTPWMKNDNE
Sbjct:  165 YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVKYDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEAGASLFATTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAFDVDGDGMEMRYEWDKDGFGDLLMMALPHHMDTMGAGADIAVVMADSYQCIKGPMTGIVGSVWTMWDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTVGVYLTPWMKNDNE 511          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: A0A6H5JC22_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC22_9PHAE)

HSP 1 Score: 665 bits (1717), Expect = 3.810e-231
Identity = 333/347 (95.97%), Postives = 334/347 (96.25%), Query Frame = 1
Query:    1 YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVMYDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGASLFVTTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAVDVDGDGMEMRYEWYKDGFGDLLMMALPHHMDTMDAGADIGVVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDNE 1041
            YTIKSSDAGVGVSYSAMRRVESLERV DAYAADLSVSAKEGVTGRHIV YDNLTVTLQHDAAN GNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGASLF TTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLP PWDSEGEMTLSEHAYAYPRGGRVA DVDGD MEMRYEW KDGFGDLLMMALPHHMDTMDAGADI VVMADSYQCIKGPMTGIVGSVW MRDNLTDIAWTARTPLQEA LSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIP REAAL T+GVYLTPWMKNDNE
Sbjct:  165 YTIKSSDAGVGVSYSAMRRVESLERVTDAYAADLSVSAKEGVTGRHIVKYDNLTVTLQHDAANAGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGASLFATTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPRPWDSEGEMTLSEHAYAYPRGGRVAFDVDGDRMEMRYEWDKDGFGDLLMMALPHHMDTMDAGADIAVVMADSYQCIKGPMTGIVGSVWIMRDNLTDIAWTARTPLQEATLSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPGREAALATVGVYLTPWMKNDNE 511          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: A0A836CER9_9STRA (Endo-1,3(4)-beta-glucanase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER9_9STRA)

HSP 1 Score: 221 bits (562), Expect = 6.020e-61
Identity = 149/475 (31.37%), Postives = 214/475 (45.05%), Query Frame = 1
Query:    1 YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVMYDNLTVTLQHDAANEGNFRTLLARGSPYMTF--------------------------------------EFAGATPRIKANGDILEINGKKAEVGASLFVTTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGR------------------------------------VAVDVDGDGMEMRYEWYKDGFGDLLMMALPHHMDTMDAGADIGVVMADSYQCIK--------------------------------------------------GPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAA----DLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREA-ALTTMGVYLTPWMKNDN 1038
            Y +++   G+ VS+SA+RR  S  R+ D + ADL+V A EG  G  +  YDNL+ ++ H+      F T L RGSPYMTF                                      ++  ATP +     IL ++GK  + GA++   TFKL LSNWETW+V+TSESV++KV +     +  P SG++R A+LP   D E E  L+EHAYAY +GG                                     +  DVDGD +  ++ W K GFGDLLM+ALPHH+D MD      V M  +YQ +K                                                  G MTG+VG+ W MR+ LT + W                 L+  W     D + A    D+++  P+A D+Y F K+ +RMARLAL+A+ELG++  R+  A++ +   +  W++NDN
Sbjct:  174 YAVRAGAHGIDVSFSAVRRQASRRRITDVFDADLTVGAAEGYLGHALTRYDNLSASVSHELRGGAAFATHLVRGSPYMTFAAEREPAAALLAXXXXXXXXXXXXXAPAMSFGPLIRAAQYKDATPTLATATSILALDGKPLKEGATVRGKTFKLGLSNWETWMVYTSESVSFKVEARSFTALM-PMSGMLRAALLPRAGDGEAEFELNEHAYAYAKGGEXXXXXXXXXXXXXXXXXXXXXXXXXXTQLGFDRDTLIQFDVDGDTLVTKFVWEKYGFGDLLMLALPHHIDMMDMETT-EVAMPKAYQTLKPXXXXXXXXXHQTLEASAAVLIEVEALPRHIKPXXXXXXXXXXXXXXXRKGRMTGVVGTSWEMREALTAVGWGTGG-------------LAGGWGADRADEIRAELVKDISTEHPTAADIYGFSKQSARMARLALIAEELGEMGYRDQQAVSVIEDAMAAWLRNDN 633          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: UPI000C784AC5 (probable endo-1,3(4)-beta-glucanase ARB_01444 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C784AC5)

HSP 1 Score: 183 bits (464), Expect = 1.230e-48
Identity = 121/353 (34.28%), Postives = 185/353 (52.41%), Query Frame = 1
Query:    1 YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVMYDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGASLFVTTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAVDVDGDGMEMRYEWYKDGFGDLLMMALPHHMDTMDAGADIGVVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDNEVRGLHD 1059
            Y +K+ D GV VS+S   +V   + +  A+  ++ ++A EG+  R +  +D L+VT+ +D   E  F     RGSPY+T +++G TP + +   ++ +NG+   VG+ +    F + L+N + W+V+TS  V++ V S   +    PF+G +RVA +P     E    L  HA + P GG V  +  GD   + + W  +G G+ L+MALPHHMD + +    G+     Y  IKG MTGI+GSVW M + LT I W A  P   A   +D           +RDAL AD+  +   A D Y  GKE+  +ARLAL+ADELG+          +   + PW+   N     +D
Sbjct:   77 YQVKTLDDGVHVSFS--NKVVEAKYIFMAFVPNIIITAMEGMGSRVLSAWDPLSVTMAYDKV-EFPF----VRGSPYITAKYSGKTPILASTHAVISVNGEA--VGSQITGNKFDVDLNNGQHWMVYTSSDVSFYVNS-DSLSASGPFTGTLRVACVP---PGENSADLDAHAGSIPIGGEVTAESAGDTATITFTWKLEGSGEPLIMALPHHMDILQSPQTGGI----RYNTIKGDMTGIIGSVWKMTERLTSIQWDA--PRGVAPKYLD----------AVRDALKADIG-IQVVAGDPYFGGKEMGTLARLALIADELGETELAATYRENIKKAMEPWLAGTNSDHFTYD 399          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: A0A850BQD1_9DELT (Endo-1,3(4)-beta-glucanase n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A850BQD1_9DELT)

HSP 1 Score: 180 bits (456), Expect = 1.320e-47
Identity = 111/316 (35.13%), Postives = 167/316 (52.85%), Query Frame = 1
Query:   97 DLSVSAKEGVTGRHIVMYDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGASLFVTTFKLALSNWETWVVFTSESVT--WKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAVDVDGDGMEMRYEWYKDGFGDLLMMALPHHMDTMDAGADIGVVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDN 1038
            D+S    E +  R  V YD L+VT++    + G+    + RG PY T  +   TPRI++   I  +N   A   + +    F++AL+N +TW+++ S  +T  W  + +      APF+G++R A +     +    TL  H  AYP+GG V V V GDG  + + W K+G G LLMMALPHH+D + +  D+  V    Y  ++G M G+VG  WT+ + L  I+W+A  P+  AA  +D           ++ AL AD + V P A D Y FGK+I+++ RL L+ADELG+     A    M   L PW+   N
Sbjct:   85 DISFETVEALKDRTAVDYDLLSVTMRWQGVSAGSMTAPIVRGMPYATMVYDNLTPRIESAHAITSVNKGAA---SPVMGDRFEIALNNGQTWLLYASSPLTLSWSPSGMAA---SAPFTGVLRTAAVS---SATFTATLDAHRGAYPKGGDVLVSVQGDGARIDFSWEKEGDGALLMMALPHHLDVLSS-PDLSDV---KYPTLRGEMVGVVGGSWTLAETLHTISWSAPRPV--AADKVD----------AVKAALMADASEV-PVATDPYFFGKQIAKLGRLVLIADELGEAATAAALREQMRNSLNPWLDGTN 374          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: A0A3D6DEQ1_9FLAO (Endo-1,3(4)-beta-glucanase (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A3D6DEQ1_9FLAO)

HSP 1 Score: 160 bits (405), Expect = 5.720e-40
Identity = 118/351 (33.62%), Postives = 172/351 (49.00%), Query Frame = 1
Query:   28 VGVSYSAMR-----RVESLERVADAYAADLSVSAKEGVTGRHIVMYDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGASLFVTTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEG--EMTLSEHAYAYPRGGRVAVDVDGDGMEMRYEWYKDGFGDLLMMALPHHMDTMDAGADIGVVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDNEVRGLHD 1059
            V V  SA+R     +V S   +   +  +L+  A  G+  R I  Y  L V +   +   G+    L RG PYMT  + G TPR+     I+ +NG  A    S+  T F + L+N +TW+V+ S +VT  V+    V     F+G +R A+      S+G  E  L  HA   P GG V+    GD  E+ ++W  +G G LLM+ALPHHMD + +    G+V       +KG MTGI G  WTM + LT I + +   ++ A             E+ +R+ALA D+   + +APD Y  GK+ S +ARLAL+ADELG+          +G  L   +   N    L+D
Sbjct:   80 VQVDNSALRFGFPGKVVSQNYILTTFTDNLNFGAVGGLPARQITDYGPLHVRVDWGSGT-GSMHANLVRGQPYMTAHYNGLTPRVGTVHAIIGLNGGSAS--GSVTGTKFVMQLNNGQTWIVYASSTVTMSVSGGALVA-SGSFTGTLRAAL------SQGGDEAVLDAHAGRIPVGGEVSATATGDMGELVFDWETEGSGPLLMLALPHHMDVLSSPTTPGLVR----NTLKGDMTGISGLAWTMEEPLTTIGFESPNGIEPAL------------EQDVRNALAQDIGFAV-TAPDPYFGGKQFSALARLALIADELGETTLANGYRNALGSALEERLAGQNGDPLLYD 403          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: W7TQI2_9STRA (Endo-1,3(4)-beta-glucanase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQI2_9STRA)

HSP 1 Score: 157 bits (397), Expect = 6.300e-39
Identity = 119/396 (30.05%), Postives = 193/396 (48.74%), Query Frame = 1
Query:    1 YTIKSSDA-GVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVMYDNLTV-----TLQHDAANEGNF-RTLLARGSPYMTFEFAGATPRIKANGDILEING-----KKAEVGASLFVTTFKLALSNWETWVVFTSESVT--WKVT-SLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAVDVDGDG------------MEMRYEWYKDGFGDLLMMALPHHMDTMDAGADIGVVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSID----DPLLSLSWERRMRD---------ALAADLNSVLPSAP---------DVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDNE 1041
            Y +K++D  G+ VSYSA R + +   +AD +A D+S++  E  T  ++  YD L+V     T+ H   N  ++ RT L RG PY+T E+ G  PR+KA   I  ING           A+L  + F + + + + W++F    +T  W +  SL  VE   P++G +RVAV P     + +  L +H + YP GG V+++  G G            + + Y W + G G LLM+ALPHH++ +   A +     D +Q +KG MTG+VG  W M++ L      +    ++  ++      + +      R ++D         A++ DL ++              D Y  GK ++  ARLALVA+E+G    R+ A+      L PW+K  N+
Sbjct:  156 YAVKATDTEGLQVSYSAFRHLSTAMVIADLFAPDMSLATVENATTHYVESYDPLSVGLVFPTVLHLQGNRPSYYRTHLVRGCPYVTVEYYGCRPRVKAPNMITVINGLLFRENATFQAAALTGSVFDITVISGQHWMLFAEPPITLVWTIDGSLTAVE---PYTGFLRVAVAPV---EKVKPVLVKHWHTYPTGGEVSLEYPGRGGVTGGRGSSDSDLMITYRWRRRGEGQLLMLALPHHVEILQDAAFL-TNATDVFQTLKGSMTGVVGDRWYMKEGLPRPLDASDPTKKKKKVTRSHAGREHMYGFHAPRGIQDEKALKAVQGAVSEDLAAIKKGGTERWNKTDKSDAYWAGKRMAMYARLALVAEEVGMEKERKEAVALAAAALEPWLKGSNK 544          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: A0A6G0XYJ7_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYJ7_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.340e-34
Identity = 103/361 (28.53%), Postives = 165/361 (45.71%), Query Frame = 1
Query:    1 YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVMYDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGASLFVTTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAP--FSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAVDVDGD-GMEMRYEWYKDGFGD-----LLMMALPHHMDTMDAGADIGVVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDNEVRGLHD 1059
            YT+      + +SY    RV +   + + + +++ V    G     +  +D L+VT++   A+ G     L RGSPY+T EF GA P I ++ +I+ +        A+L          NW  W++FTS   TW   + Q  +   P  F G++R+A+  H      +  L+ HA  YP G  +A     +   ++ + W    F       LLM ALPHH+DT  A       +   + C++GPM G++G VWT  + LTD+ W    P+     S   P  + + E  +R +L  D++     A D Y+FGK+  R ARL L A       A    LT +   +  W+  +N    ++D
Sbjct:   67 YTVSIQKNQLHISYPF--RVVTSRSIIEGFTSEIIVEL--GTQPLQVRRFDELSVTVEFPQASGGVIALHLVRGSPYITLEFHGAAPTISSSINIVSLTPASNYTQATL---------GNWHQWLLFTSSPFTW---TQQGKKWSGPSNFDGVLRIALALH---ENTKPILAAHASVYPVGASIAFKPTNETNADVTFSWQTRSFNSTSPASLLMAALPHHIDTFSANQAFAPEI--QFMCMRGPMKGVLGDVWTFHEPLTDVPWDY--PIDGVFKSPTSPEYNTTVEF-IRTSLDKDIDRFPAFAEDSYNFGKQFGREARLVLTAHRFNSTTAFTKGLTKLQNQIAKWLTGNNTNHFVYD 403          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: A0A5D6XK97_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XK97_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.640e-34
Identity = 120/425 (28.24%), Postives = 184/425 (43.29%), Query Frame = 1
Query:    1 YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKE--------------GVTGRHIVMYDNLTVTLQHDAANEG----------NFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVGA---------SLFVTTFKLALSNW---------ETWVVFTSESVTWKVTSLQEV---------EMKAP----------FSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAVDVDGDGMEMRYEWYKDGFG-------DLLMMALPHHMDTMD----AGADIGVVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDNEVRGLHD 1059
            YT++S    + VSY   RRV + E V + + AD+SV+                   T R I  +D L+VTLQ+   NE            F  LL RGSPY+T E+    P ++ N  ++ +N K   V A         +     F+L L  +         + WVV+ +   T ++    E          E+  P          +SG +R+A++P P   +    L   A  YP    V   V+     + + W     G        LLM+A PHH+        A A+  V+    ++ +K  MT ++GS WT+ + L  I + A  P Q A            +   ++ +LA D N   P A D Y FGKE+ R ARLAL+AD +GD+  R+A L+ +  +LTPW+   N+   ++D
Sbjct:  151 YTVRSLPKRLDVSYGDTRRVVTNESVTEYFNADVSVTGYSRRVRDSASALLGDGNSTSRSIAAFDPLSVTLQYHFENETAATASGAERHQFAALLVRGSPYLTIEYKQLIPVLELNATLVAVNQKPVAVAAGDDQQPPPQNWTAKRFELDLEVYGAARGPAAAQKWVVYFATERTLRLQFAGEKDYRPYNLRGELTTPTNVRLVDADVYSGAMRIAIVPSP---DAVALLDASADVYPVSAAVGARVENGSAYVSFNWTTKSLGGSAAPTAQLLMLASPHHVAAFSQAAIAAAEFKVLGMLGHRTVKSNMTAVLGSAWTVEEALPGIGFDA--PQQVA---------KPEYVAAIKASLANDSNYT-PEAQDPYFFGKEVGRQARLALIADSIGDVATRDALLSDLEHWLTPWLVGSNDNHFVYD 560          
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Match: A0A1V9YWQ0_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWQ0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 5.140e-34
Identity = 112/382 (29.32%), Postives = 182/382 (47.64%), Query Frame = 1
Query:    1 YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVMYDNLTVTLQHDAANE-GNFRTLLARGSPYMTFEFAGATPRIKANGD---ILEINGKKAEVG-----ASLFVTTFKLALSNWETWVVFTSESVTWKVTS-LQEVEMKAPFSGIVRVAVLPHPWDSEG-EMTLSEHAYAYPRGGRVAVDVDGDGMEMRYEWYKD-------GFGDLLMMALPHHMDT------------MDAGADIG------VVMADSYQCIKGPMTGIVGSVWTMRDNLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPDVYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDN 1038
            YT+ S ++G+ VSY   RRV     + + +A DL  S+      R +V +D L V L+    N  G F  LL+RGSPY++ ++ G  P++   G+   I  +N  + + G     AS F    ++  +  + W+VF   +VT  +      V     F GIVR A+LP     +  +  L   A   P    + +    +   M++ W          G  DLLM+A PHH+D             +D+  DI       ++    ++ +KG +T +VGS WT+ + LT + ++A  P+        DP    S  + + ++L  D  S +P A D Y FGKEI+R ARLAL+A++LG+   R++ +  +  +L PW+   N
Sbjct:  150 YTVISLNSGLQVSYGDDRRVGDNAIIQEYFADDLVFSSNPPPNTRQVVWFDQLNVKLEFKRNNHHGTFNALLSRGSPYISVKYKGMVPKLSLGGNVGAITSVNDIQIKTGTISLTASEFHFHTRIERNIVQEWIVFFPNNVTLAIDPHTATVTGVDTFYGIVRAALLPQGQQKDTFKALLLRLANTVPVATDIEMATVNNTGVMKFSWRNKLMNPNNTGDNDLLMLAFPHHVDAFGEAPLANLSTILDSRPDIESNGSFKILGKMGHRTLKGNLTAVVGSTWTIVEPLTTVRFSAPRPI--------DP----SKRKDIANSLVRDA-SYVPGAKDPYFFGKEIARQARLALIANKLGNFAVRDSLVAKLQGWLLPWLTGKN 518          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11111.972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU99_ECTSI3.700e-23897.41Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sili... [more]
A0A6H5JC22_9PHAE3.810e-23195.97Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. ... [more]
A0A836CER9_9STRA6.020e-6131.37Endo-1,3(4)-beta-glucanase n=2 Tax=Tribonema minus... [more]
UPI000C784AC51.230e-4834.28probable endo-1,3(4)-beta-glucanase ARB_01444 n=1 ... [more]
A0A850BQD1_9DELT1.320e-4735.13Endo-1,3(4)-beta-glucanase n=1 Tax=Polyangiaceae b... [more]
A0A3D6DEQ1_9FLAO5.720e-4033.62Endo-1,3(4)-beta-glucanase (Fragment) n=1 Tax=Flav... [more]
W7TQI2_9STRA6.300e-3930.05Endo-1,3(4)-beta-glucanase n=2 Tax=Monodopsidaceae... [more]
A0A6G0XYJ7_9STRA1.340e-3428.53Endo-1,3(4)-beta-glucanase n=1 Tax=Aphanomyces eut... [more]
A0A5D6XK97_9STRA1.640e-3428.24Endo-1,3(4)-beta-glucanase n=1 Tax=Pythium brassic... [more]
A0A1V9YWQ0_9STRA5.140e-3429.32Endo-1,3(4)-beta-glucanase n=1 Tax=Thraustotheca c... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11111contigEcto-sp13_S_contig11111:810..5124 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score676.4
Seed ortholog evalue7.2e-192
Seed eggNOG ortholog2880.D8LU99
Model size1062
KEGG koko:K01180
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.chitin catabolic process
EggNOG OGsCOG5498@1,KOG2254@2759
Ec32 ortholog descriptionEndo-1,3-beta-glucanase, family GH81
Ec32 orthologEc-14_004220.1
EC3.2.1.6
Cds size1062
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11111.972.1prot_Ecto-sp13_S_contig11111.972.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11111 810..5124 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462576.9351175-CDS-Ecto-sp13_S_contig11111:809..9071681462576.9351175-CDS-Ecto-sp13_S_contig11111:809..907Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11111 810..907 -
1681462576.945824-CDS-Ecto-sp13_S_contig11111:1107..13661681462576.945824-CDS-Ecto-sp13_S_contig11111:1107..1366Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11111 1108..1366 -
1681462576.954477-CDS-Ecto-sp13_S_contig11111:2157..22811681462576.954477-CDS-Ecto-sp13_S_contig11111:2157..2281Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11111 2158..2281 -
1681462576.9652934-CDS-Ecto-sp13_S_contig11111:2800..29521681462576.9652934-CDS-Ecto-sp13_S_contig11111:2800..2952Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11111 2801..2952 -
1681462576.9735758-CDS-Ecto-sp13_S_contig11111:3737..38751681462576.9735758-CDS-Ecto-sp13_S_contig11111:3737..3875Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11111 3738..3875 -
1681462576.9823956-CDS-Ecto-sp13_S_contig11111:4430..45751681462576.9823956-CDS-Ecto-sp13_S_contig11111:4430..4575Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11111 4431..4575 -
1681462576.9978707-CDS-Ecto-sp13_S_contig11111:4978..51241681462576.9978707-CDS-Ecto-sp13_S_contig11111:4978..5124Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11111 4979..5124 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11111.972.1

>prot_Ecto-sp13_S_contig11111.972.1 ID=prot_Ecto-sp13_S_contig11111.972.1|Name=mRNA_Ecto-sp13_S_contig11111.972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=354bp
YTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVMY
DNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEING
KKAEVGASLFVTTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSG
IVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAVDVDGDGMEMRYEWYKD
GFGDLLMMALPHHMDTMDAGADIGVVMADSYQCIKGPMTGIVGSVWTMRD
NLTDIAWTARTPLQEAALSIDDPLLSLSWERRMRDALAADLNSVLPSAPD
VYSFGKEISRMARLALVADELGDIPAREAALTTMGVYLTPWMKNDNEVRG
LHD*
back to top

mRNA from alignment at Ecto-sp13_S_contig11111:810..5124-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11111.972.1 ID=mRNA_Ecto-sp13_S_contig11111.972.1|Name=mRNA_Ecto-sp13_S_contig11111.972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11111:810..5124- (Ectocarpus species13 EcNAP12_S_4_19m)
TACACGATCAAGTCGTCGGACGCAGGAGTCGGCGTCTCATACTCGGCGAT GCGGCGGGTGGAGTCCCTGGAGCGCGTGGCGGACGCCTACGCCGCAGACC TCAGCGTGTCCGCAAAGGAAGGGGTGACCGGTCGACACATCGTCATGTGA GTTTTTAGTCGTGGTAGCAATGGTGGGGTCCATGTTTGTTTTTTTGCTTC GCTTCTTCCGAGGGTGTATAGCTGAGTAGTCTCTCGTTAGAAACTAGTGG GCTGTGCTTCTTTAAGATATGAGCACGAGCTACTATTGTACTTGCAGAGA ATAACCGCTGGGCGTACTCCCTGCCGGCTGATGGGCCGGTTGCGCGCCTT TTTATTTTCTTGCTTCCAGCAATACATCACAAAAACCGGCTCGAGAGCGT GTGGCACACTGCTGTATTTGTCGACCCAGCTTGTGTTGATCTCTGTTCAA TTGCGTACACACCGGGCCGGCTAGCCTCGTCAATTCCCACCTGGCGTCTA TACACACACACGCACACCTTCGTTTTTTTTCGCGTTTGGGTAAAGCCAGG TACGATAATCTTACGGTGACTCTCCAGCACGACGCGGCCAACGAGGGTAA CTTCCGCACGCTGCTTGCGCGCGGCTCGCCGTACATGACGTTCGAGTTCG CCGGGGCCACCCCTCGGATAAAAGCCAACGGAGACATCCTCGAGGTGTGT GGTGGCGTGGATTGGATTGGCGTCATGTGCCGCGATATCGTGCATGCACG TCGTAGTTTGGTGGAATGTACCATGCGATACACATGCGGTGTTACGCGCG TGGTGCCGTGTGCGAGTTGATGCGGTGTGATGTGGTGTAACGCTTTTGCT TGTGATTGTGGCGTGGGTAACAGAACCGACGAGACATGAATGTGTATCTG TTGTTGTGTTGTTTTATACCGAACGTCACAGTTTGCCGCAAACCGAATCA AGGGGTCCAACAGAAAGTGGTGGTGTTCCTTTGCCGACTTTTATCACCAC CCCAATACCCAATATAGGTCTATCTTCCGCCTGCCCCCCCCACCTCCCTC GCCACCAAGTTGCTCCGCATGCCCAGAGCTTGCGGGAAAAACACTTAGCG TTAACGAATTGGCTGGGAACAGAAACGATATCTCGTTCAAGCTGAAACCA TAGTCGCAAGACAGAGGCAAAAAACAAACCGCTGTCCCACTCCCGCCCTC CCCTCTCCATGCTAAATTACCTCCTCCACCTCCCTGCAACCCGTCCAAGA TCAACGGAAAGAAGGCTGAGGTGGGCGCTTCCTTGTTCGTGACGACTTTC AAGCTGGCGCTCAGCAACTGGGAGACGTGGGTGGTCTTTACTTCGGAGTC TGTGACGTGGAAGGTTACTTCGTTGCAGGAAGTCGAGGTGCGGAAGGGGG TGCAGTTTTTTGGGGTGGGATGCGGAATTTGATGTGATGATAAGATGGAA TGTGGACCTTGTTTGGTTTGATTGGTCGTTGGCAGCGGGTGCGAGGGATA CAGTAACGCGGTTTATGTGTGTTTGTGCGTCTTGTAGTAGCATTGACCCC GTTTACCGGCTGACCCATGCAAAAATCACCAGTCTTTTGTGTGTGCGCAT CTTGTATCGTGTAGTTTATGTTGGCGGACTTAGCTCGTAAAATGTCAGGA CACGGTGGGTTAGGTGGGTGTAGGGTGTGAAGGGTGCGGGCCTGAAGCGA CGGTTGTTTCGCACGCCCATCCACGGGGTGCCTGGGCGTTTGCGTTCGGC CCTCCCGCGCCTAGGCATAGTCGTCTTCGTCGCCGTCTCCTCGTTCTTCC CCCCTTGTTCCTGCCGGGCCGCCGTCGCTTGGAAAAGTCTCTCTTGATCC AGCTACATCGCCGCCGCCACCAGCCGCCGCCGTTCCCACCCGCCTCCGGT ACTGTTGTCGGGTCGATTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCGCCTTCCTCCTTCCCCCTGCTCCGCCCCCCCGCCCNNNNNNNNNNC TCACGTCTACGCCCCCCGCCACCACCCCCCCCCCATCCCTCCCCCCCCCG GTTTTGTTGGTGGGTGTTTTGCCCCCCCCCCCCCCCCCGCCCTCGGTTAA CCCTTCTGTTTTCCTCTCTCCGGTTTGCTTGCCCGGCCGGCCGCGGCAAC ACGGCGCAAACCACGGCGGCAGATGAAGGCCCCCTTCTCGGGCATCGTGC GCGTGGCGGTTCTGCCGCACCCGTGGGACTCGGAGGGCGAGATGACCCTG TCGGAGCACGCCTACGCCTACCCCAGGGGGGGGCGTGTGGCGGTCGACGT CGACGGGGACGGGATGGAGATGAGGTGAGCGAGAGCGCGGCGACCACCGA CCGGGCGGTGTATTGTGTGCAGTGAGAGGCGCAAGCTGAGGAGGTTGCCC CGCTGTTTTTTTGGCCCGCGAAGATGGACATCAACGCGAGGCACACGGCC GCAGAATCAGATGTTTGTTCCGTGCGGTCTATGATAGGATAGGGTGCACG TCTTGTTTAGATACATGAGTGGTGGGTGGCTGTACGCCAATCGGAAGTTC GTGGAACGTTGGGCGGTAGGGCACAAGGTACGTACGCTGGAGGGTGGCTC TGTGCTCGTTGAATTGAGGCCAGGCCGACGTTCTGTCGTGAAAGTGGCTG GACAGCAGATGCCGCCGAAAAAGGGAGGAGGTCCGAAGGCCCCAGGCGCG TTCACAGGAGGCAATAGTCCAGAACGAGACAGAAAGTAAACACGAAAGCG ATTGACTATCTGGTGTTTACCCGAGTCTTCGTGGGTCACACATCCTGCCG CGTGCGATTCATGTCGGGGTTTTGCTGCTGTGGGGTGGTCCAGGTACGAG TGGTATAAGGACGGCTTCGGCGACCTTCTGATGATGGCGCTGCCCCACCA CATGGACACCATGGACGCAGGGGCAGACATTGGGGTCGTCATGGCGGACA GCTACCAGTGCATCAAGGTCAGACCAGCAAGAAATCGGCAGAAGAAACGT GCACACAATCAGGCGGGGGTTGCGACGTTTCTGCCCCGGGTGGTTTGAGT CGCGACCAACGGTAGGAAGGGGTGCGGCCCTGGCGGTTGGTTGGCAGCGG CACCGATGTGCCGCCTCGTTAGGAATGACTAATTATGGGGTTTTGGGCGA GCGCGACCCAAGGCCCATCAGCAGAGAAGGTACGCACAACTGCGGCAGAT TGTTTTGGGACATCACGATACGATATTTTAGAAAAAGAGGTGTGCGATGG TTGTGTTTGTTTGTCGAGGTTTCATTTTGTGTCCGGACGTGGGGAGGGGA GGGAGGGTAGGGCCGTCGTCCAGGAAGACGGCTGGGTTCCGGGGCGCACC GGGTTTAAGGGCATGGGTTGAAGAGTTTTGTGGCTACGCAGGTTCTTTCG ACGGCACGAAAGAGACTGGTCTGCTATAACCACGATGACGACGACGTCGT CGACGACGACGAGCTTGCTACCGACTGATCAAAACGAGGCTGCTTCAATA ACTCTTGCACACGCACGCGCGCAACTTGCTGTTAGTCTTTCGGAGGACTA AAACATTAAGGCCGGCAAAATATCCCAACAATTGGCCTCCTACGTACCAT AATTACAGTTTCAAAGGCACAGGGAGTAATACTGGCGTTATGCTAGTGCT CTTGTCACAAACCCGACAATTGGCGTACGTACCATAAACGCCATTCTAAG GCACCGCAGGGAGCAATACTCTTGTTGGCATGGCGTTATGCTGGCCCCCT TTTCACAGGGCCCCATGACCGGGATCGTGGGGAGCGTCTGGACCATGCGG GACAACCTCACGGACATCGCCTGGACCGCTAGAACTCCGCTCCAGGAGGC CGCGCTGTCGATCGACGACCCCCTCCTGTCCCTGTCGTGGGAGAGGCGGA TGCGCGACGCCCTCGCCGCCGATCTCAACTCGGTGCTGCCGTCGGCGCCG GACGTGTACTCCTTCGGGAAGGAGATCTCAAGGATGGCGAGGCTCGCGCT TGTCGCCGACGAGCTTGGTGAGTGTCGGTTGTTCTTGCTGCTGTGGTTGT TAGTGGTCGTGACGGGGATGGTGGCGGCGGTGAAAGTGTTGCTACTTGCC CTGTTGCTTGGTGATCGACCCAATCCCCTCCATTGCCCGTTCTTTCGTTT GTTTGCTCTCTTGGCGCTGTGCTGTTGATTTCCGCTTTTCGTTTTTGTGT TTCGTTTCGCGGGGAAGGCGACATTCCTGCGCGAGAGGCCGCTCTGACCA CGATGGGGGTCTACCTGACCCCCTGGATGAAGAACGACAACGAGGTGAGA GGTCTACATGACTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11111:810..5124-

>mRNA_Ecto-sp13_S_contig11111.972.1 ID=mRNA_Ecto-sp13_S_contig11111.972.1|Name=mRNA_Ecto-sp13_S_contig11111.972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1062bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11111:810..5124- (Ectocarpus species13 EcNAP12_S_4_19m)
TACACGATCAAGTCGTCGGACGCAGGAGTCGGCGTCTCATACTCGGCGAT
GCGGCGGGTGGAGTCCCTGGAGCGCGTGGCGGACGCCTACGCCGCAGACC
TCAGCGTGTCCGCAAAGGAAGGGGTGACCGGTCGACACATCGTCATGTAC
GATAATCTTACGGTGACTCTCCAGCACGACGCGGCCAACGAGGGTAACTT
CCGCACGCTGCTTGCGCGCGGCTCGCCGTACATGACGTTCGAGTTCGCCG
GGGCCACCCCTCGGATAAAAGCCAACGGAGACATCCTCGAGATCAACGGA
AAGAAGGCTGAGGTGGGCGCTTCCTTGTTCGTGACGACTTTCAAGCTGGC
GCTCAGCAACTGGGAGACGTGGGTGGTCTTTACTTCGGAGTCTGTGACGT
GGAAGGTTACTTCGTTGCAGGAAGTCGAGATGAAGGCCCCCTTCTCGGGC
ATCGTGCGCGTGGCGGTTCTGCCGCACCCGTGGGACTCGGAGGGCGAGAT
GACCCTGTCGGAGCACGCCTACGCCTACCCCAGGGGGGGGCGTGTGGCGG
TCGACGTCGACGGGGACGGGATGGAGATGAGGTACGAGTGGTATAAGGAC
GGCTTCGGCGACCTTCTGATGATGGCGCTGCCCCACCACATGGACACCAT
GGACGCAGGGGCAGACATTGGGGTCGTCATGGCGGACAGCTACCAGTGCA
TCAAGGGCCCCATGACCGGGATCGTGGGGAGCGTCTGGACCATGCGGGAC
AACCTCACGGACATCGCCTGGACCGCTAGAACTCCGCTCCAGGAGGCCGC
GCTGTCGATCGACGACCCCCTCCTGTCCCTGTCGTGGGAGAGGCGGATGC
GCGACGCCCTCGCCGCCGATCTCAACTCGGTGCTGCCGTCGGCGCCGGAC
GTGTACTCCTTCGGGAAGGAGATCTCAAGGATGGCGAGGCTCGCGCTTGT
CGCCGACGAGCTTGGCGACATTCCTGCGCGAGAGGCCGCTCTGACCACGA
TGGGGGTCTACCTGACCCCCTGGATGAAGAACGACAACGAGGTGAGAGGT
CTACATGACTGA
back to top