mRNA_Ecto-sp13_S_contig11071.936.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 296 bits (759), Expect = 6.340e-100 Identity = 145/159 (91.19%), Postives = 152/159 (95.60%), Query Frame = 1
Query: 1 MALAAFAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTTGRFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPGEAGYSLTVTSPSDGDTAMAGEVYTVE 477
MA AFAA+AFGMLS+ NALEVVSP GGISV+A+RAYTVEWTGTTTGRFEIDLYYC+SFCM+DVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTL+AS DAPE GE GYSLTVTSPSDGDTAMAGEVYTVE
Sbjct: 1 MARTAFAAVAFGMLSAANALEVVSPDGGISVLADRAYTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVE 159
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 265 bits (676), Expect = 2.670e-87 Identity = 130/159 (81.76%), Postives = 140/159 (88.05%), Query Frame = 1
Query: 1 MALAAFAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTTGRFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPGEAGYSLTVTSPSDGDTAMAGEVYTVE 477
MA AFAALAFGML + NALEVVSP+ GISVIA+R YTVEWTGT+ RFEIDLYYC SFCMED CGDWVTALCPYGADGCPD+ GDYDI+MPEPM+GTSSGYKV+V ++ DES MGCS DFTLVASTDAP GE GYSLTVTSPSDGDTAMAG VYTVE
Sbjct: 1 MARTAFAALAFGMLGAANALEVVSPAAGISVIADRTYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSSGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVE 159
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 239 bits (609), Expect = 3.800e-77 Identity = 115/159 (72.33%), Postives = 133/159 (83.65%), Query Frame = 1
Query: 1 MALAAFAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTTGRFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPGEAGYSLTVTSPSDGDTAMAGEVYTVE 477
MA AFAALAFGML + NALEVVSP+ G V+A+ AYTVEWTG T+GR++IDLYYC S CMED CGDWVTALCPYG DGCPD+ GDYD++MPEPM GTSSGYKVMV ++ DESD GCS DFTL+AST+AP+ + G ++VTSPSDGDTAMAG YTVE
Sbjct: 1 MARTAFAALAFGMLGAANALEVVSPAAGDMVVADSAYTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGAYVSVTSPSDGDTAMAGGEYTVE 159
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 213 bits (542), Expect = 6.330e-67 Identity = 108/161 (67.08%), Postives = 125/161 (77.64%), Query Frame = 1
Query: 1 MALAAFAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTTGRFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPG-EAGYSLTVTSPSDGDTAMAGEVYTVE 477
MA F ALA ML + NALEVV+PS + V+A+R YTVEWTG +GRFEIDLY+C S CMED CGDWVTALCPYG +GCPD+ GDYDI+MPEPMSG S SGYKV V + DE M CSD F L+AS DAP+ G E+GY LTVTSP++GD+A AGE YTVE
Sbjct: 1 MARTGFVALACAMLGAANALEVVTPSADLIVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVE 161
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI) HSP 1 Score: 200 bits (509), Expect = 4.250e-62 Identity = 106/162 (65.43%), Postives = 123/162 (75.93%), Query Frame = 1
Query: 1 MALAAFAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTT-GRFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPG-EAGYSLTVTSPSDGDTAMAGEVYTVE 477
MA F ALA GML + NAL+V +PS G++VIA+R YTVEWTGT++ RFEIDLYYC S CMED CGDWVTALCPYG DGCPD+ GDYDI+MPEPMSGTS SGYKV V + DE D CSD+F L+AS++AP G E G +L VTSP+ GD A YTVE
Sbjct: 2 MARTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVE 163
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 200 bits (509), Expect = 6.730e-62 Identity = 103/157 (65.61%), Postives = 121/157 (77.07%), Query Frame = 1
Query: 16 FAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTTG-RFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPGEAGYS-LTVTSPSDGDTAMAGEVYTVE 477
F ALA GML +ALEVV+P+ G V++ RAYTVEW+GT + RFEIDLYYC+S CMED CG+WVTALCPYG DGCPD+ GDYDI+MPEPMSGTS SGYKV V + +DE CSD+F L+A DAP +AG +TVTSPS GD+A AGE YTVE
Sbjct: 7 FVALACGMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVE 163
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.890e-60 Identity = 93/126 (73.81%), Postives = 107/126 (84.92%), Query Frame = 1
Query: 1 MALAAFAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTTGRFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLVAS 378
MA AFAALAFGML +VNALEV SP+ G ++A + TVEWTGT++GRF+IDLYYC S CMED CGDWVTALCPYG DGCPD+ GDYD++MPEPM GTSSGYKVMV ++ DESDMGCS +FTLVAS
Sbjct: 1 MARTAFAALAFGMLGAVNALEVTSPAAGDMIVAASSTTVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSGYKVMVTDSSDESDMGCSGEFTLVAS 126
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 196 bits (499), Expect = 2.880e-60 Identity = 103/157 (65.61%), Postives = 120/157 (76.43%), Query Frame = 1
Query: 16 FAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTT-GRFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPG-EAGYSLTVTSPSDGDTAMAGEVYTVE 477
F ALA GML + NAL+V +PS G++VIA+R YTVEWTGT++ RFEIDLYYC S CMED CGDWVTALCPYG DGCPD+ GDYDI+MPEPM GTS SGYKV V + DE D CSD+F L+AS++AP G E G +L VTSP+ GD A YTVE
Sbjct: 6 FVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVE 162
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 195 bits (495), Expect = 1.470e-59 Identity = 99/150 (66.00%), Postives = 117/150 (78.00%), Query Frame = 1
Query: 37 MLSSVNALEVVSPSGGISVIAERAYTVEWTGT-TTGRFEIDLYYCHSFCMEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPGEAGYS-LTVTSPSDGDTAMAGEVYTVE 477
ML + +ALEVV+P+ G V+A RAYTVEWTGT + R+EIDLYYC S CMED CGDWVTALCPYG DGCPD+ GDYDI+MPEPMSGTS SGYKV V + +D+ CSD+F L+A +AP G+AG +TVTSPS GD+A AGE YTVE
Sbjct: 1 MLGAASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVE 150
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Match: A0A6H5KR87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR87_9PHAE) HSP 1 Score: 172 bits (437), Expect = 7.710e-52 Identity = 82/99 (82.83%), Postives = 87/99 (87.88%), Query Frame = 1
Query: 181 MEDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLVASTDAPEPGEAGYSLTVTSPSDGDTAMAGEVYTVE 477
MED CGDWVTALCPYGADGCPD+ GDYDI+MPEPM GTSSGYK+MV ++ DES MGCS DFTLVASTDAP GE GYSLTV SPSDGD AMAGEVYTVE
Sbjct: 1 MEDDCGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKIMVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVNSPSDGDIAMAGEVYTVE 99 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11071.936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11071.936.1 >prot_Ecto-sp13_S_contig11071.936.1 ID=prot_Ecto-sp13_S_contig11071.936.1|Name=mRNA_Ecto-sp13_S_contig11071.936.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=164bp MALAAFAALAFGMLSSVNALEVVSPSGGISVIAERAYTVEWTGTTTGRFEback to top mRNA from alignment at Ecto-sp13_S_contig11071:308..5548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11071.936.1 ID=mRNA_Ecto-sp13_S_contig11071.936.1|Name=mRNA_Ecto-sp13_S_contig11071.936.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5241bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11071:308..5548+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11071:308..5548+ >mRNA_Ecto-sp13_S_contig11071.936.1 ID=mRNA_Ecto-sp13_S_contig11071.936.1|Name=mRNA_Ecto-sp13_S_contig11071.936.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=492bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11071:308..5548+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |