mRNA_Ecto-sp13_S_contig11073.938.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11073.938.1
Unique NamemRNA_Ecto-sp13_S_contig11073.938.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 9.470e-160
Identity = 279/321 (86.92%), Postives = 295/321 (91.90%), Query Frame = 1
Query:    1 VPMCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYCSITGEAPCMTSPAPTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVEAVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGSESCCGGGVRATGRYCSITGEAPCITGAAPTPAXXXXXXXXXXXXXTVEVPKCDGGIIGIQTIDVCCSLSCGSCGGSGCTARDGGSESCCGGGVRASGRDCSVTGEAPCVVTSKPIRVKM 963
            VPMCDG +VGIQ+SDVCCSASCGSCGGSGCT RDGGSESCCGGGVRA+GRYCSITGEAPCMT PAPTP+     XXXXX   VPMCDG I+GIQ+SDVCCSASCGSCGGSGC+ RDGGSESCCGGGVRA+GRYCSITGEAPCMT GPAPT  XXXXXXXXX+VE VPMCDG +VGIQ+SDVCCSASCG+CGG GC+GRDGGSESCCGGGVRA+GRYCSITGEAPC+TGAAPTPAXXXXXXXXX    TVEVPKCDGGI+GIQ  DVCCSLSCGSCGGSGCT RDGGSESCCGGGVRASGRDCSVTGEAPCVVTSKPIRVKM
Sbjct:   61 VPMCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGSESCCGGGVRASGRYCSITGEAPCMTGPAPTPDXXXX-XXXXXTVEVPMCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGSESCCGGGVRASGRYCSITGEAPCMT-GPAPTPDXXXXXXXXXTVE-VPMCDGDIVGIQSSDVCCSASCGTCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTGAAPTPAXXXXXXXXX----TVEVPKCDGGIVGIQASDVCCSLSCGSCGGSGCTGRDGGSESCCGGGVRASGRDCSVTGEAPCVVTSKPIRVKM 374          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 4.520e-146
Identity = 267/316 (84.49%), Postives = 287/316 (90.82%), Query Frame = 1
Query:    1 VPMCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYCSITGEAPCMTSPAPTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVEAVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGSESCCGGGVRATGRYCSITGEAPCITGAAPTPAXXXXXXXXXXXXXTVEVPKCDGGIIGIQTIDVCCSLSCGSCGGSGCTARDGGSESCCGGGVRASGRDCSVTGEAPCVVTSKP 948
            V MCDGG+VGIQ+SDVCCSASCGSCGGSGC+ RDGGSESCCGGGVRA+GRYCS+TGEAPCMTSPAPT       XXXXXXX +PMCDGGI+GIQTSDVCCSASCGSCGGSGC+GRDGGSESCCGGGVRA+GRYCSITGEAPCMT GPAPT XXXXXXXXXX+VE VPMCDGG+VGIQ+SDVCCSASCGSCGG GC+GRDGGSESCCGGGVRA+GRYCSITGEAPC+TG APTP XXXXXXXXX    TVEVP CDGGI+GIQ+ DVCCS SCGSCGGSGC+ RDGGSESCCGGGVR SGR CSVTGEAPC+  + P
Sbjct:   74 VSMCDGGIVGIQSSDVCCSASCGSCGGSGCSSRDGGSESCCGGGVRASGRYCSVTGEAPCMTSPAPTXXXXXX-XXXXXXXEIPMCDGGIVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMT-GPAPTPXXXXXXXXXXTVE-VPMCDGGIVGIQSSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXX----TVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRGSGRYCSVTGEAPCMTGAAP 382          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 8.020e-142
Identity = 245/313 (78.27%), Postives = 277/313 (88.50%), Query Frame = 1
Query:    1 VPMCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYCSITGEAPCMTSPAPTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVEAVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGSESCCGGGVRATGRYCSITGEAPCITGAAPTPAXXXXXXXXXXXXXTVEVPKCDGGIIGIQTIDVCCSLSCGSCGGSGCTARDGGSESCCGGGVRASGRDCSVTGEAPCVVT 939
            VPMCDGG+VGIQ  +VCCSASCGSCGG GC+GRDGGS++CCGGGV A+GR C++TGEAPC+T PAPTPE     XXXXX   VPMCDGGI+GIQ  +VCCSASCGSCGG GCSGRDGGS++CCGGGV A+GR C++TGEAPC+T GPAPT  XXXXXXXXX+VEA PMCDGG++GIQTSDVCCSASCGSC G GCSGRDGG ++CCGGGVRA+GR+CS+TGEAPCITG APTP XXXXXXXXX    T+EVP+CDGGI+GIQ  DVCCSLSCGSCGGSGC+ RDGGS++CCGGGVRASGR CSVTGEAPC+VT
Sbjct:  232 VPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCAVTGEAPCITGPAPTPEXXXX-XXXXXTVEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCAVTGEAPCIT-GPAPTPEXXXXXXXXXTVEA-PMCDGGIIGIQTSDVCCSASCGSCXGSGCSGRDGGPDACCGGGVRASGRFCSVTGEAPCITGPAPTPXXXXXXXXXX----TIEVPECDGGIVGIQASDVCCSLSCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCLVT 537          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 433 bits (1113), Expect = 6.770e-141
Identity = 247/315 (78.41%), Postives = 270/315 (85.71%), Query Frame = 1
Query:    1 VPMCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYCSITGEAPCMTSPAPTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVEAVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGSESCCGGGVRATGRYCSITGEAPCITGAAPTPAXXXXXXXXXXXXXTVEVPKCDGGIIGIQTIDVCCSLSCGSCGGSGCTARDGGSESCCGGGVRASGRDCSVTGEAPCVVTSK 945
            V MCDGG+VGIQTSDVCCSASCGSCGG+GC+GRDGGS +CCGGGVRA+GRYCS+TGEAPCMT                    VPMCDGGI+GIQ SDVCCSASCGSC G+GCSGRDGGS +CCGGGV+A+GRYCS+TGEAPCMT GPAPT XXXXXXXXXX+VE VPMCDGG+VGIQTSDVCCSASCGSCGG GCS RDGGS +CCGGGVRA+GRYCS+TGEAPC+TGAAPTP XXXXXXXXX    TVEVP CDGGI+GIQT DVCCS SCGSCGG+GC+ RDGGS +CCGGGVRASGR CSVTGEAPC+   K
Sbjct:   43 VSMCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMT--------------------VPMCDGGIVGIQASDVCCSASCGSCAGTGCSGRDGGSGACCGGGVQASGRYCSVTGEAPCMT-GPAPTPXXXXXXXXXXTVE-VPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXX----TVEVPMCDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCMTVPK 331          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: D7G5D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D5_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 1.030e-97
Identity = 167/234 (71.37%), Postives = 188/234 (80.34%), Query Frame = 1
Query:    1 VPMCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYCSITGEAPCMTSPAPTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVEAVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGSESCCGGGVRATGRYCSITGEAPCI-TGAAPTP 699
            V  CDGG+VGIQ SD+ CS+SCGSCGG+GCT RDGGSE+CCGGGVRA+GRYCS+TGEAPCMT PAPTPE     XXXXX   V MCDGGI+GIQ SD+CCS+SCGSCGG+GC+ RDGGSE+CCGGGVRA+GRYCS+TGEAPCMT                     VPMCDGG+VGIQ SDVCCS SCGSCGG GC+ RDGGSE+CCGGGVRA+GR CS+TGEAPC+ TG A TP
Sbjct:   61 VETCDGGIVGIQQSDISCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCMTGPAPTPEXXXX-XXXXXTDEVSMCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCMT-------------------NEVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGSEACCGGGVRASGRDCSVTGEAPCVVTGPAFTP 274          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: A0A6H5JVC9_9PHAE (AMOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC9_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 9.420e-97
Identity = 183/233 (78.54%), Postives = 211/233 (90.56%), Query Frame = 1
Query:  247 VPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVE-AVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGSESCCGGGVRATGRYCSITGEAPCITGAAPTPAXXXXXXXXXXXXXTVEVPKCDGGIIGIQTIDVCCSLSCGSCGGSGCTARDGGSESCCGGGVRASGRDCSVTGEAPCVVTS 942
            VP CDGGI+GIQ+SDVCCS SCGSCGG+GC+GRDGG+++CCGGGVR++GR+CS+TGEAPC+T GPAPT    XXXXXXX  E AVPMCDGG+VGIQ+SDVCC++SCGSCGG GC+GRDGG ++CCGGGVRA+GRYCS+TGEAPC+TG APTP XXXXXXXXX    T EVP CDGGI+GIQ+ DVCCSLSCGSCGG+GCT RDGG+++CCGGGVRASGRDCSVTGEAPCVVTS
Sbjct:   50 VPTCDGGIVGIQSSDVCCSLSCGSCGGTGCTGRDGGADACCGGGVRSSGRFCSVTGEAPCIT-GPAPTPEPTXXXXXXXXDEGAVPMCDGGIVGIQSSDVCCTSSCGSCGGSGCTGRDGGEDACCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXX----TEEVPMCDGGIVGIQSSDVCCSLSCGSCGGTGCTVRDGGADACCGGGVRASGRDCSVTGEAPCVVTS 277          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: D7G3T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T6_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.520e-96
Identity = 168/234 (71.79%), Postives = 190/234 (81.20%), Query Frame = 1
Query:    1 VPMCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYCSITGEAPCMTSPAPTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVEAVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGSESCCGGGVRATGRYCSITGEAPCI-TGAAPTP 699
            VPMCDGG+VGIQ SD+CCS+SCGSCGG+GCT RDGGSE+CCGGGVRA+GR+CS+TGEAPCMT PAPTP      XXXXX   VPMCDGGI+GIQ SD+CCS+ CGSCGG+GC+ RDGGSE+CCGGGVRA+GRYCS+TGEAPCMT                     VPMCDGG+VGIQ SDVCCS SCGSCGG GC+ RDGGSE+CCGGGVRA+GR CS+TGEAPC+ TG A TP
Sbjct:   22 VPMCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRFCSVTGEAPCMTGPAPTPXXXXX-XXXXXTDEVPMCDGGIVGIQQSDICCSSRCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTGEAPCMT-------------------NEVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGSEACCGGGVRASGRDCSVTGEAPCVVTGPAFTP 235          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: A0A6H5K3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y1_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 2.760e-95
Identity = 172/224 (76.79%), Postives = 193/224 (86.16%), Query Frame = 1
Query:    7 MCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYCSITGEAPCMTSPAPTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVEAVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGSESCCGGGVRATGRYCSITGEAPCI 678
            MC+GG+ GIQ SDVCCS SCGSCGGSGC+GRDGGS++CCGGGVRA+GR+CSIT EAPCMT PAPTP      XXXXX   VPMCDG I+GIQ SDVCCSASCGSCGGSGCSGRDGGS++CCGGGVRA+GR+CS+TGEAPCMT GPAPT    XXXXXXX+VE VPMCDGG+VGIQ SDVCCSASCGS     C+GRDGG ++CCGGGVRA+G  CS+TGEAPC+
Sbjct:  179 MCEGGIAGIQASDVCCSVSCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSITEEAPCMTGPAPTPXXXXX-XXXXXTVEVPMCDGEIVGIQASDVCCSASCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCMT-GPAPTTEPTXXXXXXXTVE-VPMCDGGIVGIQASDVCCSASCGSXXXXXCTGRDGGPDACCGGGVRASGLLCSVTGEAPCL 399          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: A0A6H5JVK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK3_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 6.850e-43
Identity = 88/115 (76.52%), Postives = 96/115 (83.48%), Query Frame = 1
Query:    7 MCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYCSITGEAPCMTSPAPTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDVCCSASCGSCGGSGCSGRDG 351
            MCDGG+VGIQ SDVCCSASCGSCGGSGC+GRDGGS++CCGGGVRA+GR+CS+TGEAPCMT PAPTP      XXXXX   VPMCDGGI+GIQ SDVCCSASCGS       GRDG
Sbjct:    1 MCDGGIVGIQASDVCCSASCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCMTGPAPTPXXXXX-XXXXXTVEVPMCDGGIVGIQASDVCCSASCGSXXXXXXXGRDG 114          
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 4.300e-35
Identity = 112/271 (41.33%), Postives = 142/271 (52.40%), Query Frame = 1
Query:  193 APTPESTLAPXXXXXXXTVPMCDGGIIGIQTSDV-CCSASCGSCGGSGCS------GRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTXXXXXXXXXXXSVEAVPMCDGGVVGIQTSDV-CCSASCGSCGGYGCS------GRDGGSESCCGGGVRATGRYCSITGEAPCITGAAPTPAXXXXXXXXXXXXXTVEVPKCDGGIIGIQTIDV-CCSLSCGSCGGSGCTARDG----GSESCCGGGVRASGRDCSVTGEAPCVVTSKP 948
            APTP      XXXXXX +   C  G+ GI  + V CC  +CG CGG+GC+      G DG   SCCGGGV+A+  YC  T EAPC+  G  PT           S  +   C  G+ GI  + V CC   CG CGG GC+      G DG   SCCGG ++A+G+YC  T +APCI G++P P+                   C  G+ GI    V CC L CG CGG+GCT        G++SCCGG ++AS   C  T EAPC++ S+P
Sbjct:  172 APTPALXXXXXXXXXXSSARTCSNGLEGIDANGVVCCPLACGQCGGTGCNTSGAAFGLDG--SSCCGGGVKASDEYCDETNEAPCII-GSRPTP----------SPTSANTCSNGLEGIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDG--SSCCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSE-------------TCSNGVEGIDGNGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCIIGSRP 414          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11073.938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTV1_9PHAE9.470e-16086.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G4E0_ECTSI4.520e-14684.49N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5JWJ0_9PHAE8.020e-14278.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3U7_ECTSI6.770e-14178.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5D5_ECTSI1.030e-9771.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVC9_9PHAE9.420e-9778.54AMOP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G3T6_ECTSI1.520e-9671.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3Y1_9PHAE2.760e-9576.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVK3_9PHAE6.850e-4376.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC43_9PHAE4.300e-3541.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11073contigEcto-sp13_S_contig11073:716..5558 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score170.6
Seed ortholog evalue1.3e-39
Seed eggNOG ortholog2880.D7FJ68
Preferred nameMTPAP
Model size1927
KEGG koko:K08342,ko:K16462,ko:K17478,ko:K18060
KEGG Pathwayko04136,ko04138,ko04140,map04136,map04138,map04140
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.importin-alpha family protein binding
EggNOG OGsCOG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759
EC2.7.7.19
Cds size1059
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11073.938.1prot_Ecto-sp13_S_contig11073.938.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11073 722..4619 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462574.2811308-UTR-Ecto-sp13_S_contig11073:715..7211681462574.2811308-UTR-Ecto-sp13_S_contig11073:715..721Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11073 716..721 +
1681462574.358638-UTR-Ecto-sp13_S_contig11073:4619..47941681462574.358638-UTR-Ecto-sp13_S_contig11073:4619..4794Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11073 4620..4794 +
1681462574.3666122-UTR-Ecto-sp13_S_contig11073:4871..55581681462574.3666122-UTR-Ecto-sp13_S_contig11073:4871..5558Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11073 4872..5558 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462574.2945755-CDS-Ecto-sp13_S_contig11073:721..9021681462574.2945755-CDS-Ecto-sp13_S_contig11073:721..902Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11073 722..902 +
1681462574.3034267-CDS-Ecto-sp13_S_contig11073:1479..15361681462574.3034267-CDS-Ecto-sp13_S_contig11073:1479..1536Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11073 1480..1536 +
1681462574.3121943-CDS-Ecto-sp13_S_contig11073:2077..22661681462574.3121943-CDS-Ecto-sp13_S_contig11073:2077..2266Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11073 2078..2266 +
1681462574.3210654-CDS-Ecto-sp13_S_contig11073:2672..27321681462574.3210654-CDS-Ecto-sp13_S_contig11073:2672..2732Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11073 2673..2732 +
1681462574.332406-CDS-Ecto-sp13_S_contig11073:3098..32871681462574.332406-CDS-Ecto-sp13_S_contig11073:3098..3287Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11073 3099..3287 +
1681462574.3427937-CDS-Ecto-sp13_S_contig11073:3734..38031681462574.3427937-CDS-Ecto-sp13_S_contig11073:3734..3803Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11073 3735..3803 +
1681462574.3508-CDS-Ecto-sp13_S_contig11073:4305..46191681462574.3508-CDS-Ecto-sp13_S_contig11073:4305..4619Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11073 4306..4619 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11073.938.1

>prot_Ecto-sp13_S_contig11073.938.1 ID=prot_Ecto-sp13_S_contig11073.938.1|Name=mRNA_Ecto-sp13_S_contig11073.938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=353bp
MCDGGVVGIQTSDVCCSASCGSCGGSGCTGRDGGSESCCGGGVRATGRYC
SITGEAPCMTSPAPTPESTLAPTPAPTPETVPMCDGGIIGIQTSDVCCSA
SCGSCGGSGCSGRDGGSESCCGGGVRATGRYCSITGEAPCMTAGPAPTPE
PTPAPTPPPSVEAVPMCDGGVVGIQTSDVCCSASCGSCGGYGCSGRDGGS
ESCCGGGVRATGRYCSITGEAPCITGAAPTPAPSPAPSPAPTPPPTVEVP
KCDGGIIGIQTIDVCCSLSCGSCGGSGCTARDGGSESCCGGGVRASGRDC
SVTGEAPCVVTSKPIRVKMCVSMRTSNFRTHTFGNTHGRGSILVVFLRVW
PL*
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mRNA from alignment at Ecto-sp13_S_contig11073:716..5558+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11073.938.1 ID=mRNA_Ecto-sp13_S_contig11073.938.1|Name=mRNA_Ecto-sp13_S_contig11073.938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4843bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11073:716..5558+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCCCGATGTGCGACGGCGGAGTTGTCGGCATCCAAACAAGCGATGTGTG CTGCTCCGCAAGCTGCGGGTCTTGCGGAGGTTCTGGGTGCACGGGCAGAG ACGGTGGATCGGAATCCTGCTGTGGTGGCGGAGTCAGAGCTACCGGTCGG TACTGCTCCATCACGGGAGAAGCGCCCTGCATGACCAGTGAGTCGATAGG AACGATCGAGGCTTGTCCGGGCGTCGAAATGAACAACTCACACCCTATCG TTAGAGTTTTCTCCCCCACGTTGGCCCCTCGGGAACTGGGATTTTCTCCA TGCGTGGTTTAAACCACATCAACATAGGTGTCATGGATCAAGCAATATAT AAATGTGCTTGGAGAATGCTCGCTCGCGATTTGCTCTTTAACAGCAGTAT GGACCAGACACCGGAAAAGGATCACTTTCCGCGGGGGCCGATCCTCTACC CTTCCCGTGCCCTCTCGCTCCTCGCGAACGTGTTCACGTTTTGACGGCTT CATTACGTCTCGACACACCGCTCTCTTGTACTCTTTGGTGTCGTCTTTCT TCTTTCTGATCTTAACTTCCCCCTAAACTCTCACCGTTATCTATCCCGGT GTGACCGCCCGCCCCATGGGGTGGGGGGGCAATCCTTTACCAGTGTGTGA AACGGATAGCCACATCAGGAATATATAAACTTCAGTGAACCATGTGTTCA GTTGGAACTGATTATTGTCTTGGAATATTGCCCCAACAGACCATCACCTT TCCCGATTTGTCAGGCCCAGCCCCTACGCCGGAATCTACGCTGGCCCCTA CCCCTGCTCCCACACCTGAAAGTAAGTGGCTCTCGTCGGTATGCGTGAAA ACGTACAGGACGCCTTCAGCATCGCATGCCGACCTGAAAAGTAGTGTCCA CTGTACGCGTCGTGTTCGTCGTGGCTCCTTGAAACTGCACGTGTTTCGGG CGACAGCTTCGATGTCCTAGGTTAGATAATGAAAGCGGTACTTGACTGAC CCGGGTTTTGGTCGCCCCATCATTGCTCATGTAGGACAGATGCCTGTCGT GTGTTCTTGGAAACGCTTATCATAAAGGTCGACGCCATTTGGGTTGCATC TGCAGGAGATGATCACCGGTGTTCATTGCCCCGATATTTCCCACTGTCCT GTCTCGTCTCTGGGAGCGTGCTTTGCTTGACTGACTGACTCTGAACATTG ATGATAATTATCTGAACATCGACTTCAAGCTGGAAATAACCACCCACAAC ACACCGGGTCGTGTCCGTAATAAAACAATAATGACGTCTGATCGGCGTTG TCTCACTTGAACCTCCTTTCTGAGGTGGCTGTGTGTTGAATGCCGTCTTC GTCCAAACCGAGCAGTCCCGATGTGCGACGGCGGAATTATCGGCATCCAG ACAAGCGATGTGTGCTGCTCCGCAAGCTGCGGGTCTTGCGGAGGTTCTGG GTGCTCTGGCAGGGACGGTGGATCGGAATCCTGCTGTGGTGGCGGAGTCA GGGCTACCGGTCGGTACTGCTCCATCACGGGAGAAGCGCCCTGCATGACC GGTGAGTCAAAAGAAGCGATCGACGCCTGTGCACACATTGAGGTGATGTA CTCGCAGTTTGTTAATACACCATCCTTGGAGTTTGCCCCTCAAGTGCCTG GCCCTCGATTACTACATGTGCATATGTTCCATCCCGTGCCCCGCCTGACG TAGGAGCGGGTATGTTGAGCGATTGGAACTTGATCCGCACGAAGTAGATT TCTTTCAAGAATTGAAACGGACAAGCGCAGCTGGATATTAGACATGTTAA CTAGCAGACGTGTTAACATCGCCGTACCATACTCCGAAACCAGCCTCGTT GCCGATCACAGAATCACTTTTACCTTCATCGATGTCTTCAATCGAGCGTC ATATTACAACACTACGCCAACAGCACTCGATGCGAACGCCTGCCAAATTT GTGGAAGCAGGCCCGGCCCCTACCCCGGAACCCACCCCGGCCCCTACGCC ACCCCCTTCAGTTGAAGGTAAGCGGTGCTCCGTTGCCTTGCGTTCAAAAC TACTGTACTCTTTCATCATCGCAAATATATGTTGTCGACCAGAACAGTGT CCATTGTGCACGACGTCCTACGATAGTCGCGGCTACTTTGAAACTAGGAG TTGTATGTGCTTGGTGGTGCAGCTTCGATTCCGTAGAGTGATCTTTGAAA GCACCCTAGCGATGCTCATGTAGCATGGACGTCTGTCGCACCTATATGGA ATGACTCAGATGTAGTCAGCGCATGTTGTGCTCCGTCTCAACGGCGGGCA TCGACTGTTCGACTGCGTTGTCTCATTTGAACCAACGTCTACGATGGCGG CTGTGATTTGAATTTTGTCTCATGCAAACCGAGCAGTCCCGATGTGCGAC GGCGGAGTTGTTGGCATCCAGACTAGCGATGTGTGCTGCTCCGCAAGCTG CGGGTCTTGCGGAGGTTATGGGTGCTCTGGCAGGGACGGTGGATCGGAAT CCTGCTGTGGTGGCGGAGTCAGAGCTACCGGTCGGTACTGCTCCATTACG GGAGAAGCGCCCTGCATAACCGGTGAGTCAAAAGGAGCGATCGACGCTTG ATCGCACTTCTGGTAACATTTTCGTTAGAGTTTGCTCCTGCGACGTTTGC CCCTTGATTACTGCATGTGAATACATGCTCCCTATTGTCCGTTTACTCCT TCTTCGAGAGACATATGTCAAATGGTTGAAACTTGATCCATGTGCTAGAG ATGAAAACCAACAACATTGCTCCGAAGAATATAGACGGGCAGCCACAACT GGATAAAATATGATTGGCAGTAACCGTGACATGTTTTTGTAGAGACCACT TCTGTGCTTCCATGAACAGTGTAAAACCCCGAGCTACTAACAAGCATCGG GAGTATTAAAATGGCTGCGCAGTATGCCCCGCATCAACGTTTTCAGTCGA ACGTCATCTTGTATGTAGAAAAACTCCCCGACCATAACATGGAACGAAAA CCTTCCCACTAACAAACAGGTGCGGCCCCCACGCCGGCCCCTTCGCCGGC CCCTTCGCCGGCCCCTACGCCACCCCCTACAGTTGAAGGTAAGCGGTGCT CCGTTGATGCCTTGCGTTCAAAGCGATGGTGTAGCTTCAGGATCCCACGG TTTTATTGATGTCGTGAGATATTGGTGACTGTCGTGATAATACCTGCTAG TGATCAGATCATCAGTCTTATAGGTAGCTCATATAGCTCGGAAGCCTATT GCGCCTTTTCCAAATGATTTTGGTGTATGCAAAAGACAGCGCATGTTGTG AACTGCAAGGCATATAACGACCTTTTGGCTGATGCGTACGTTACTATCAC GTTTCGCACTGGCACGTCTTGAGTTTCTGTGAGTGCACTGTCTTGACTGT CATATCTCTGAATGATTGCTACCTATCGTGAGGCGCCAAATCAGCTCAAG TGAAAGAACACCCCCACGATGACGCCACAACCCAGGGTAGTGAGCTGTTG ACCGCAAATGACGTCTTGGTAGGTGTTATCTCACTTGAACTCGCCTCTAC TAAGCACCACCGCTGTTTCTTTTTAATCCTCAATGAACAGTTCCAAAGTG CGACGGCGGGATTATCGGTATTCAGACGATTGATGTATGCTGTTCCTTAA GCTGCGGTTCTTGCGGGGGTTCTGGGTGCACTGCCAGGGACGGTGGATCG GAATCCTGCTGTGGAGGCGGAGTTAGGGCCTCCGGCCGTGATTGCTCTGT TACGGGAGAAGCACCCTGCGTTGTGACAAGTAAGCCGATTCGAGTGAAAA TGTGCGTGTCCATGCGCACGTCGAACTTTCGAACGCACACTTTTGGAAAT ACTCACGGTCGAGGCAGCATTTTAGTGGTGTTCCTCCGAGTTTGGCCCCT GTGAAACTGCATCTCACTCGATCTTGTGGAGGCATGTTGAGCGGTCGAAA CGTAAGGTTCATTCCAACACGCGTACTATGCATGCGTAAAATTGAAACGG CCGGCCACACACCGGACATCAGGTTCAATGTGAGAATGACTTGTACTGTG CAGCTGCCACTCTTTCCTTTCAGGCACTAGTTGATAAACCAGTATGAGAC CTGCACGTGAAAAAAGCCACACGATAGGAAACCAAACGGCTCTCTGCTTG CTCAAGCGTATTTAGTCGACCGTCCTCTCCTAAAAACACTGCACCAAATG AATATTACGGACGAACGCTAAAATCGTGGAAATAGGCCCCGCCATGACGC CGACGCCCACGACCGTCACGGCTGCGCCCGGAACAACGCCGACCCCTACG ACTGTCACGAACTCGCCGGCCACTACCTCTACCCCTACAACGGTCACGGC ATCGACGATCGCGCCCACGCCGGCCCCCACCGGAGGTCGTGATGGCCGTC GTACGCCGGCCCCTACTATGACCGCGGGAACGCCGACCCCCACGTCTGTA GGTGGTGCGACGCCGGCCCCTTCCGGCAGACGTGGTGGCCGTGGTACGCC GGCCCCTACCATGACCGCGGGAACGCCGGCCCCCACGTCTGTAGGTGGTA CTACGCCGGCCCCCGCCGGGGGTCGTGGTGGCCGTGGTACGCCGGCCCCT ACCATGACCGCGGGAACGCCGGCCCCTACGTCTGTAGGTGGTACTACGCC GGCCCCCGTCGGAGGTCGTGGAGGCCGCGGTACGCCGACCCCTACAATGA CCGCGGGAACGCCGACCCCCACGTCTGTAGGTGGTACTACGCCGGCCCCC GCCGGGGGACGTGGAGGCCGTGGTACGCCGGCCCCTACCATGACCGCGGG AACGCCGACCCCCACGTCTGTAGGTGGTACTACGCCGGCCCCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11073:716..5558+

>mRNA_Ecto-sp13_S_contig11073.938.1 ID=mRNA_Ecto-sp13_S_contig11073.938.1|Name=mRNA_Ecto-sp13_S_contig11073.938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1059bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11073:716..5558+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGCGACGGCGGAGTTGTCGGCATCCAAACAAGCGATGTGTGCTGCTC
CGCAAGCTGCGGGTCTTGCGGAGGTTCTGGGTGCACGGGCAGAGACGGTG
GATCGGAATCCTGCTGTGGTGGCGGAGTCAGAGCTACCGGTCGGTACTGC
TCCATCACGGGAGAAGCGCCCTGCATGACCAGCCCAGCCCCTACGCCGGA
ATCTACGCTGGCCCCTACCCCTGCTCCCACACCTGAAACAGTCCCGATGT
GCGACGGCGGAATTATCGGCATCCAGACAAGCGATGTGTGCTGCTCCGCA
AGCTGCGGGTCTTGCGGAGGTTCTGGGTGCTCTGGCAGGGACGGTGGATC
GGAATCCTGCTGTGGTGGCGGAGTCAGGGCTACCGGTCGGTACTGCTCCA
TCACGGGAGAAGCGCCCTGCATGACCGCAGGCCCGGCCCCTACCCCGGAA
CCCACCCCGGCCCCTACGCCACCCCCTTCAGTTGAAGCAGTCCCGATGTG
CGACGGCGGAGTTGTTGGCATCCAGACTAGCGATGTGTGCTGCTCCGCAA
GCTGCGGGTCTTGCGGAGGTTATGGGTGCTCTGGCAGGGACGGTGGATCG
GAATCCTGCTGTGGTGGCGGAGTCAGAGCTACCGGTCGGTACTGCTCCAT
TACGGGAGAAGCGCCCTGCATAACCGGTGCGGCCCCCACGCCGGCCCCTT
CGCCGGCCCCTTCGCCGGCCCCTACGCCACCCCCTACAGTTGAAGTTCCA
AAGTGCGACGGCGGGATTATCGGTATTCAGACGATTGATGTATGCTGTTC
CTTAAGCTGCGGTTCTTGCGGGGGTTCTGGGTGCACTGCCAGGGACGGTG
GATCGGAATCCTGCTGTGGAGGCGGAGTTAGGGCCTCCGGCCGTGATTGC
TCTGTTACGGGAGAAGCACCCTGCGTTGTGACAAGTAAGCCGATTCGAGT
GAAAATGTGCGTGTCCATGCGCACGTCGAACTTTCGAACGCACACTTTTG
GAAATACTCACGGTCGAGGCAGCATTTTAGTGGTGTTCCTCCGAGTTTGG
CCCCTGTGA
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