mRNA_Ecto-sp13_S_contig11109.969.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: D8LTY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY5_ECTSI) HSP 1 Score: 782 bits (2020), Expect = 6.000e-279 Identity = 446/511 (87.28%), Postives = 462/511 (90.41%), Query Frame = 1
Query: 1 HWTLGEPVAVTFALENEAGVRVQHPHSHHVWAEPQPSSPSARDGPATGAVPLRVTLEGERASRFLLDVSSSIEEGDGVGGGGSRGEAGGGAAKDADKSYADQGNHCAPFKGLTLDLSTGTAHGWVTVLPASRPTEPRTPPDLDHEDSTPVCACPAVAAQXXXXXXXXXXXXXXXXEENGCKPQGGNGVVAEAEVQLSISLSPAWVRRFNRPVLPLESLPALVHSPAYHVAAVGATPTVTTPTPPTGRLEGEGQRRAVIGRRGACNVRRLRFEVVVARGGGDRDTGRRTVGEQEKREENSSGSKFTANEAEGATVEDSHLAEAPGRKHQGDCCGGPRNTSLPSPPXXXXXXASSWPSLSSSPVGNAAAISGSEGDGATSGLSSCSARSGXXXXXXXXXXXXXXXDKHGNEIVEVCAAESASLGGFFGTVWDCALKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNTCPGSLNVEACEYDWGSP 1533
HWTLGEPVAVT ALE+EAGVRVQHPHS+HVWAEPQPSS SARDG ATGAVPLRVTLEGERASRFLLDVSSSIEEGDGVGGGG A + D S+ADQG CAPFKGLTLDLSTGTAHGWV VLP+SRPTEPRTPPDLDHEDSTPVCACPAVAAQXXXXXXXXXXXXXXX EENGCKP+G GVVA AEVQLSISLSPAW RRFNRPVLPLESLPALVHSP YHVAAVGATPTV TPTPPTGRLEGEGQ+RAVIGR GACNVRRLRFEV VARGGGDRDTGRRT+ E+EKREENS GSKFTANEAEGATVEDSHLA AP RKH+GDCCGGP N SLP PP ASSWPSLSSSPVGNAA +SGS+GDGATSGLSSC XXXXXXXXXXXXXXX + GN I+EVCAAESASLGGFFGTVWDC+LKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARN+CPGSLNVEACEYDWGSP
Sbjct: 36 HWTLGEPVAVTVALESEAGVRVQHPHSYHVWAEPQPSSSSARDGLATGAVPLRVTLEGERASRFLLDVSSSIEEGDGVGGGG--------ADRHDDSSHADQGRQCAPFKGLTLDLSTGTAHGWVAVLPSSRPTEPRTPPDLDHEDSTPVCACPAVAAQXXXXXXXXXXXXXXXGEENGCKPEGEEGVVAGAEVQLSISLSPAWARRFNRPVLPLESLPALVHSPPYHVAAVGATPTVATPTPPTGRLEGEGQKRAVIGRSGACNVRRLRFEVGVARGGGDRDTGRRTIREEEKREENS-GSKFTANEAEGATVEDSHLAGAPARKHKGDCCGGPINISLPPPPSPPTTPASSWPSLSSSPVGNAATVSGSDGDGATSGLSSC-----XXXXXXXXXXXXXXXXERGNGIIEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNSCPGSLNVEACEYDWGSP 532
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A6H5JS56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS56_9PHAE) HSP 1 Score: 726 bits (1873), Expect = 3.710e-257 Identity = 421/498 (84.54%), Postives = 440/498 (88.35%), Query Frame = 1
Query: 58 VRVQHPHSHHVWAEPQPSSPSARDGPATGAVPLRVTLEGERASRFLLDVSSSIEEGDGVGGGGSRGEAGGGAAKDADKSYADQGNHCAPFKGLTLDLSTGTAHGWVTVLPASRPTEPRTPPDLDHEDSTPVCACPAVAAQXXXXXXXXXXXXXXXXEENGCKPQGGNGVVAEAEVQLSISLSPAWVRRFNRPVLPLESLPALVHSPAYHVAAVGATPTVTTPTPPTGRLEGEGQRRAVIGRRGACNVRRLRFEVVVARGGGDRDTGRRTVGEQEKREENSSGSKFTANEAEGATVEDSHLAEAPGRKHQGDCCGGPRNTSLPSPPXXXXXXASSWPSLSSSPVGNAAAISGSEGDGATSGLSSCSARSGXXXXXXXXXXXXXXX------DKHGNEIVEVCAAESASLGGFFGTVWDCALKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNTCPGSLNVEACEYDWGSP 1533
+ + HPHSHHVWAEP+PSS SA DG A G VPLRVTLEGERA+RFLLDVSSSIEEG+ VG GGS GEAGGGA + D S+ADQG CAP KGLTLDLSTG AHGWV VLPASRPTEPRTPPDLDH+DSTPVCACPAVAA XXXXXXXXXXXXXXX EENGC+P+G +GVVA AEVQLSISLSPAWVRRFNRPVLPLESLPA VH PAYHVAAVGATPTV TPTPPTGRLEGEGQRRAVIGRR ACNVRRLRFEV VARGGGDRDTGRRT GE+E+REE S GSKFT NEAEGATVEDSHLAEAP RKH+G C GPRNTSLP PP A S PSLSSSPVGNA A+SGSE DGAT GLSSCSA XXXXXXXXXXXXXXX DKHGN+IVEVCAAESASLGGFFGTVWDC+LKMGAFLAALGP SLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARN+CPGS+NVEACEYDWGSP
Sbjct: 1 MNIPHPHSHHVWAEPEPSSSSAHDGLAAGVVPLRVTLEGERANRFLLDVSSSIEEGECVGAGGSCGEAGGGADRHVDSSHADQGRQCAPSKGLTLDLSTGMAHGWVAVLPASRPTEPRTPPDLDHDDSTPVCACPAVAAXXXXXXXXXXXXXXXXGEENGCEPEGEDGVVAGAEVQLSISLSPAWVRRFNRPVLPLESLPAFVHDPAYHVAAVGATPTVATPTPPTGRLEGEGQRRAVIGRRDACNVRRLRFEVGVARGGGDRDTGRRTPGEEERREEKS-GSKFTPNEAEGATVEDSHLAEAPSRKHKGGYCRGPRNTSLPPPPSPPATPAWSRPSLSSSPVGNAPAMSGSEWDGATGGLSSCSAXXXXXXXXXXXXXXXXXXXXXXNDDKHGNKIVEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPGSLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNSCPGSVNVEACEYDWGSP 497
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A812H2D9_9DINO (EEF1AKMT3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812H2D9_9DINO) HSP 1 Score: 63.5 bits (153), Expect = 2.400e-7 Identity = 42/85 (49.41%), Postives = 47/85 (55.29%), Query Frame = 1
Query: 1282 VWDCALKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNT---CPGSLNVEACEYDWG 1527
VW A M A L A P + GKRVVELGA TG + +CAALGASEVV TD LPLL N+ N C G + E WG
Sbjct: 129 VWPSAHSMCAHLCAH-PELVRGKRVVELGAGTGLVGLVCAALGASEVVLTDLSQGLPLLKRNVQLNLGALCDGGHSTSVAELKWG 212
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A813AV35_9DINO (METTL21A protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813AV35_9DINO) HSP 1 Score: 63.5 bits (153), Expect = 5.630e-7 Identity = 42/85 (49.41%), Postives = 47/85 (55.29%), Query Frame = 1
Query: 1282 VWDCALKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNT---CPGSLNVEACEYDWG 1527
VW A M A L A P + GKRVVELGA TG + +CAALGASEVV TD LPLL N+ N C G + E WG
Sbjct: 199 VWPSAHSMCAHLCAH-PELVRGKRVVELGAGTGLVGLVCAALGASEVVLTDLSQGLPLLKRNVQLNLGALCDGGHSTSVAELKWG 282
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A813AXC0_SYMMI (METTL21A protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813AXC0_SYMMI) HSP 1 Score: 63.5 bits (153), Expect = 7.470e-7 Identity = 42/85 (49.41%), Postives = 47/85 (55.29%), Query Frame = 1
Query: 1282 VWDCALKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNT---CPGSLNVEACEYDWG 1527
VW A M A L A P + GKRVVELGA TG + +CAALGASEVV TD LPLL N+ N C G + E WG
Sbjct: 180 VWPSAHSMCAHLCAH-PELVRGKRVVELGAGTGLVGLVCAALGASEVVLTDLSQGLPLLKRNVQLNLGALCDGGHSTSVAELKWG 263
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A835YRK7_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK7_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.180e-6 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 1234 EVCAAESASLGGFFGTVWDCALKMGAFL----AALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNT--CPGSLNVEACEYDWGSP 1533
E+C A+ G +VWD ++ + +L +++GKRV+ELGA G CA LGA +V TD + +LP+L N RN P S+ + EY WG+P
Sbjct: 21 EICIAQQPGSGNLGTSVWDASVILVHYLNDNSKQFNQRTMDGKRVLELGAGCGLAGIYCATLGA-DVTLTDLEPVLPILNQNARRNLGGMPESVKYKVQEYCWGNP 125
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A7S1A114_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A114_NOCSC) HSP 1 Score: 58.2 bits (139), Expect = 3.260e-6 Identity = 37/82 (45.12%), Postives = 44/82 (53.66%), Query Frame = 1
Query: 1282 VWDCALKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNTCPGSLNVEACEYDWG 1527
VW A + A L A P + G+ VVELGA TG + + AALGA VV TD LPLL N+ARN+ V E WG
Sbjct: 5 VWPSAHSLSAHLCA-NPNLVRGRNVVELGAGTGLVGFVAAALGAKRVVLTDLPSALPLLRRNIARNSVACGNAVSVAELRWG 85
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A812NMJ9_9DINO (NIP4-2 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812NMJ9_9DINO) HSP 1 Score: 59.7 bits (143), Expect = 1.150e-5 Identity = 41/85 (48.24%), Postives = 45/85 (52.94%), Query Frame = 1
Query: 1282 VWDCALKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNTCP---GSLNVEACEYDWG 1527
VW A M A L A P + GKRVVELGA TG + +CAALGASEVV TD LPLL N+ N G E WG
Sbjct: 857 VWPSAHSMCAHLCAH-PELVRGKRVVELGAGTGLVGLVCAALGASEVVLTDLSQGLPLLKRNVQLNLAALGDGGHTTSVAELKWG 940
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A813I7L0_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I7L0_POLGL) HSP 1 Score: 57.0 bits (136), Expect = 2.750e-5 Identity = 37/82 (45.12%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1282 VWDCALKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNTCPGSLNVEACEYDWG 1527
VW A + A L A P + GKRV+ELGA TG + + AALGA EVV TD LPLL N+ RN + + E WG
Sbjct: 103 VWPSAHSLCAHLCAC-PELVRGKRVLELGAGTGLVGLVAAALGAKEVVLTDLASGLPLLRRNVERNKAGCLIEPKVTELRWG 183
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Match: A0A6J1FT98_CUCMO (protein-lysine methyltransferase METTL21D n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1FT98_CUCMO) HSP 1 Score: 56.6 bits (135), Expect = 3.990e-5 Identity = 41/98 (41.84%), Postives = 53/98 (54.08%), Query Frame = 1
Query: 1279 TVWDCALKMGAFL------AALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNTCP-GSLN-------VEACEYDWGS 1530
TVWD +L FL P+ L+GKRVVELGA G A LG +VVATD K++LP+L+ N+ RNT +N + A E DWG+
Sbjct: 37 TVWDASLVFVKFLERNCRKGKFSPSKLKGKRVVELGAGCGLAGFGMALLGC-DVVATDQKEVLPILSRNIERNTPSLAQMNPSDSFGSIRAAELDWGN 133 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11109.969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11109.969.1 >prot_Ecto-sp13_S_contig11109.969.1 ID=prot_Ecto-sp13_S_contig11109.969.1|Name=mRNA_Ecto-sp13_S_contig11109.969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=511bp HWTLGEPVAVTFALENEAGVRVQHPHSHHVWAEPQPSSPSARDGPATGAVback to top mRNA from alignment at Ecto-sp13_S_contig11109:1..3141- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11109.969.1 ID=mRNA_Ecto-sp13_S_contig11109.969.1|Name=mRNA_Ecto-sp13_S_contig11109.969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3141bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11109:1..3141- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11109:1..3141- >mRNA_Ecto-sp13_S_contig11109.969.1 ID=mRNA_Ecto-sp13_S_contig11109.969.1|Name=mRNA_Ecto-sp13_S_contig11109.969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1533bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11109:1..3141- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |