mRNA_Ecto-sp13_S_contig11061.931.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: D7FXY4_ECTSI (Repressor of RNA polymerase III transcription n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY4_ECTSI) HSP 1 Score: 221 bits (562), Expect = 1.890e-69 Identity = 151/157 (96.18%), Postives = 151/157 (96.18%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKV 471
MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKV
Sbjct: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGA-AFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKV 156
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: A0A7R9U9D7_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9D7_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.110e-26 Identity = 64/157 (40.76%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKV 471
MKYL++PRLA+++N L E+GD +L R +AFSCK+AGDDKRLS++L+RQL L T +S SP G L++ R L+DLI TMNASFPDYDFS +RP+ F KE+ +S V N +
Sbjct: 1 MKYLEDPRLAHYTNLLSDFEMGDIVLDGRVEAFSCKRAGDDKRLSRKLDRQLKQELATSPKSP---------------------------------------AESP-LGPLSESSTRNLLIDLIITMNASFPDYDFSSLRPEQFLKESHLSFVVNDI 117
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: A0A7S2B0Q0_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B0Q0_9STRA) HSP 1 Score: 107 bits (268), Expect = 8.470e-26 Identity = 65/157 (41.40%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKV 471
MK+L++P+L ++FL + E+GDR+L+ R +AFSCK+AG+DKRLSK LE+Q L A G+SP G L+D G RR L+DLI TMNASFPD+DFS VRP+ F KE VSLV + +
Sbjct: 1 MKFLEQPQLEMLTSFLSNREIGDRILNGRIEAFSCKRAGEDKRLSKMLEQQYVDEL---------------------------------------ACSPTALGSSP-LGPLSDSGTRRLLIDLISTMNASFPDHDFSSVRPEQFLKEQHVSLVMSNI 117
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: F0YN32_AURAN (Repressor of RNA polymerase III transcription n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN32_AURAN) HSP 1 Score: 95.1 bits (235), Expect = 4.810e-21 Identity = 60/153 (39.22%), Postives = 78/153 (50.98%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLV 459
MK L+ RL+ + FL LGDR++ R +AFSCK+AGDDK+LSK+LE+Q + L T S S T+ GVL+ RR L+DLI TMNASFPD+DFS +RP+ F +EAS V
Sbjct: 1 MKLLENNRLSALTAFLTERSLGDRVIDGRVEAFSCKRAGDDKKLSKQLEKQYADEL-TSSPGS--------------------------------------LDTTSPLGVLSASSTRRLLIDLISTMNASFPDHDFSALRPEQFCREASADFV 114
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: A0A8J2SMK1_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMK1_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 8.370e-20 Identity = 57/153 (37.25%), Postives = 75/153 (49.02%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLV 459
MK L+ PRL+ + FL LG+R+L R +AFSCK+AG+DK+L+KELE Q +A SR+S + S G L RR LVDLI T+NASFPD+DFS +RP+ F +EA
Sbjct: 1 MKLLENPRLSALTAFLSQRRLGERVLDGRVEAFSCKRAGEDKKLAKELEAQFAAE----SRNSPS-----------------------------------SMEASSPLGALAQPATRRLLVDLIATLNASFPDHDFSNLRPEQFCREAGAQFA 114
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: F0WSG5_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSG5_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.810e-19 Identity = 54/157 (34.39%), Postives = 76/157 (48.41%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKV 471
MKYL+E L + ++ L S ++GDR+++ R +AFSCKK DK+L+K LE + S ++ S G L DV R+ L+DLI TMNA+FPDYDFSGVR + F KE S + N++
Sbjct: 1 MKYLEEKELVWLNSLLSSYDIGDRVINGRIEAFSCKKTNSDKKLAKSLESHYQQEISETHYSPCAFDNSDNVEHNASEKLKDTKFDLSKSYTRILP-------SAQSIGALRDVATRKLLIDLITTMNATFPDYDFSGVRIEQFYKERSSQIALNRL 150
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: A0A1V9Z321_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z321_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.610e-19 Identity = 58/157 (36.94%), Postives = 77/157 (49.04%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKV 471
MKYLDEP L + + + V +GDR+++ R +AFSCKKAG DK+L+K LE +A TP + S G L D R+ L++LI TMNASFPDYDFS ++P+ F KE + LV N V
Sbjct: 1 MKYLDEPTLDWANAAMSEVSVGDRVINGRLEAFSCKKAGADKKLAKSLE---AAYQQTPDVGAN------------------------------------------SIGSLADSNTRKLLINLISTMNASFPDYDFSDLKPEQFHKEVDLRLVVNGV 112
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: A0A7S3K2N1_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2N1_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.690e-19 Identity = 55/160 (34.38%), Postives = 79/160 (49.38%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKVRRR 480
MK L+ PRLA + FL ++ +R+++ R +AFSCK+AG+DK+LSK++E+Q + + S G SP G LT+ RR +DLI T+NASFPDYDF+ + P+ F KE S LV + R
Sbjct: 1 MKLLENPRLAALTAFLTERQVSERIITARIEAFSCKRAGEDKKLSKKMEQQFVEEMASSPGS---------------------------------------MGYSP-LGALTEATTRRLFIDLISTLNASFPDYDFTCLSPEQFTKELSPELVVRNINTR 120
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: M4BLB2_HYAAE (Repressor of RNA polymerase III transcription n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLB2_HYAAE) HSP 1 Score: 89.7 bits (221), Expect = 6.740e-19 Identity = 59/152 (38.82%), Postives = 76/152 (50.00%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELER------QLSASLPTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDK 438
MKYL+EP+L++ + L S LGDR+L+ + + +SCKKAG DKRL+K+LE +LS+S P SS +S S G L R+ L+ LI TMNASFPDYDFS VRPD F K
Sbjct: 1 MKYLEEPQLSWLNAVLGSYNLGDRVLTGKLETYSCKKAGSDKRLAKQLELSYQQEIELSSSDTRPLTSS----------------------------------------SSSSLGPLAAAATRKLLITLISTMNASFPDYDFSAVRPDQFCK 112
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Match: A0A812TW74_SYMMI (Maf1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TW74_SYMMI) HSP 1 Score: 88.2 bits (217), Expect = 9.700e-19 Identity = 59/159 (37.11%), Postives = 76/159 (47.80%), Query Frame = 1
Query: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASL----PTPSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRN 465
MKYL+ P L SNFL E+G +L R +AFSCK+AG+DK+LSK LE +L L P RS+ S G L++V RR L+DLI T+NASFPDYDFS PDSF + +++N
Sbjct: 1 MKYLENPGLEAMSNFLTGREMGGCILDGRIEAFSCKRAGEDKKLSKVLEAKLVEDLTMDPPVRKRST-------------------------------------------SLGDLSEVSTRRLLIDLISTLNASFPDYDFSTATPDSFVQRDLKFMLQN 116 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11061.931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11061.931.1 >prot_Ecto-sp13_S_contig11061.931.1 ID=prot_Ecto-sp13_S_contig11061.931.1|Name=mRNA_Ecto-sp13_S_contig11061.931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERback to top mRNA from alignment at Ecto-sp13_S_contig11061:29..2900- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11061.931.1 ID=mRNA_Ecto-sp13_S_contig11061.931.1|Name=mRNA_Ecto-sp13_S_contig11061.931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2872bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11061:29..2900- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11061:29..2900- >mRNA_Ecto-sp13_S_contig11061.931.1 ID=mRNA_Ecto-sp13_S_contig11061.931.1|Name=mRNA_Ecto-sp13_S_contig11061.931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11061:29..2900- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |