mRNA_Ecto-sp13_S_contig11033.915.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11033.915.1
Unique NamemRNA_Ecto-sp13_S_contig11033.915.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5L586_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L586_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 6.400e-123
Identity = 190/205 (92.68%), Postives = 195/205 (95.12%), Query Frame = 3
Query:  459 ACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE 1073
            A  VYVPAVLKAKLEAVQTEG TLEDV+EEVV  CAGEGAILSTAKSTRCRDGATDRVDMKKLICTRG KSRQLEYEASLDTAPGVQRRNVKGSARTG PFEV+VRHAKSHRWPRISNMKLTHNHSVDRKAIDVK RLASKLTEEQLGQVKQM SH MKPKEVTK++KA+HEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE
Sbjct:    6 AAMVYVPAVLKAKLEAVQTEGKTLEDVEEEVVSWCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKAIHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE 210          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 4.940e-97
Identity = 168/187 (89.84%), Postives = 173/187 (92.51%), Query Frame = 3
Query:  516 EGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
            EG TLEDV+EEVVRLC GEGAILSTAKSTRCRDGATDRVDMKKLICTRG KSRQLEYEASLDTAPGVQRRNVK SART  P    VRHAKSHRWPRISNMKLTHNHSVDRKAIDVK RLASKLTEEQLGQV+QM SH MKPKEVTK++K +HEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV
Sbjct:   78 EGKTLEDVEEEVVRLCVGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKRSARTDCP----VRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVQQMTSHGMKPKEVTKAMKVLHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 260          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JK57_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK57_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 1.860e-91
Identity = 156/203 (76.85%), Postives = 172/203 (84.73%), Query Frame = 3
Query:  468 VYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
            VY PAVLK KLEAVQTEG  LEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRG  SRQLE+EA LDT PGV RRN KGSARTG  FEV+VRHAKSH  P+I+NMKL HNH VDR+A+ VK RLA KLTEEQ GQV++M S  MKPK V ++I+A+HEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEV
Sbjct:   12 VYDPAVLKTKLEAVQTEGKILEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEV 214          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JAS6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS6_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 2.130e-86
Identity = 151/203 (74.38%), Postives = 170/203 (83.74%), Query Frame = 3
Query:  468 VYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
            VY PA+L  +LEAVQTEG  LEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRG  SRQLE+EA LDT PGV RRN KGSARTG  FEV+VRHA SH  P+I+N+KL HNH VDR+A+ VK RLA KLTEEQ GQV++M S  MKPK V ++I+A+HEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEV
Sbjct:   12 VYDPALLTTELEAVQTEGKILEDVVEEVVRTCAFEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHANSHPRPKITNIKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEV 214          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 6.150e-86
Identity = 157/207 (75.85%), Postives = 173/207 (83.57%), Query Frame = 3
Query:  468 VYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHE----MKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
            VY  AVLK KLEAVQTEG TLEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRG  SRQLE+EA LDT PGV RRN KGSARTG  FEV+VRHAKSH  P+I+NMKL HNH VDR+A+ VK RLA KLTEEQ GQV++M S E    MKPK V ++I+A+HEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEV
Sbjct:   12 VYDSAVLKTKLEAVQTEGKTLEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSEEIERGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEV 218          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JDU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU5_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 5.350e-85
Identity = 172/292 (58.90%), Postives = 182/292 (62.33%), Query Frame = 3
Query:  183 LPLGTPLPV--GAPDAGAAGGFAGYPAQAHPVQQXXXXXLTTSPPSETQVITPVVLHPHARRGGCDGLGQRRHACVGLGVPTRIFILCDLPAAFACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRD 1052
            LP    LP   GA DAGAAG FAGYP QAHPVQQXXXXX       ETQV                                                YVPAVLKA LEAVQTEG TLEDV+EEVVRLCAGEGAILSTAKST                              SLDTAPGV RRNVKGSARTG PFEV+VRHAK+HRWP+ISNMKL HNHSVDR AIDV+ RLASKLTEEQLGQVKQM SH MKPKEVTK++KA+HED DIDINKRAVQNAAATV    + R+
Sbjct:    2 LPCSAALPASYGARDAGAAGAFAGYPVQAHPVQQXXXXXXXXXXXXETQV------------------------------------------------YVPAVLKANLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKST------------------------------SLDTAPGVLRRNVKGSARTGCPFEVSVRHAKTHRWPKISNMKLKHNHSVDRNAIDVQVRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVRTGRRSRE 215          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5KZF1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF1_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 2.890e-78
Identity = 162/282 (57.45%), Postives = 181/282 (64.18%), Query Frame = 3
Query:  231 AGGFAGYPAQAHPVQQXXXXXLTTSPPSETQVITPVVLHPHARRGGCDGLGQRRHACVGLGVPTRIFILCDLPAAFACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVKQMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEV 1076
            AG FAGYP QAHP QQXXXXX       ETQV                                                  PAV+K KLEAV TEG T EDV EEVVR C GEGAILSTAKSTRCRDGATDRVD+KKLICTRG   RQLEYEA LDT                    V++RHA++H+WP+ISNMKL HNH V+R+AIDVK RLA KLTEE+ GQV++M S  MKPK VT+++KA+HEDSD+DINKRAVQNAAA+VHGAEKP DAADAYEEV
Sbjct:   30 AGVFAGYPVQAHPAQQXXXXXXXXXXXXETQVNN------------------------------------------------PAVVKTKLEAVPTEGKTPEDVVEEVVRTCTGEGAILSTAKSTRCRDGATDRVDIKKLICTRGGGCRQLEYEARLDTRL------------------VSIRHARTHQWPKISNMKLEHNHVVNREAIDVKLRLAGKLTEERRGQVEKMISKGMKPKAVTEAMKALHEDSDVDINKRAVQNAAASVHGAEKPGDAADAYEEV 245          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5KWS5_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS5_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 6.710e-77
Identity = 124/131 (94.66%), Postives = 125/131 (95.42%), Query Frame = 3
Query:  468 VYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV 860
            VYVPAVLKAKLEAVQTEG TLEDV+EEVV LCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRG KSRQ EYE SLDTAPGVQRRNVKGSARTG PFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV
Sbjct:   47 VYVPAVLKAKLEAVQTEGRTLEDVEEEVVSLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQAEYETSLDTAPGVQRRNVKGSARTGCPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV 177          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5JGR0_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR0_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 5.360e-73
Identity = 138/198 (69.70%), Postives = 149/198 (75.25%), Query Frame = 3
Query:  327 ITPVVLHPHARRGG----CDGLGQRRHA--CVGLGVPTRIF---ILCD--------LPAAFACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPR 869
            +T  V  P +RRG     C G+  R     C   G+    F   ++C         LP      VYVPAV+KAKLEAVQTEG TL+DV+EEVV LCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRG KSR LEYEASLDTAPGVQRRNVKGSARTG PFEV+VRHAKSHRWPRISNMKLTHNHSVDR+AIDVK R
Sbjct:  215 LTSCVYPPCSRRGTRGLPCGGVIARNAPIQCCSAGLLRPCFHLALVCRWELRPLWVLPMLGPPEVYVPAVVKAKLEAVQTEGRTLKDVEEEVVSLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRHLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDREAIDVKLR 412          
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Match: A0A6H5L5Y4_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y4_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 1.730e-69
Identity = 117/134 (87.31%), Postives = 122/134 (91.04%), Query Frame = 3
Query:  459 ACSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV 860
            A S YV AVLKAKLEAVQTEG TLEDV+EEV R CAGEGAILSTAKSTRCRDGATDRV M+KLIC+RG KSRQLEYEASLDTAPGV RRNVKGSARTG PFEV+VRHAKSHRWP+ISNMKL HNHSVDR AIDV
Sbjct:   75 ARSEYVLAVLKAKLEAVQTEGKTLEDVEEEVARWCAGEGAILSTAKSTRCRDGATDRVGMRKLICSRGGKSRQLEYEASLDTAPGVLRRNVKGSARTGCPFEVSVRHAKSHRWPKISNMKLKHNHSVDRNAIDV 208          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11033.915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5L586_9PHAE6.400e-12392.68FAR1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JUZ2_9PHAE4.940e-9789.84SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JK57_9PHAE1.860e-9176.85MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JAS6_9PHAE2.130e-8674.38MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNB0_9PHAE6.150e-8675.85SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JDU5_9PHAE5.350e-8558.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZF1_9PHAE2.890e-7857.45MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KWS5_9PHAE6.710e-7794.66FAR1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JGR0_9PHAE5.360e-7369.70FAR1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L5Y4_9PHAE1.730e-6987.31FAR1 domain-containing protein n=1 Tax=Ectocarpus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11033contigEcto-sp13_S_contig11033:334..2431 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1094
Hectar predicted targeting categoryother localisation
Exons6
Cds size933
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11033.915.1prot_Ecto-sp13_S_contig11033.915.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11033 334..2027 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462571.9804378-CDS-Ecto-sp13_S_contig11033:333..5061681462571.9804378-CDS-Ecto-sp13_S_contig11033:333..506Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11033 334..506 -
1681462571.9907665-CDS-Ecto-sp13_S_contig11033:703..8601681462571.9907665-CDS-Ecto-sp13_S_contig11033:703..860Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11033 704..860 -
1681462572.000315-CDS-Ecto-sp13_S_contig11033:1115..11741681462572.000315-CDS-Ecto-sp13_S_contig11033:1115..1174Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11033 1116..1174 -
1681462572.0313203-CDS-Ecto-sp13_S_contig11033:1351..15891681462572.0313203-CDS-Ecto-sp13_S_contig11033:1351..1589Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11033 1352..1589 -
1681462572.0699494-CDS-Ecto-sp13_S_contig11033:1721..20271681462572.0699494-CDS-Ecto-sp13_S_contig11033:1721..2027Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11033 1722..2027 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462572.1216087-UTR-Ecto-sp13_S_contig11033:2027..20301681462572.1216087-UTR-Ecto-sp13_S_contig11033:2027..2030Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11033 2028..2030 -
1681462572.139582-UTR-Ecto-sp13_S_contig11033:2273..24311681462572.139582-UTR-Ecto-sp13_S_contig11033:2273..2431Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11033 2274..2431 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11033.915.1

>prot_Ecto-sp13_S_contig11033.915.1 ID=prot_Ecto-sp13_S_contig11033.915.1|Name=mRNA_Ecto-sp13_S_contig11033.915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
MLSPCTGLPLGTPLPVGAPDAGAAGGFAGYPAQAHPVQQQQQQTLTTSPP
SETQVITPVVLHPHARRGGCDGLGQRRHACVGLGVPTRIFILCDLPAAFA
CSVYVPAVLKAKLEAVQTEGNTLEDVKEEVVRLCAGEGAILSTAKSTRCR
DGATDRVDMKKLICTRGRKSRQLEYEASLDTAPGVQRRNVKGSARTGRPF
EVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKPRLASKLTEEQLGQVK
QMKSHEMKPKEVTKSIKAVHEDSDIDINKRAVQNAAATVHGAEKPRDAAD
AYEEVCPCVC*
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mRNA from alignment at Ecto-sp13_S_contig11033:334..2431-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11033.915.1 ID=mRNA_Ecto-sp13_S_contig11033.915.1|Name=mRNA_Ecto-sp13_S_contig11033.915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2098bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11033:334..2431- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTCCATCCAGTGCTGCTCTGCCGGCCTCTTACGGTGCTCGTGATGC TGGCGCTGCGGGAGCTTTTGCGGGCTACTTGTACGAGCCCACCCCGTATA GCAACAACAGCAGCAGATATTGACCACCAGCCCTCCACCGGAAACGCAGG CGAGACGGGTTGATGTTTGACAAGTGTGGTTCGGCGTGACACCGGCAATG TTTGTTCCGTGGGTGTAGCACGCCAATGGATTGTCACTGCCGTGCTGTAC CTCGTGCCTTTGAACGCCTGCACGTACGGTTCGCTGTTTTCGTGTACTCA GCGGTGGACGGCGAAACGTGTCGTTTGTCTTGTCTTGTGATCAAACGTTG ACATGGTGTCCTTCCCTTCCGCCGCGTGGTGGGTTTCGCGTGCGGTTGCA GGCCATGCTTTCACCTTGCACTGGTCTGCCGTTAGGAACTCCGCTCCCTG TGGGTGCTCCCGATGCTGGGGCCGCCGGAGGTTTTGCGGGCTACCCTGCA CAAGCCCACCCCGTACAGCAACAACAGCAGCAGACATTGACCACCAGCCC TCCGTCGGAAACGCAGGTGATAACGCCCGTAGTGTTGCACCCTCATGCAC GACGGGGAGGCTGCGATGGCCTGGGTCAACGACGCCATGCATGTGTTGGT CTGGGTGTACCTACAAGAATTTTCATTCTGTGTGACTTGCCCGCTGCATT CGCCTGCTCGGTGCTGTAGTACAGTAATCCAGTTCGGGTACTTTTGTGCT CGACGCTCGAACATCCCACAGTGCTGTAGAATCGTCCACACCCCGAAGCA CGTGCCGCTGTCTAACCCGTCGTTTCGCGGTTTGAACACTAGGTGTACGT TCCGGCTGTGTTAAAGGCGAAGCTGGAGGCAGTGCAGACGGAGGGAAATA CGCTTGAAGACGTGAAGGAGGAGGTGGTGAGGTTGTGCGCCGGTGAAGGG GCGATCCTTTCTACCGCGAAGTCGACGAGGTGTCGCGACGGCGCAACGGA TCGTGTGGACATGAAGAAGCTGATTTGTACCCGAGGCAGGAAGAGCCGGC AACTGGAGTACGAAGCCAGTCTAGACACCGGTAAGCGTTTCATCCGTGGC ACTTGGGCATACTAGGAGAATGGTTGAGGTGACGAATACGGGGCGAGTCG CGGGCAAGCCTGTTGTTAGCATGCATGCTTCGGTGCAGGTGAATGCATGA CGCACCGCCGATGACACACCGCCTATACTCCGTCTCCCACGTCGTTGCGT GTTGCAGCACCTGGGGTACAACGGCGGAACGTAAAGGGAAGCGCGAGGAC TGGTCGTCCGTTTGAGGTACGTAGCTGGTCTCCCGCGGAACATGTCTTGG TGCAGTGGACGGAGAAAGGGTCCAACAGTTGTCTGAGGTCTTTGAGCGTG AGATTGAAAAAGATGTCCGAACTGCGTATTTAAAATCGGGGAGGGGTCGG TCGGGTGTCTTGTGATCCATGATGCATGTTGTGATCCGTTACACGCGCAC ATATCCCACGTATCCATCGTTTCATTAATCCTCTTCTATCCTTTTGTGGA CCCACCGTTCCGTTATTTTAGGTTAACGTCCGGCACGCGAAGTCCCACAG GTGGCCCAGGATTAGCAACATGAAGCTCACGCACAACCACAGCGTCGACC GCAAGGCCATCGACGTCAAGCCTCGCCTCGCATCAAAACTAACGGAGGAG CAGCTGGGACAAGTGAAGCAGATGAAAAGTGAGAAGATTGAACGCGTTGG AAGTAGGTCTACAGTAGCTCCCGTCGTATCCCACGATTTGTCATGGTTGG TAATCATGATGCCGCATGACGAACGGCCCTTGAAGCGTGGCACTGCTGTC GCCTCCACCTTGTTACCCTCTTTGTCGGTGACACGCCACTTATTTTTGTG CTGCCGGCTCTCCCATACGGCGCAGGTCATGAGATGAAGCCAAAAGAGGT GACAAAATCGATTAAGGCGGTGCACGAGGACAGCGACATCGACATCAACA AGCGCGCGGTGCAGAACGCGGCTGCCACTGTGCACGGGGCGGAGAAGCCG AGAGATGCCGCCGATGCGTACGAAGAGGTGTGTCCATGTGTCTGTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11033:334..2431-

>mRNA_Ecto-sp13_S_contig11033.915.1 ID=mRNA_Ecto-sp13_S_contig11033.915.1|Name=mRNA_Ecto-sp13_S_contig11033.915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11033:334..2431- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTTCACCTTGCACTGGTCTGCCGTTAGGAACTCCGCTCCCTGTGGG
TGCTCCCGATGCTGGGGCCGCCGGAGGTTTTGCGGGCTACCCTGCACAAG
CCCACCCCGTACAGCAACAACAGCAGCAGACATTGACCACCAGCCCTCCG
TCGGAAACGCAGGTGATAACGCCCGTAGTGTTGCACCCTCATGCACGACG
GGGAGGCTGCGATGGCCTGGGTCAACGACGCCATGCATGTGTTGGTCTGG
GTGTACCTACAAGAATTTTCATTCTGTGTGACTTGCCCGCTGCATTCGCC
TGCTCGGTGTACGTTCCGGCTGTGTTAAAGGCGAAGCTGGAGGCAGTGCA
GACGGAGGGAAATACGCTTGAAGACGTGAAGGAGGAGGTGGTGAGGTTGT
GCGCCGGTGAAGGGGCGATCCTTTCTACCGCGAAGTCGACGAGGTGTCGC
GACGGCGCAACGGATCGTGTGGACATGAAGAAGCTGATTTGTACCCGAGG
CAGGAAGAGCCGGCAACTGGAGTACGAAGCCAGTCTAGACACCGCACCTG
GGGTACAACGGCGGAACGTAAAGGGAAGCGCGAGGACTGGTCGTCCGTTT
GAGGTTAACGTCCGGCACGCGAAGTCCCACAGGTGGCCCAGGATTAGCAA
CATGAAGCTCACGCACAACCACAGCGTCGACCGCAAGGCCATCGACGTCA
AGCCTCGCCTCGCATCAAAACTAACGGAGGAGCAGCTGGGACAAGTGAAG
CAGATGAAAAGTCATGAGATGAAGCCAAAAGAGGTGACAAAATCGATTAA
GGCGGTGCACGAGGACAGCGACATCGACATCAACAAGCGCGCGGTGCAGA
ACGCGGCTGCCACTGTGCACGGGGCGGAGAAGCCGAGAGATGCCGCCGAT
GCGTACGAAGAGGTGTGTCCATGTGTCTGTTGA
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