mRNA_Ecto-sp13_S_contig11087.949.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11087.949.1
Unique NamemRNA_Ecto-sp13_S_contig11087.949.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: D7FKF9_ECTSI (MI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF9_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 3.380e-160
Identity = 251/262 (95.80%), Postives = 251/262 (95.80%), Query Frame = 1
Query:  103 MQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDEK 888
            MQKDAETMGKATKEYQRIAWEALRKSINGLINK           VNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDEK
Sbjct:    1 MQKDAETMGKATKEYQRIAWEALRKSINGLINK-----------VNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDEK 251          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: A0A7S3XKB6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKB6_HETAK)

HSP 1 Score: 415 bits (1067), Expect = 1.140e-143
Identity = 212/275 (77.09%), Postives = 240/275 (87.27%), Query Frame = 1
Query:   58 GRTGGVYIPPFKLAQMQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMD 882
            GRTGGVY+PPFKLA M++     GK TKE+QR++WEALRKSINGLINK           VN  NIK + PEL Q NLVRGRGLFARA+MKAQLASPGFT ++AALVAV+NT+LPENGEL+LKRVI AFRRAYKRRDKV ATAL++FIAH+VNQQVAHELLALQLLTVLLEEPTDDSVEIAV F KE+GQ+L+ELSPQGLHA+FERFRGILHEG IDKRVQYTIE LFA+RK+GF DHPAVPPELDLVER +QITFE+GL+D L++EEMLD+FR D
Sbjct:    1 GRTGGVYVPPFKLAMMREQMAKQGKHTKEFQRMSWEALRKSINGLINK-----------VNVGNIKNLVPELLQENLVRGRGLFARALMKAQLASPGFTHIYAALVAVINTRLPENGELLLKRVIFAFRRAYKRRDKVTATALSRFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVAFVKEVGQLLEELSPQGLHAIFERFRGILHEGDIDKRVQYTIEGLFAVRKAGFEDHPAVPPELDLVERSEQITFELGLDDDLQREEMLDVFRFD 264          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: A0A835ZAM0_9STRA (MI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAM0_9STRA)

HSP 1 Score: 432 bits (1110), Expect = 4.910e-142
Identity = 225/295 (76.27%), Postives = 256/295 (86.78%), Query Frame = 1
Query:   10 AEP--KVNVLVDQPATVTGRTGGVYIPPFKLAQMQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDEK 888
            AEP  K N++  Q   +TGR GGVYIPPFKLAQM+K+ + + K+++EYQR AWEALRKSINGLINK           VN  N+K I PELF+LNLVRGRGLFARA+MK+QLASPGFTPVFAA+VAVVNTKLPENGELILKRVIVAFRRA+KRRDK+VATALAKFIAH+VNQQVAHELLALQLLTVLLE PTDDSVEIAV FT+EIGQ+L E+SPQGLHAVFERFRGIL EG IDKRVQYT+E LFA RK GF+D PAVP ELDLVER+DQITFE+GL+D+L K+E+LD+FRMD+K
Sbjct:   99 AEPAAKPNIMTGQAEAMTGRLGGVYIPPFKLAQMRKNVDALDKSSREYQRTAWEALRKSINGLINK-----------VNAANVKNIIPELFELNLVRGRGLFARAIMKSQLASPGFTPVFAAVVAVVNTKLPENGELILKRVIVAFRRAFKRRDKIVATALAKFIAHLVNQQVAHELLALQLLTVLLENPTDDSVEIAVGFTREIGQLLMEVSPQGLHAVFERFRGILQEGVIDKRVQYTVEGLFATRKGGFADFPAVPKELDLVEREDQITFELGLDDELTKDEVLDVFRMDDK 382          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: A0A7S2MJ10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MJ10_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 1.010e-137
Identity = 205/277 (74.01%), Postives = 242/277 (87.36%), Query Frame = 1
Query:   58 GRTGGVYIPPFKLAQMQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDEK 888
            GRTGGVYIPPFKLA MQK+   M K +KE+QR+ WE LRK INGL+NK           VN  NIKM+ PE F+LNL+RGRGL ARA+MKAQLASPGFT ++AALVAV+NTKLPENGELI+KRVIV FRRAYKRRDKVVATA  KFI H++NQQV+HEL+ALQLLT+LLE+PTDDSVEIAVNFTKE+GQVL++LSP+GLHA+FERFRGILHEG+IDKRVQYTIE LFA+R+SGF D PAV PELDLV+R DQI+FE+GLEDKL+K+E+LD+F++DE+
Sbjct:   74 GRTGGVYIPPFKLAAMQKEMSKMNKTSKEFQRLKWEKLRKGINGLVNK-----------VNVANIKMLIPEFFELNLIRGRGLLARAIMKAQLASPGFTHIYAALVAVLNTKLPENGELIMKRVIVGFRRAYKRRDKVVATAFIKFIGHLINQQVSHELIALQLLTILLEDPTDDSVEIAVNFTKEVGQVLEQLSPRGLHAIFERFRGILHEGEIDKRVQYTIEGLFAVRRSGFEDFPAVLPELDLVDRSDQISFELGLEDKLDKQELLDVFKVDEE 339          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: A0A7S2WT31_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT31_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 7.960e-136
Identity = 212/273 (77.66%), Postives = 239/273 (87.55%), Query Frame = 1
Query:   58 GRTGGVYIPPFKLAQMQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFR 876
            GRTGGVYIPPFKLA MQK+   M KA+KEYQR+ WE LRK INGL+NK           VN  NIK I PELF+LNLVRG+GL ARAVMKAQLASPGFT +++ALVAV+NTKLPENGELI+KRVIV FRRAYKRRDKVVATA AKFIAH+VN QVAHELLALQLLTVLLEEPTDDSVEIAVNFTKE+GQ+L++LSP+GLHA+FERFRGILHEG+IDKRVQYTIE LFA+RKS FSD  AVP ELDLV+R+DQITFE GL+DKL+K+E+LD+FR
Sbjct:  169 GRTGGVYIPPFKLAAMQKEMAKMDKASKEYQRLKWEQLRKGINGLVNK-----------VNVANIKDIIPELFELNLVRGKGLLARAVMKAQLASPGFTHIYSALVAVLNTKLPENGELIVKRVIVGFRRAYKRRDKVVATAFAKFIAHLVNHQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEVGQLLEQLSPRGLHAIFERFRGILHEGEIDKRVQYTIEGLFAVRKSNFSDFLAVPDELDLVDRNDQITFEFGLDDKLDKQELLDVFR 430          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: F0Y926_AURAN (Uncharacterized protein Auran_987 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y926_AURAN)

HSP 1 Score: 384 bits (985), Expect = 5.190e-128
Identity = 189/277 (68.23%), Postives = 237/277 (85.56%), Query Frame = 1
Query:   55 TGRTGGVYIPPFKLAQMQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDE 885
            +GRTGG+Y+PPFK+A ++K    +  +++E+Q+++WE+LRK ING +NK           VN +NI+ I PEL +LNLVRGRGL  RA+MKAQLASPGFT ++AAL AV+NTKLPENGEL+LKRV+V FRRAYKRRDKVVATA AKF+ H+VN Q+AHEL+ALQLLTVLL+EPTDDSVEIAVNFTKE+GQ+L ++SP GL AVFERFRGILHEG IDKRVQYTIE LFA+RK+GF ++PAVP ELDLVER+DQITFE+ L+DK++KE++LD+FR+D+
Sbjct:   10 SGRTGGIYVPPFKIAALRKQTAGLDASSREFQKLSWESLRKGINGHVNK-----------VNVSNIRSIVPELLELNLVRGRGLLCRALMKAQLASPGFTHIYAALAAVLNTKLPENGELLLKRVVVGFRRAYKRRDKVVATAFAKFLGHLVNHQIAHELVALQLLTVLLDEPTDDSVEIAVNFTKEVGQLLDQVSPAGLLAVFERFRGILHEGAIDKRVQYTIEGLFALRKTGFLEYPAVPEELDLVEREDQITFELSLDDKIDKEDLLDVFRVDD 275          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: I2CP05_NANGC (Pre-mrna-splicing factor cwc-22 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP05_NANGC)

HSP 1 Score: 383 bits (983), Expect = 6.960e-127
Identity = 200/281 (71.17%), Postives = 233/281 (82.92%), Query Frame = 1
Query:   52 VTGRTGGVYIPPFKLAQMQKDAETMGK----ATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMD 882
            +TGRTGGVYIPPFKLAQM+   E  GK    ++K+YQR+ WEALRKSINGLINK           VN +N+  I PELFQ NLVRGRGLF RAVMKAQLASPGFT ++AALVAVVNTKLPE GEL+L+RVI AFRRAYKRRDKVVAT L KFIAH+VNQQVAHE+LALQ++ VLL EPTDDSVEIAV F K++G +L+E+SP+GL A+FERFRGILHEG IDKRVQYTIE LFA+RKS F D+PA+P  LDLVE++D+ITFE+ L+D + KEEMLD+FR D
Sbjct:    1 MTGRTGGVYIPPFKLAQMRAQMEAEGKKEDKSSKDYQRMTWEALRKSINGLINK-----------VNVSNLAHIVPELFQENLVRGRGLFVRAVMKAQLASPGFTHIYAALVAVVNTKLPEVGELLLRRVIFAFRRAYKRRDKVVATGLVKFIAHLVNQQVAHEILALQIVEVLLGEPTDDSVEIAVAFVKDVGMLLEEVSPKGLRAIFERFRGILHEGVIDKRVQYTIEGLFAVRKSNFVDYPAIPESLDLVEKEDKITFEMSLDDDINKEEMLDVFRFD 270          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: A0A7S3MAE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAE0_9STRA)

HSP 1 Score: 386 bits (991), Expect = 4.210e-124
Identity = 203/285 (71.23%), Postives = 233/285 (81.75%), Query Frame = 1
Query:   28 VLVDQPATVTGRTGGVYIPPFKLAQMQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMD 882
            ++ +QP+   GRTGGVYIPPFKLA M+K +E    A  E Q+ +WEALRKSINGLINK           +N +NIK I PELFQ NLVRGRGLFARAVMKAQLASPGFT ++A+LVAV+NTKLPENGELILKRVI  F+RAYKRRDK+ ATALA+FI          E+LAL LLTVLLEEPTDDSVEIAV F KE+GQ+L+ELSPQGLH VFERFRGILHEG IDKRVQYTIE LFA+RKSGF D+PA+P ELDLVER+DQITFEIG++D ++KEEMLDIFR+D
Sbjct:    1 MIAEQPSG--GRTGGVYIPPFKLAMMKKQSEANDPANAENQKASWEALRKSINGLINK-----------INVSNIKHIVPELFQENLVRGRGLFARAVMKAQLASPGFTHIYASLVAVINTKLPENGELILKRVIYGFKRAYKRRDKITATALARFIXXXXXXXXXXEILALHLLTVLLEEPTDDSVEIAVGFVKEVGQLLEELSPQGLHFVFERFRGILHEGDIDKRVQYTIEGLFAVRKSGFKDYPAIPKELDLVEREDQITFEIGMDDDIDKEEMLDIFRVD 272          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: A0A482RRR8_9ARCH (MIF4G domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRR8_9ARCH)

HSP 1 Score: 362 bits (930), Expect = 1.710e-123
Identity = 195/279 (69.89%), Postives = 225/279 (80.65%), Query Frame = 1
Query:   34 VDQPATVTGRTGGVYIPPFKLAQMQK--DAETMGKATK-EYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEM 861
            +DQP    GRTGGVYIPPFKLAQ +    A T  K  + E Q+++WEALRK+INGLINK           VN +NIK I PEL   NL+RGRGL  RAVMKAQLASPGFT ++AAL+AVVNTKLPE GEL+LKRVI  FRRAYKRRDK+ A  LAKFIAH+VN QVAHELLALQLLTVLLEEPT+DSVEIAV F KE+GQ L  LSPQGLHA+FERFRGILHEG IDKRVQYTIE LFA RK+GF+D+PAVP +LDLVER++Q+T E+GLED+++ E+M
Sbjct:    1 MDQPTG--GRTGGVYIPPFKLAQYKAALQASTQSKEAQIESQKLSWEALRKTINGLINK-----------VNVSNIKHIIPELLHENLIRGRGLLTRAVMKAQLASPGFTHIYAALIAVVNTKLPELGELLLKRVIYGFRRAYKRRDKLQAIGLAKFIAHLVNHQVAHELLALQLLTVLLEEPTNDSVEIAVGFVKEVGQTLDTLSPQGLHAIFERFRGILHEGDIDKRVQYTIEGLFATRKTGFTDYPAVPSDLDLVEREEQVTLELGLEDEIDPEDM 266          
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Match: A0A8J2SIE4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIE4_9STRA)

HSP 1 Score: 368 bits (944), Expect = 2.410e-120
Identity = 192/303 (63.37%), Postives = 234/303 (77.23%), Query Frame = 1
Query:   58 GRTGGVYIPPFKLAQMQKDAETMGKATKEYQRIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQVLQELSPQGLHAVFERFRGILHEGQ---------------------------IDKRVQYTIETLFAIRKSGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDE 885
            GRTGG+Y+PPFKLA ++++     K + E+QR++WEALRK INGL+NK           VN  NI+ I PEL +LNLVRGRGL  RA+MKAQLASPGFT ++AALVAV+NTKLPENGEL+LKRV+V FRRAY+RRDKVVAT  AKF+AH+ N QVAHEL+ALQLLTVLL++PTDDSVEIAV FTKE+GQ+L E+SP+GL AVFERFRGILHEG                            IDKRVQYTIE LFA RK+GF+D+PAVP +LDLVERDDQITFE+ L+DK+++EE LD+F++D+
Sbjct:   37 GRTGGIYVPPFKLAALRQEMADKDKRSAEFQRLSWEALRKGINGLVNK-----------VNVGNIRSIVPELLELNLVRGRGLLCRALMKAQLASPGFTHIYAALVAVLNTKLPENGELLLKRVLVGFRRAYRRRDKVVATGFAKFLAHLCNHQVAHELVALQLLTVLLDDPTDDSVEIAVQFTKEVGQLLDEVSPRGLLAVFERFRGILHEGAAPRPTPPRDPPRFRVARRDPKSIRPGVIDKRVQYTIEGLFAARKAGFADYPAVPDDLDLVERDDQITFELSLDDKVDREEALDVFKVDD 328          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11087.949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKF9_ECTSI3.380e-16095.80MI domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3XKB6_HETAK1.140e-14377.09Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835ZAM0_9STRA4.910e-14276.27MI domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S2MJ10_9STRA1.010e-13774.01Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2WT31_9STRA7.960e-13677.66Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
F0Y926_AURAN5.190e-12868.23Uncharacterized protein Auran_987 (Fragment) n=1 T... [more]
I2CP05_NANGC6.960e-12771.17Pre-mrna-splicing factor cwc-22 n=1 Tax=Nannochlor... [more]
A0A7S3MAE0_9STRA4.210e-12471.23Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482RRR8_9ARCH1.710e-12369.89MIF4G domain-containing protein (Fragment) n=1 Tax... [more]
A0A8J2SIE4_9STRA2.410e-12063.37Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11087contigEcto-sp13_S_contig11087:298..2540 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score468.0
Seed ortholog evalue3.3e-129
Seed eggNOG ortholog2880.D7FKF9
Preferred nameCWC22
Model size891
KEGG koko:K13100
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0071006,GO:0071012,GO:0071013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Exons4
EggNOG free text desc.RNA splicing
EggNOG OGsKOG2140@1,KOG2140@2759
Cds size891
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462575.3629293-CDS-Ecto-sp13_S_contig11087:297..5641681462575.3629293-CDS-Ecto-sp13_S_contig11087:297..564Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11087 298..564 -
1681462575.3762867-CDS-Ecto-sp13_S_contig11087:832..9371681462575.3762867-CDS-Ecto-sp13_S_contig11087:832..937Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11087 833..937 -
1681462575.388269-CDS-Ecto-sp13_S_contig11087:1300..16141681462575.388269-CDS-Ecto-sp13_S_contig11087:1300..1614Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11087 1301..1614 -
1681462575.4046252-CDS-Ecto-sp13_S_contig11087:2335..25401681462575.4046252-CDS-Ecto-sp13_S_contig11087:2335..2540Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11087 2336..2540 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11087.949.1prot_Ecto-sp13_S_contig11087.949.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11087 298..2540 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11087.949.1

>prot_Ecto-sp13_S_contig11087.949.1 ID=prot_Ecto-sp13_S_contig11087.949.1|Name=mRNA_Ecto-sp13_S_contig11087.949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
KPTAEPKVNVLVDQPATVTGRTGGVYIPPFKLAQMQKDAETMGKATKEYQ
RIAWEALRKSINGLINKATPGGLSLTLQVNTTNIKMIAPELFQLNLVRGR
GLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRA
YKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAV
NFTKEIGQVLQELSPQGLHAVFERFRGILHEGQIDKRVQYTIETLFAIRK
SGFSDHPAVPPELDLVERDDQITFEIGLEDKLEKEEMLDIFRMDEK*
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mRNA from alignment at Ecto-sp13_S_contig11087:298..2540-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11087.949.1 ID=mRNA_Ecto-sp13_S_contig11087.949.1|Name=mRNA_Ecto-sp13_S_contig11087.949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2243bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11087:298..2540- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCCAACGGCCGAGCCTAAGGTCAACGTCTTGGTAGATCAGCCGGCCAC GGTGACGGGAAGGACAGGCGGGGTGTACATCCCGCCTTTCAAGCTCGCGC AGATGCAGAAGGACGCCGAGACGATGGGCAAGGCGACCAAGGAGTACCAG AGGATCGCCTGGGAGGCGTTGCGCAAGAGCATCAACGGTCTCATCAACAA GGCAAGTCTGTGACTGCTGTGCCTACTGCTGTGCCGCTCGCTCACCAGAT GGCGCTTGACACTTGCTTGCCTCGTTATAAGTGGGACAACAGGGGGTGAT GGTGTAGTCTACGATCGATAGCAGACGTGTCAACACCACCAGTAGCTGGT GTGTGGTTCGTTTTCTCGTATGCTATCTCTGCTTACTCTCCTCTCGGCTG GTGTTGGGGTCTCGACCTTGTTCAGGCAGAAAATAAGACTTGCCGCGTAC GATTGTGTGCGGTATGTTCGTTGCGGTGATGAGATTGTAGCAAGGGCAAT GCTGGAGCTGTGATACTGGTTTTGGCATCTCCTGTGTGACATCTGGTGGC CGATGCCGCGTGCATGCTCATCTTTTGCGCCCGGTTGGAAGACAAGTGAC TCAGAAAGTAGAGGCACAGCAGTAGTAGAGATAATGGTGGAGCGAATGTG CACGACTTTTGACGCTGTCGATTCTCGTGGTGGGTCAAGGGAGTGGATTG CTGTGATCAAGCGTTGTGTGTTCTACAATACCGTAGCGCTACAATCTAAA CCAACCTCGGGCGCGGCGAAAGTCGTCGGGAAATGACAAGAATCGACTCC TTCGTTTTCTTCGACCAAGCGGGCGTGCGGCGTTTCCCATCCAACCGGGG GGCACCCGACCACACCACCGTGCCCAAACCCATCTTGCGCTCGTCATCCT CTCTACGAACGCTTCTGCACACTCAGCCCCCGGCGGCCTCTCCCTTACGT TGCAGGTAAACACGACCAACATCAAGATGATCGCGCCTGAGCTCTTCCAG CTCAACCTCGTGCGCGGCCGGGGGCTGTTCGCTCGCGCGGTCATGAAGGC GCAGCTGGCGTCGCCGGGCTTCACCCCCGTCTTCGCGGCGCTGGTGGCGG TGGTCAACACCAAGCTTCCCGAGAACGGGGAGCTGATCCTCAAGAGGGTC ATCGTGGCGTTCCGCCGCGCGTACAAGCGCAGGGACAAGGTGGTGGCCAC TGCTTTGGCCAAATTCATCGCGCACATGGTGAACCAACAGGTGAGAAGAC GTGAGCCTGCTCGGGCCCACGCATTACCTTTGAGGGTCGAATCAGCAGAG TTTTCATCATAGGTTGATACATTTTTGTAGATTACATCGGCAGCAACTGC TGACGGATTCTGGGGCGTCCAGTGGCAATGTTCCCACGGAAAACCGCGTG ATGAATTACGCCGACTACGGCAGTTTGGTTGAAATGCGTGTCAAATTGAC TGTTGCGTTGAGGCAGGCAGGGTGTTGTCCAAGATTGGTTACTTGTCCGT TTTTGCCTGTGTCTTCGAGGCGACCAAGCTTTGTTCGGATCCGCAACCGC ACGCGCATCCACGCGCGGCGTTCTTGCTGTAATTGTCTGCGCGAAATTTT CAGGTCGCGCACGAACTGCTGGCTCTTCAGCTGCTGACTGTGCTCCTCGA AGAGCCCACGGACGACTCCGTCGAGATCGCCGTCAACTTTACGAAAGAGA TTGGACAGGTATGTGACCTAAATAGCTATCACGTAACAGAAGAACGCGGT CACAGCAGCACCATGATGTCTCGTATTTTGTTCTTGTTCTTTTCCCTTGT TGCTTTTTGTGTTATGGCCACCGTGAGAAACTGCCTGGCCTTTACTTAAT GCCTTCACGGTGACAACCCGCACCGATCCCGGACCTGTGGAAACACAACG TTGTAACGCTTCCTTTGCCCCGTGCCGCGCCCTTGTGCGCGCGTGTGCCG TGTTTCTCGTGCGCGTGTGCCCGCAGGTGCTGCAGGAGCTCTCGCCGCAG GGCCTCCACGCGGTGTTCGAGCGGTTTCGCGGCATTCTCCACGAGGGTCA GATCGATAAGCGGGTTCAGTACACCATCGAGACCCTGTTCGCGATCCGCA AGAGCGGGTTCTCGGACCACCCTGCGGTGCCCCCCGAGCTGGACCTGGTG GAGCGGGACGACCAGATCACGTTCGAGATTGGGCTCGAGGACAAGCTGGA GAAGGAGGAGATGCTCGACATCTTCCGCATGGATGAGAAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11087:298..2540-

>mRNA_Ecto-sp13_S_contig11087.949.1 ID=mRNA_Ecto-sp13_S_contig11087.949.1|Name=mRNA_Ecto-sp13_S_contig11087.949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=891bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11087:298..2540- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCCAACGGCCGAGCCTAAGGTCAACGTCTTGGTAGATCAGCCGGCCAC
GGTGACGGGAAGGACAGGCGGGGTGTACATCCCGCCTTTCAAGCTCGCGC
AGATGCAGAAGGACGCCGAGACGATGGGCAAGGCGACCAAGGAGTACCAG
AGGATCGCCTGGGAGGCGTTGCGCAAGAGCATCAACGGTCTCATCAACAA
GGCAACCCCCGGCGGCCTCTCCCTTACGTTGCAGGTAAACACGACCAACA
TCAAGATGATCGCGCCTGAGCTCTTCCAGCTCAACCTCGTGCGCGGCCGG
GGGCTGTTCGCTCGCGCGGTCATGAAGGCGCAGCTGGCGTCGCCGGGCTT
CACCCCCGTCTTCGCGGCGCTGGTGGCGGTGGTCAACACCAAGCTTCCCG
AGAACGGGGAGCTGATCCTCAAGAGGGTCATCGTGGCGTTCCGCCGCGCG
TACAAGCGCAGGGACAAGGTGGTGGCCACTGCTTTGGCCAAATTCATCGC
GCACATGGTGAACCAACAGGTCGCGCACGAACTGCTGGCTCTTCAGCTGC
TGACTGTGCTCCTCGAAGAGCCCACGGACGACTCCGTCGAGATCGCCGTC
AACTTTACGAAAGAGATTGGACAGGTGCTGCAGGAGCTCTCGCCGCAGGG
CCTCCACGCGGTGTTCGAGCGGTTTCGCGGCATTCTCCACGAGGGTCAGA
TCGATAAGCGGGTTCAGTACACCATCGAGACCCTGTTCGCGATCCGCAAG
AGCGGGTTCTCGGACCACCCTGCGGTGCCCCCCGAGCTGGACCTGGTGGA
GCGGGACGACCAGATCACGTTCGAGATTGGGCTCGAGGACAAGCTGGAGA
AGGAGGAGATGCTCGACATCTTCCGCATGGATGAGAAGTGA
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