mRNA_Ecto-sp13_S_contig11093.953.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: A0A6H5LDL0_9PHAE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDL0_9PHAE) HSP 1 Score: 398 bits (1023), Expect = 3.670e-129 Identity = 290/311 (93.25%), Postives = 296/311 (95.18%), Query Frame = 3
Query: 1065 GNPDEAWKRKLRDEDEQLKELDLDSLMVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSDEDAGPIEITKQASQDGGELVVAAATGGDEDEARNGVAAVPGXXQADGNGNNGTAKKGNGMATGMSSSELRAQQGKEDRPVFDMFSAAALPATAGGPGGKMGGKGGGAHGMSFLGEDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRAGPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLN 1997
GNP+E WKRKL+DEDEQLK+LDLDSLMVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SDSDEDAGPIEITKQASQ GGELV AAATG DEDEARNG AAVP QADGNG++ AKKGNGMATG+SSSELRAQQGKEDRPVFDMFSAAALPATAGGPGGKMGGKGGGAHGMSFLGEDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRAGPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLN
Sbjct: 149 GNPEEMWKRKLQDEDEQLKDLDLDSLMVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQGDASDSDEDAGPIEITKQASQHGGELVAAAATGSDEDEARNGAAAVPSGGQADGNGSSTAAKKGNGMATGISSSELRAQQGKEDRPVFDMFSAAALPATAGGPGGKMGGKGGGAHGMSFLGEDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRAGPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLN 459
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: D8LRH2_ECTSI (U4/U6-associated splicing factor PRP4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH2_ECTSI) HSP 1 Score: 324 bits (831), Expect = 1.330e-100 Identity = 274/329 (83.28%), Postives = 278/329 (84.50%), Query Frame = 3
Query: 936 RKGSGRSXXDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNPDEAWKRKLRDEDEQLKELDLDSLMVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SDSDEDAGPIEITKQASQDGGELVVAAATGGDEDEARNGVAAVPGXXQADGNGNNGTAKKGNGMATGMSSSELRAQQGKEDRPVFDMFSAAALPATAGGPGGKMGGKGGGAHGMSFLGEDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRAG-----PAAVGGGS 1895
RKGSGRS DD XXXXXXXXXXXXXXXXXXXX GNPDE WKRKLRDEDEQLKELDLDSLMVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX SDSDEDAGPIEITKQASQDGGELV AAATGGDEDEARNG AAVPGX QAD NG+N A KGNG+ATGMSSSELRAQQGKEDRPVFDMFSAAALPATAGGPGGKMGGKGGGAHGMSFLGEDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTR P + GG+
Sbjct: 103 RKGSGRSRRDDDGDRRDGXXXXXXXXXXXXXXXXXXXXDRGSGGNPDEMWKRKLRDEDEQLKELDLDSLMVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPQSQDNTADGDLAXXXXXXXXXXXXSDSDEDAGPIEITKQASQDGGELVAAAATGGDEDEARNGAAAVPGXGQADANGSNAAANKGNGVATGMSSSELRAQQGKEDRPVFDMFSAAALPATAGGPGGKMGGKGGGAHGMSFLGEDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRVALCTTFPMCIIGGA 431
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: A0A7S2D2M3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D2M3_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.370e-25 Identity = 63/100 (63.00%), Postives = 71/100 (71.00%), Query Frame = 3
Query: 1716 EDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRAGPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLNKKHCIR 2015
ED DQ N+TD EGYY TRVGE+I GRY V G +G GVFSTVL C D R VA+KMIRNND MRKAAQKEV LL+EL ++DP NKKHC+R
Sbjct: 30 EDHSHDQSNYTDGEGYYNTRVGEIIEGRYQVRGKIGAGVFSTVLSCFDNRL------DNKPVAIKMIRNNDVMRKAAQKEVELLQELTKNDPENKKHCVR 123
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: A0A812Q5N5_SYMMI (Prpf4b protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Q5N5_SYMMI) HSP 1 Score: 118 bits (295), Expect = 7.480e-25 Identity = 70/138 (50.72%), Postives = 94/138 (68.12%), Query Frame = 3
Query: 1611 VFDMFSAA---ALPATAGGPGGKMGGKGGGAHGMSFLGEDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRAGPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLNKKHCIR 2015
FDMFSA+ ALP G G + GG+ A M G+D + NW D EGYYKTR+GEVIGGRY V+G VG+GVFSTVL+C+D++ +V LK+IRNND MRKA++KE++LL+ +++ DP +KHC+R
Sbjct: 23 AFDMFSASPTGALPHN--GAGDRAGGR---AKSMVVEGDDPLLES-NWDDYEGYYKTRIGEVIGGRYQVMGEVGKGVFSTVLRCIDSKR------HDEQVVLKVIRNNDMMRKASEKELSLLRMISDADPEGRKHCVR 148
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: K8YZQ6_NANGC (Protein kinase domain-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YZQ6_NANGC) HSP 1 Score: 117 bits (294), Expect = 1.390e-24 Identity = 62/96 (64.58%), Postives = 72/96 (75.00%), Query Frame = 3
Query: 1740 NWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRA----GPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLNKKHCIR 2015
NW D EGYYKT VGEVIG RY VLGS+G+GVFSTVL+C D RA G A S VA+K+IRNND MRKAAQ+E+ LL+ +A DP NKKHC+R
Sbjct: 70 NWDDHEGYYKTLVGEVIGDRYLVLGSIGRGVFSTVLRCQDQRALQEGGEAGDKAPSVVAVKVIRNNDVMRKAAQRELELLRVIAAADPENKKHCVR 165
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: A0A4D9DES0_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DES0_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.120e-23 Identity = 62/96 (64.58%), Postives = 72/96 (75.00%), Query Frame = 3
Query: 1740 NWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRA----GPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLNKKHCIR 2015
NW D EGYYKT VGEVIG RY VLGS+G+GVFSTVL+C D RA G A S VA+K+IRNND MRKAAQ+E+ LL+ +A DP NKKHC+R
Sbjct: 360 NWDDHEGYYKTLVGEVIGDRYLVLGSIGRGVFSTVLRCQDQRASQEGGEAGKKMPSVVAVKVIRNNDVMRKAAQRELELLRVIAVADPENKKHCVR 455
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: A0A7S3H7F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7F5_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.070e-22 Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 3
Query: 1734 QGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLD----------------TRAGPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLNKKHCIR 2015
Q NW D EGYYK R+GE +G R+ +LG VG+GVFSTVLKC+D T A A + VA+KMIRNNDTMRKAA+KE ++L +A+ DP N K+C+R
Sbjct: 16 QSNWDDGEGYYKARIGECVGDRFRILGVVGKGVFSTVLKCVDLYSPATTNSNNTSNGATTAPATATESAAHVAIKMIRNNDTMRKAAEKEKSILLSIAQADPHNTKYCVR 125
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: A0A7S2RWC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWC8_9STRA) HSP 1 Score: 111 bits (278), Expect = 5.420e-22 Identity = 55/93 (59.14%), Postives = 69/93 (74.19%), Query Frame = 3
Query: 1734 QGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRAGPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLNKKHCI 2012
Q NW D EGYY+TR+GE+I GRY V G++G+G+FSTVL C+D RA VA+KMIRNND MRKAA KE+ +L+E+A DP NK+HCI
Sbjct: 244 QSNWDDGEGYYRTRIGELITGRYQVRGALGKGIFSTVLSCMDLRA------ENRPVAIKMIRNNDVMRKAAAKEMEILQEIASKDPENKRHCI 330
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: D0NMI4_PHYIT (Non-specific serine/threonine protein kinase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMI4_PHYIT) HSP 1 Score: 110 bits (274), Expect = 2.300e-21 Identity = 70/139 (50.36%), Postives = 85/139 (61.15%), Query Frame = 3
Query: 1614 FDMFSAAALPATAGGPGGKMGGKGGGAHGMSFLGEDGGGDQGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKC-----LDTRAGPAAVGGGSEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLNKKHCIR 2015
FDMFS AAL G G ++ + D Q N D EGYY T +GEV+ G+Y VLG+VG+GVFSTVL+C L+T +G G S VA+K+IRNND MR AAQ E+ LLKEL E DP +KKHCIR
Sbjct: 293 FDMFSMAALDDHNDAMNGSTG--------VAAVTVDEVALQSNCDDAEGYYSTTIGEVLNGKYRVLGAVGKGVFSTVLRCQCVTPLETESG----GSLSVVAVKLIRNNDVMRDAAQTELKLLKELGERDPRDKKHCIR 419
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Match: A0A329S2W8_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S2W8_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.210e-20 Identity = 58/95 (61.05%), Postives = 68/95 (71.58%), Query Frame = 3
Query: 1734 QGNWTDVEGYYKTRVGEVIGGRYTVLGSVGQGVFSTVLKCLDTRAGPAAVGGG-SEVALKMIRNNDTMRKAAQKEVALLKELAEHDPLNKKHCIR 2015
Q N D EGYY T +GEV+ G+Y VLG+VG+GVFSTVL+C A GG S VA+K+IRNND MR AAQ E+ LLKEL E DP +KKHCIR
Sbjct: 176 QSNCDDSEGYYSTTIGEVLNGKYRVLGAVGKGVFSTVLRCHCITPLEADSGGSLSVVAVKLIRNNDVMRDAAQTELKLLKELGERDPRDKKHCIR 270 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11093.953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11093.953.1 >prot_Ecto-sp13_S_contig11093.953.1 ID=prot_Ecto-sp13_S_contig11093.953.1|Name=mRNA_Ecto-sp13_S_contig11093.953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=461bp MSRSSRRSRSRSESRERGSSSTTSKKKKSDKDKKKSSSSSSSARNGGGGAback to top mRNA from alignment at Ecto-sp13_S_contig11093:273..4869+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11093.953.1 ID=mRNA_Ecto-sp13_S_contig11093.953.1|Name=mRNA_Ecto-sp13_S_contig11093.953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11093:273..4869+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11093:273..4869+ >mRNA_Ecto-sp13_S_contig11093.953.1 ID=mRNA_Ecto-sp13_S_contig11093.953.1|Name=mRNA_Ecto-sp13_S_contig11093.953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1383bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11093:273..4869+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |