mRNA_Ecto-sp13_S_contig11048.920.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: D7G272_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G272_ECTSI) HSP 1 Score: 426 bits (1095), Expect = 2.560e-148 Identity = 207/218 (94.95%), Postives = 209/218 (95.87%), Query Frame = 1
Query: 1 RANGEPRRPYLPLGPRDTFPFVSDDRRPLASRRSLFFNLQQVMPETQGRRGELVETASIYQLKNPGLECATNRPSISPKAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQTYTSLLNFGEGQDLFPQEGPIFDSL 654
RAN EPRRPYLPLGPRDTFPFVSDDRRPLAS RSLFFNLQ V PETQGRRGEL+ETASIYQL NPGLECATNRPSIS AWQELVLDSKFTLCPAGRNPETFRLWEALE GSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYS+AMTQTYTSLLNFGEG DLFPQEGPIFDSL
Sbjct: 156 RANEEPRRPYLPLGPRDTFPFVSDDRRPLASSRSLFFNLQ-VRPETQGRRGELIETASIYQLSNPGLECATNRPSISKTAWQELVLDSKFTLCPAGRNPETFRLWEALEAGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSMAMTQTYTSLLNFGEGHDLFPQEGPIFDSL 372
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: D7G273_ECTSI (Transmembrane protein 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G273_ECTSI) HSP 1 Score: 342 bits (877), Expect = 2.380e-114 Identity = 162/218 (74.31%), Postives = 185/218 (84.86%), Query Frame = 1
Query: 1 RANGEPRRPYLPLGPRDTFPFVSDDRRPLASRRSLFFNLQQVMPETQGRRGELVETASIYQLKNPGLECATNRPSISPKAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQTYTSLLNFGEGQDLFPQEGPIFDSL 654
R +G PR +LPLGPRDTFPFVS+DRRPLAS RSL FNLQ V P+T RR ELV+ AS Y+ NP LECATNRP I+PK WQ+LVLDSKFT+CPAGRNP TFRLWEALEGGSIPIVSKLDFT P +G S TCGDGD+AWN VAASPF + VSVN+W ELP LLDRL++EPD+YINKLQE+CVAW++ AMTQTYTS+LNFGEG DLFPQ+GP+F S+
Sbjct: 216 RTDGLPRNAFLPLGPRDTFPFVSEDRRPLASSRSLLFNLQ-VRPDTSDRRAELVDIASQYESDNPDLECATNRPHINPKEWQDLVLDSKFTICPAGRNPGTFRLWEALEGGSIPIVSKLDFTQPALGALSTQTCGDGDVAWNIVAASPFVEAVSVNDWHELPALLDRLRQEPDDYINKLQEDCVAWHASAMTQTYTSVLNFGEGHDLFPQDGPLFGSV 432
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: A0A6H5K309_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K309_9PHAE) HSP 1 Score: 219 bits (557), Expect = 3.190e-66 Identity = 113/215 (52.56%), Postives = 139/215 (64.65%), Query Frame = 1
Query: 4 ANGEPRRPYLPLGPRDTFPFVSDDRRPLASRRSLFFNLQQVMPETQGRRGELVETASIYQLKNPGLEC-ATNRPSISPKAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNT-TCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQTYTSLLNFGEGQDLFPQEGPI 642
A E R Y+PLGPRD F FVS R AS R + N V PET RR L E S YQ + LE A+ P ++ W++L+L S+FT+ P G NPETFR +EALE GSIPI+SK D+T P + CG GD AWNTVAASPFA+ VSVN W ELP+LLDRL E D ++++LQ +C WY M +TY SLL+FG+G DL+PQ GPI
Sbjct: 195 AEQEQRNAYIPLGPRDNFAFVSASERSPASTRPVLLNFV-VDPETSSRRAHLAEVVSDYQALHTDLEIYASTTPDLNASQWRDLLLRSRFTVSPGGHNPETFRTFEALEAGSIPIISKSDYTDPAFHKEIRVEACGTGDAAWNTVAASPFAQAVSVNTWDELPELLDRLDAETDSFLDRLQADCGEWYDALMNRTYASLLHFGDGLDLWPQAGPI 408
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: D7FHD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD8_ECTSI) HSP 1 Score: 197 bits (502), Expect = 9.800e-59 Identity = 95/176 (53.98%), Postives = 122/176 (69.32%), Query Frame = 1
Query: 121 QVMPETQGRRGELVETASIYQLKNPGLEC-ATNRPSISPKAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNT-TCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQTYTSLLNFGEGQDLFPQEGPI 642
+V PET RR L E S YQ + LE A+ P ++ W++L+L S+FT+ P G NPETFR +EALEGGSIPI+SK D+T P + CG GD AWNTVAASPFA+ VSV+ W +LP+LLDRL EPD ++++LQ +C AWY M +TY SLL+FG+G DL+PQ GPI
Sbjct: 167 EVDPETSSRRARLAEVVSDYQALHADLEIYASTAPDLNASQWRDLLLRSRFTVSPGGHNPETFRTFEALEGGSIPIISKSDYTDPAFHKEIRVEACGTGDAAWNTVAASPFARAVSVDTWEDLPELLDRLHAEPDSFLDRLQADCGAWYDALMNRTYASLLDFGDGLDLWPQAGPI 342
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: A0A2R5GRG6_9STRA (UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRG6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.810e-15 Identity = 64/196 (32.65%), Postives = 94/196 (47.96%), Query Frame = 1
Query: 28 YLPLGPRDTFPFVSDDRRPLASRRSLFFNLQQVMPETQGRRGELVETASIYQLKNPGLECATNRPS---------ISPKAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQTYT 588
YLPLGPR+ F V + L R FN + T R LV+ K P ++ I+P ++++++DS FTLCP G NPE +R++EA E GSIPIV ++ + C + T A PF V +N+W ELP L+ + + P E I ++Q + + WYS MT+ T
Sbjct: 371 YLPLGPREEFKRVYANDVRLVRERKYKFNFMGSL--TSLSRKVLVKELGPSSEKYPSFVWVVSKWKKQLTRANGYITPVEYKQILVDSVFTLCPQGHNPEAYRIYEACEAGSIPIVVLDEYYR-------SHECEGAFLPLITQGA-PF---VFLNSWTELPAYLEYILQHP-ERIQQMQMDTMEWYSKFMTKVAT 552
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: A0A7S2SIR8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIR8_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.620e-14 Identity = 65/220 (29.55%), Postives = 94/220 (42.73%), Query Frame = 1
Query: 28 YLPLGPRDTFPFVSDDRRPLASRRSLFFNLQQVMPETQGRRGELVETASIYQLKNPGLECATNRPSISP----------KAW-------------------QELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTV--AASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQTYTSL 594
YLPLGPR F V +R FN+ + ET R L + +PG+E + S P K W +E++LDS FTLCP G NPET+RL+EA E GSIPIV + + GD W + +PF + V +W + ++L L+ +P + +LQ + +WY MT T++
Sbjct: 296 YLPLGPRSEFQAVKAQDVKQPPKRQYLFNMMVTL-ETNHNRTRLHWAVMRLKWADPGIEEVKSSSSTLPPITACFIHNAKRWSGSLPSEVSKDKAMPAGHYREVLLDSVFTLCPNGHNPETYRLFEAAEAGSIPIVEET------------LSSGDCLNPWRPFKDSGAPF---IWVTDWSTIGEVLKELRADPSR-VQRLQSDLRSWYVSFMTTAITNV 498
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: A0A7S2SHX6_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHX6_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.320e-12 Identity = 66/210 (31.43%), Postives = 105/210 (50.00%), Query Frame = 1
Query: 28 YLPLGPRDTFPFVSDD-RRPLASRRSLF------------FNLQQVMPETQGRR---GELVETASIYQLKNPG-------LECATNRP-------SISPKAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNT--VAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWY 561
YLPL PR F V+D+ R+P+ SR+ LF +L + + E Q + G ++AS L G + TN P ++ +++++LDS FTL P+G NPETFRL+EA E GSIPIV D++ T G+ W ++ +PF V V++W ++ +L+ L +P I ++Q++ + WY
Sbjct: 202 YLPLSPRFEFEMVTDEERKPVTSRKYLFNMMMSLSTNQIRIDLDKKVKELQVQYPGGGTNADSASGGSLPGLGQSFIHNAMTWQTNLPKEVIDGQAMPADEYRQVLLDSVFTLSPSGHNPETFRLFEAAEAGSIPIV---DYS---------TRSGNCKNPWRPFKMSQAPF---VWVDDWTDIQHILEDLISDPARVI-QMQKDLMEWY 395
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: A0A2R5G5S0_9STRA (UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S0_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 7.250e-12 Identity = 55/199 (27.64%), Postives = 93/199 (46.73%), Query Frame = 1
Query: 28 YLPLGPRDTFPFVSDDRR-PLASRRSLFFN------------LQQVMPETQGRRGELVETASIYQLKNPGLECATNRPSISPKAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTV--AASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQ 579
Y PLGPR F V P A +R N L+ L +++ I+ + + I+PK ++E++LDSKFTLCP G NPE +R++EA E GS+P++ + + N C + A+ + + +PF V +++W +LP LL+ + ++ + Q AWY+ M++
Sbjct: 300 YFPLGPRAEFERVDQTTGVPAARKRQYAINFVGSPTSIPRRKLRDYFQSETWTMNPLAKSSYIHVTDTWTQTVSVEKGYITPKQYREVLLDSKFTLCPMGHNPEAYRIYEACEAGSVPVLVTKEEEYV------NHKCSN---AFQPLLDSGAPF---VILDSWNDLPQLLEIIHSN-QTFVEEKQRAVRAWYAEYMSK 485
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: A0A7S4FT24_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FT24_9EUGL) HSP 1 Score: 68.2 bits (165), Expect = 9.070e-10 Identity = 48/150 (32.00%), Postives = 73/150 (48.67%), Query Frame = 1
Query: 169 ASIYQLKNPGLECATN------RPSISPKAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQTYTSLLN 600
A + L+ G+ C TN + + P ++ + SKFTLCP G NPET RL+EALE GSIP+ K D D VA P ++ W +LP+L DR ++P + +++LQ + V+W+ +T + N
Sbjct: 324 AVLNMLEQRGIRCYTNVNKWEGKGARDPIIYRFALEQSKFTLCPWGNNPETMRLYEALETGSIPVSQKWK---------------DADFD-PLVALGPGHPLPVLDTWGQLPELFDRY-KDPAK-LDELQAQVVSWWIRRRDAIFTGVRN 455
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Match: A0A7S2KHJ8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KHJ8_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.040e-9 Identity = 62/209 (29.67%), Postives = 91/209 (43.54%), Query Frame = 1
Query: 28 YLPLGPR----DTFPFVSDDRRPL---ASRRSLFFNLQQVMPETQGRRGELVETASIYQLKNPGLECATNRPSISP----------KAWQELVLDSKFTLCPAGRNPETFRLWEALEGGSIPIVSKLDFTHPVVGTKSNTTCGDGDIAWNTVAASPFAKQVSVNNWLELPDLLDRLQREPDEYINKLQEECVAWYSLAMTQTYTSLLNF 603
YLPLGPR D + + + + +S+R FN T R L + + E T+ P K++ +++L+S FTL PAG NPE FRL+EA+E GSIP++S LD + C D W SP V V +W E + +L EP E ++K Q + WY+ M+ +F
Sbjct: 842 YLPLGPRKDSWDAYQMLMNQNGSVIAASSQRKYAFNAI-FTKSTHAGRSILADVLQMDGNSLSSFEQITDTWQPDPNKNSNDLLDSKSYMKVLLESTFTLAPAGHNPECFRLYEAVEAGSIPVIS-LDKDY------KQHKCKDSLSHW---LDSPI---VIVESWNEAIPTMQKLLEEP-EALDKRQADLHVWYNQYMSSAVHDFESF 1035 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11048.920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11048.920.1 >prot_Ecto-sp13_S_contig11048.920.1 ID=prot_Ecto-sp13_S_contig11048.920.1|Name=mRNA_Ecto-sp13_S_contig11048.920.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp RANGEPRRPYLPLGPRDTFPFVSDDRRPLASRRSLFFNLQQVMPETQGRRback to top mRNA from alignment at Ecto-sp13_S_contig11048:2823..5180- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11048.920.1 ID=mRNA_Ecto-sp13_S_contig11048.920.1|Name=mRNA_Ecto-sp13_S_contig11048.920.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2358bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11048:2823..5180- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11048:2823..5180- >mRNA_Ecto-sp13_S_contig11048.920.1 ID=mRNA_Ecto-sp13_S_contig11048.920.1|Name=mRNA_Ecto-sp13_S_contig11048.920.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=657bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11048:2823..5180- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |