mRNA_Ecto-sp13_S_contig11033.915.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5L586_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L586_9PHAE) HSP 1 Score: 362 bits (928), Expect = 6.400e-123 Identity = 190/205 (92.68%), Postives = 195/205 (95.12%), Query Frame = 3
Query: 459 ACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE 1073
A VYVPAVLKAKLEAVQTEG TLEDV+EEVV CAGEGAILSTAKSTRCRDGATDRVDMKKLICTRG KSRQLEYEASLDTAPGVQRRNVKGSARTG PFEV+VRHAKSHRWPRISNMKLTHNHSVDRKAIDVK RLASKLTEEQLGQVKQM SH MKPKEVTK++KA+HEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE
Sbjct: 6 AAMVYVPAVLKAKLEAVQTEGKTLEDVEEEVVSWCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKAIHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE 210
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE) HSP 1 Score: 315 bits (807), Expect = 4.940e-97 Identity = 168/187 (89.84%), Postives = 173/187 (92.51%), Query Frame = 3
Query: 516 EGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
EG TLEDV+EEVVRLC GEGAILSTAKSTRCRDGATDRVDMKKLICTRG KSRQLEYEASLDTAPGVQRRNVK SART P VRHAKSHRWPRISNMKLTHNHSVDRKAIDVK RLASKLTEEQLGQV+QM SH MKPKEVTK++K +HEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV
Sbjct: 78 EGKTLEDVEEEVVRLCVGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKRSARTDCP----VRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVQQMTSHGMKPKEVTKAMKVLHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 260
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JK57_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK57_9PHAE) HSP 1 Score: 287 bits (735), Expect = 1.860e-91 Identity = 156/203 (76.85%), Postives = 172/203 (84.73%), Query Frame = 3
Query: 468 VYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
VY PAVLK KLEAVQTEG LEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRG SRQLE+EA LDT PGV RRN KGSARTG FEV+VRHAKSH P+I+NMKL HNH VDR+A+ VK RLA KLTEEQ GQV++M S MKPK V ++I+A+HEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEV
Sbjct: 12 VYDPAVLKTKLEAVQTEGKILEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEV 214
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JAS6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS6_9PHAE) HSP 1 Score: 279 bits (714), Expect = 2.130e-86 Identity = 151/203 (74.38%), Postives = 170/203 (83.74%), Query Frame = 3
Query: 468 VYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
VY PA+L +LEAVQTEG LEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRG SRQLE+EA LDT PGV RRN KGSARTG FEV+VRHA SH P+I+N+KL HNH VDR+A+ VK RLA KLTEEQ GQV++M S MKPK V ++I+A+HEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEV
Sbjct: 12 VYDPALLTTELEAVQTEGKILEDVVEEVVRTCAFEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHANSHPRPKITNIKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEV 214
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE) HSP 1 Score: 284 bits (726), Expect = 6.150e-86 Identity = 157/207 (75.85%), Postives = 173/207 (83.57%), Query Frame = 3
Query: 468 VYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHE----MKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
VY AVLK KLEAVQTEG TLEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRG SRQLE+EA LDT PGV RRN KGSARTG FEV+VRHAKSH P+I+NMKL HNH VDR+A+ VK RLA KLTEEQ GQV++M S E MKPK V ++I+A+HEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEV
Sbjct: 12 VYDSAVLKTKLEAVQTEGKTLEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSEEIERGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEV 218
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JDU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU5_9PHAE) HSP 1 Score: 266 bits (680), Expect = 5.350e-85 Identity = 172/292 (58.90%), Postives = 182/292 (62.33%), Query Frame = 3
Query: 183 LPLGTPLPV--GAPDAGAAGGFAGYPAQAHPVQQXXXXXLTTSPPSETQVITPVVLHPHARRGGCDGLGQRRHACVGLGVPTRIFILCDLPAAFACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRD 1052
LP LP GA DAGAAG FAGYP QAHPVQQXXXXX ETQV YVPAVLKA LEAVQTEG TLEDV+EEVVRLCAGEGAILSTAKST SLDTAPGV RRNVKGSARTG PFEV+VRHAK+HRWP+ISNMKL HNHSVDR AIDV+ RLASKLTEEQLGQVKQM SH MKPKEVTK++KA+HED DIDINKRAVQNAAATV + R+
Sbjct: 2 LPCSAALPASYGARDAGAAGAFAGYPVQAHPVQQXXXXXXXXXXXXETQV------------------------------------------------YVPAVLKANLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKST------------------------------SLDTAPGVLRRNVKGSARTGCPFEVSVRHAKTHRWPKISNMKLKHNHSVDRNAIDVQVRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVRTGRRSRE 215
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5KZF1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF1_9PHAE) HSP 1 Score: 260 bits (665), Expect = 2.890e-78 Identity = 162/282 (57.45%), Postives = 181/282 (64.18%), Query Frame = 3
Query: 231 AGGFAGYPAQAHPVQQXXXXXLTTSPPSETQVITPVVLHPHARRGGCDGLGQRRHACVGLGVPTRIFILCDLPAAFACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
AG FAGYP QAHP QQXXXXX ETQV PAV+K KLEAV TEG T EDV EEVVR C GEGAILSTAKSTRCRDGATDRVD+KKLICTRG RQLEYEA LDT V++RHA++H+WP+ISNMKL HNH V+R+AIDVK RLA KLTEE+ GQV++M S MKPK VT+++KA+HEDSD+DINKRAVQNAAA+VHGAEKP DAADAYEEV
Sbjct: 30 AGVFAGYPVQAHPAQQXXXXXXXXXXXXETQVNN------------------------------------------------PAVVKTKLEAVPTEGKTPEDVVEEVVRTCTGEGAILSTAKSTRCRDGATDRVDIKKLICTRGGGCRQLEYEARLDTRL------------------VSIRHARTHQWPKISNMKLEHNHVVNREAIDVKLRLAGKLTEERRGQVEKMISKGMKPKAVTEAMKALHEDSDVDINKRAVQNAAASVHGAEKPGDAADAYEEV 245
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5KWS5_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS5_9PHAE) HSP 1 Score: 243 bits (621), Expect = 6.710e-77 Identity = 124/131 (94.66%), Postives = 125/131 (95.42%), Query Frame = 3
Query: 468 VYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV 860
VYVPAVLKAKLEAVQTEG TLEDV+EEVV LCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRG KSRQ EYE SLDTAPGVQRRNVKGSARTG PFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV
Sbjct: 47 VYVPAVLKAKLEAVQTEGRTLEDVEEEVVSLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQAEYETSLDTAPGVQRRNVKGSARTGCPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV 177
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JGR0_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR0_9PHAE) HSP 1 Score: 242 bits (617), Expect = 5.360e-73 Identity = 138/198 (69.70%), Postives = 149/198 (75.25%), Query Frame = 3
Query: 327 ITPVVLHPHARRGG----CDGLGQRRHA--CVGLGVPTRIF---ILCD--------LPAAFACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPR 869
+T V P +RRG C G+ R C G+ F ++C LP VYVPAV+KAKLEAVQTEG TL+DV+EEVV LCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRG KSR LEYEASLDTAPGVQRRNVKGSARTG PFEV+VRHAKSHRWPRISNMKLTHNHSVDR+AIDVK R
Sbjct: 215 LTSCVYPPCSRRGTRGLPCGGVIARNAPIQCCSAGLLRPCFHLALVCRWELRPLWVLPMLGPPEVYVPAVVKAKLEAVQTEGRTLKDVEEEVVSLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRHLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDREAIDVKLR 412
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5L5Y4_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y4_9PHAE) HSP 1 Score: 226 bits (575), Expect = 1.730e-69 Identity = 117/134 (87.31%), Postives = 122/134 (91.04%), Query Frame = 3
Query: 459 ACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV 860
A S YV AVLKAKLEAVQTEG TLEDV+EEV R CAGEGAILSTAKSTRCRDGATDRV M+KLIC+RG KSRQLEYEASLDTAPGV RRNVKGSARTG PFEV+VRHAKSHRWP+ISNMKL HNHSVDR AIDV
Sbjct: 75 ARSEYVLAVLKAKLEAVQTEGKTLEDVEEEVARWCAGEGAILSTAKSTRCRDGATDRVGMRKLICSRGGKSRQLEYEASLDTAPGVLRRNVKGSARTGCPFEVSVRHAKSHRWPKISNMKLKHNHSVDRNAIDV 208 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11033.915.1 >prot_Ecto-sp13_S_contig11033.915.1 ID=prot_Ecto-sp13_S_contig11033.915.1|Name=mRNA_Ecto-sp13_S_contig11033.915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp MLSPCTGLPLGTPLPVGAPDAGAAGGFAGYPAQAHPVQQQQQQTLTTSPPback to top mRNA from alignment at Ecto-sp13_S_contig11033:334..2431- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11033.915.1 ID=mRNA_Ecto-sp13_S_contig11033.915.1|Name=mRNA_Ecto-sp13_S_contig11033.915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2098bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11033:334..2431- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11033:334..2431- >mRNA_Ecto-sp13_S_contig11033.915.1 ID=mRNA_Ecto-sp13_S_contig11033.915.1|Name=mRNA_Ecto-sp13_S_contig11033.915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11033:334..2431- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |