mRNA_Ecto-sp13_S_contig11004.890.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: D8LCM5_ECTSI (Mitochondrial Processing Peptidase beta subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM5_ECTSI) HSP 1 Score: 627 bits (1617), Expect = 4.330e-224 Identity = 321/331 (96.98%), Postives = 326/331 (98.49%), Query Frame = 1
Query: 1 ATQATNLSAESLQAAKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
A +AT+LSAESLQA+KGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQG LTDMAQTLLGDVAASS AVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDF+WYTLHNLLHIVHKVTDAEVD AKTLLKN+IYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR
Sbjct: 151 AVKATSLSAESLQASKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGSLTDMAQTLLGDVAASSSSAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFMWYTLHNLLHIVHKVTDAEVDAAKTLLKNHIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 481
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A6H5JHX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX0_9PHAE) HSP 1 Score: 551 bits (1421), Expect = 2.190e-195 Identity = 286/301 (95.02%), Postives = 293/301 (97.34%), Query Frame = 1
Query: 1 ATQATNLSAESLQAAKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEII 903
A +ATNLSAESLQAAKGAVLD+IEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQG LTDMAQTLLGDVAASS AVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSIS+MMVQALLGFEYNERT+LGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDF+WYTLHNLLHIVHKVTDAEV VAKTLLKN+IYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKA D+ I
Sbjct: 35 AVKATNLSAESLQAAKGAVLDNIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGALTDMAQTLLGDVAASSSSAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISIMMVQALLGFEYNERTILGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFMWYTLHNLLHIVHKVTDAEVGVAKTLLKNHIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKAVLDKRI 335
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A836CKR9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR9_9STRA) HSP 1 Score: 247 bits (630), Expect = 8.160e-75 Identity = 143/318 (44.97%), Postives = 188/318 (59.12%), Query Frame = 1
Query: 40 AAKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
AAKG VL D+E AR P L+DHLHDAAFL + +G S LGT +VSAL D F G R VVA AGAV+ + LG VD + A F+GSDKR+R+D+ P A VA AFK P A S++++ L + A +G ++ + +G + ++WA AE N A A Y+D GLL V+ A D LD+F+W+TL L+ + HKVTD EV KT LK + + A I V GRRV E+ AR+DA++T +++ + +E +NDQDHALAAVGPI ELPDYNWIRRRS+WLR
Sbjct: 159 AAKGEVLCDLEGARLRPEDHLLDHLHDAAFLGSPLGRSVLGTPATVSALSADDVAAFASAFYTGPRTVVAAAGAVEHDAVXXXXXXXLGARPGGGAADVDAPLADAPFVGSDKRIRFDNKPLARVALAFKGPAATSEYALPLQLAAATMG-SWDRTSGIGTDVGTRWALANAENNAAYKAEVSTIAYRDTGLLVVTGTAPDVGLDNFMWFTLEALVRMCHKVTDEEVARGKTALKTQLMLATAAPAGACDDITRQVLSVGRRVHATELFARLDALSTSDVRNTVNEFVNDQDHALAAVGPIFELPDYNWIRRRSYWLR 475
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A7S0STA1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STA1_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.540e-74 Identity = 132/325 (40.62%), Postives = 195/325 (60.00%), Query Frame = 1
Query: 19 LSAESLQAAKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
L+ +S++ + +L + E + ++DHLH+ AF++T +G + LG+ ++ + N+ R V+AGAGA+ L ++ + + S ++ EPA F GSDKR+R+DSM AHVA AF+ S+++ LM++Q +LG ++ + +G N+ASK A++IAE A F YKD GL GV +A DN LDD +WYT+ NL+ + H+VTD EV+ AK LK + Q I + +GRRV AE ARID++TTK+I+++A+ IND+DHALAAVGPI ELPDYNWIRRRS+W R
Sbjct: 137 LTEKSIEIERDVILREAEEVGKQYEETILDHLHETAFMNTGLGRTILGSEHNIKNIKRSDIVNYIQTHYTADRFVIAGAGAIDHKQLVELTDKYFNKLPSKSSNSLSTIYEPAIFTGSDKRIRFDSMSEAHVALAFQGASWTSEYAFPLMLIQTILG-SWDRTSAVGKNSASKLARDIAEGEFAHSFVTFNTCYKDTGLFGVYLVAPDNKLDDLMWYTMDNLVRLCHEVTDEEVERAKVQLKANLLTQLDNFSSITEDIGRQILTYGRRVSTAETFARIDSLTTKDIRSTANHFINDEDHALAAVGPIFELPDYNWIRRRSYWHR 460
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A4D9D6M3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6M3_9STRA) HSP 1 Score: 241 bits (616), Expect = 6.070e-73 Identity = 138/322 (42.86%), Postives = 191/322 (59.32%), Query Frame = 1
Query: 34 LQAAKGAVLDDIEAARRDPRLGLM-DHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPL-AVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
+ A KGAVL ++EA D L+ +HLH AF DT + GT E+V++L +F GSR+ VAG G + + +A + G + P A+DE P+ F GSD R R+DS P AHVA AF+ SK + L++VQ ++G +++ + +G N S ++ +AE LA T F YKD GL GV +A +N L+D WYTLH LL +VH+ TD EV+ AK LK S A + + +GR + AE AR+DA+T ++KA+AD+++NDQDHALAAVGP+HELPDYNWIRRRS+WLR
Sbjct: 139 VDAEKGAVLAEMEAVTVDAHEQLLFEHLHATAFQDTFLAQPVAGTPETVASLNKSTLVDFTKANFTGSRMAVAGTGGL---TMEGLAAAVEGWAVGAGPTSALDEPATPSVFTGSDVRARFDSYPLAHVALAFETAGWRSKLQMPLLLVQTIIG-SWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYMVAPENKLEDLAWYTLHALLKVVHQTTDEEVEYAKAQLKTNYLSSISSLAGANDNLGRQMLTYGRVMSPAEFFARVDALTVADVKAAADQVVNDQDHALAAVGPLHELPDYNWIRRRSYWLR 456
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A7S3Q7A4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7A4_9STRA) HSP 1 Score: 241 bits (614), Expect = 2.030e-72 Identity = 132/327 (40.37%), Postives = 196/327 (59.94%), Query Frame = 1
Query: 13 TNLSAESLQAAKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
+ L +++ + +L ++E + ++DHLH AF T +G + LG +++ +L D + R+V+AGAGA+ L +MA G + ++ ++ A++PA F GSD R+++DS NAH+A AF+ S+++ LM++Q +LG Y+ + G N ASK QE+AE LA T F YKD GL G+ +A DN LDD +WY + NL+ +VH +D EV+ AK LK + G + A I + +GRR+ AE+ +RIDAIT +IKA+A ++INDQDHALAAVG IHELPDYNWIRR S++LR
Sbjct: 151 SKLEPAAIERERDVILREMEEVNKQQEELVLDHLHATAFQGTGLGRTILGPEDNIRSLTRDDLAEYIHTHYTAPRMVIAGAGAIDHAQLCEMADANFGSLPSAPKAGLESAMDPAVFTGSDIRVKFDSDNNAHLALAFEGASWTSEYAFPLMLMQTMLG-SYDRASGFGKNVASKMCQEVAEHELAHSITTFNTCYKDTGLFGIYAVAPDNKLDDLMWYVMGNLVRMVHSPSDEEVERAKVNLKATMLMGLDGNSNVAEDIGRQLLTYGRRMTPAEIFSRIDAITVDDIKATAAKVINDQDHALAAVGGIHELPDYNWIRRHSYYLR 476
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A6V1PYM0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PYM0_HETAK) HSP 1 Score: 238 bits (607), Expect = 1.270e-71 Identity = 146/321 (45.48%), Postives = 189/321 (58.88%), Query Frame = 1
Query: 43 AKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLK-NYIYQQNSG---CGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
AK VL ++ +A LM+ LH+AA+LDTA+G+ G+A++V L R+VVAGAG V Q L +A+ G +E F GSDKR+RYDSM A VA AF+ S+ S+ LM++Q LLG ++ V+G N ASK+ Q++AE AA F YKD GL G+ A D++LDD + H+L+ + H+VTDAEV AK LK N Q NSG C D I + +GRRVP AEM ARIDA+TT ++K A +IND+DHALAAVG IHELPDYNWIRRRS+WLR
Sbjct: 139 AKTGVLAELASADVPGGAALMEDLHEAAYLDTALGLPIKGSADTVGGLSAGDVAALKEGAYTAPRLVVAGAGGVGQEQLAALAEEAFGGXXXXXXXXXXXXMEAGIFCGSDKRIRYDSMKTAKVALAFETGGWTSEQSVPLMLMQTLLG-AWDAGGVMGPNMASKFGQDVAEEGCAASYGAFLAQYKDTGLFGIQAAAGDSNLDDLAYAMTHHLVRLCHQVTDAEVARAKRALKANLRAQANSGPAICED----IGRQMLAYGRRVPAAEMEARIDALTTDDVKTVAKAVINDKDHALAAVGGIHELPDYNWIRRRSYWLR 454
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A6S8R8K4_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6S8R8K4_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.880e-69 Identity = 129/321 (40.19%), Postives = 189/321 (58.88%), Query Frame = 1
Query: 31 SLQAAKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
+++ + +L ++ + ++DHLH AF T +G + LG E++ +L + R+V+AGAGA+ L +A G + + V+ A++PA F GSD R+R+DS AHVA AF+ S+++ LM++Q +LG Y+ + LG N ASK QE+AE LA + F YKD GL G+ +A DN LDD +WYT++NL+ +VH + EV+ AK LK + G + A I + +GRR+ AE+ +RIDA+T ++KA+A INDQ+HALAAVG IHELPDYNWIRR S+WLR
Sbjct: 184 AIERERDVILREMAEVNKQQEELVLDHLHATAFQGTGLGRTILGPEENIRSLAKSDLSGYINTHYTAPRMVIAGAGAIDHEELCGLAGEHFGSLPTAPKDGVEVAMDPAVFTGSDVRIRFDSDNTAHVALAFQGASWTSEYAFPLMIMQTMLG-SYDRASGLGKNVASKMCQEVAEHELAHSISTFNTCYKDTGLFGIYAVAPDNKLDDLMWYTMNNLVRLVHSPSSEEVERAKVNLKATMLMGLDGHSNVAEDIGRQLLTYGRRMTPAEIFSRIDAVTVADVKATAATFINDQEHALAAVGGIHELPDYNWIRRHSYWLR 503
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A7S1D561_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D561_CYCTE) HSP 1 Score: 228 bits (580), Expect = 2.870e-67 Identity = 126/298 (42.28%), Postives = 179/298 (60.07%), Query Frame = 1
Query: 100 LMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
++DHLH AF T +G + LG E++ +L + ++ R+V+AGAGA+ L +A G + V+ A++PA F GSD R+++DS AHVA AF+ S+++ LM++Q++LG Y+ +G N AS+ QEIA A + F YKD GL GV ++ DN LDD +W +HNL+ +VH +D EV+ AK LK + G + A I + +GRR+ AE+ ARIDA+TT +IKA+A + INDQDHALAAVG IHELPDYNWIR S+W+R
Sbjct: 189 VLDHLHGTAFQGTGLGRTILGPEENIRSLTKNDLLDYISTHYTAPRMVIAGAGAINHEELCGLADQHFGKLPTVPAGGVEVAMDPAVFTGSDIRVKFDSHDTAHVAIAFEGAAWTSEYAFPLMLMQSILG-SYDRTAPIGKNIASRMCQEIATEGSAHSVSTFNTCYKDTGLFGVYAVSPDNKLDDLMWGMMHNLVRLVHTPSDEEVERAKLNLKATMLMGLDGNSNIAEDIGRQLLTYGRRMTVAEIFARIDAVTTNDIKATAAKFINDQDHALAAVGSIHELPDYNWIRANSYWIR 485
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Match: A0A2D4BV02_PYTIN (Mitochondrial-processing peptidase subunit beta n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BV02_PYTIN) HSP 1 Score: 225 bits (574), Expect = 1.510e-66 Identity = 129/329 (39.21%), Postives = 191/329 (58.05%), Query Frame = 1
Query: 7 QATNLSAESLQAAKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMSPLGTAESVSALGLDGAKNFYGRGLAGSRVVVAGAGAVKQGVLTDMAQTLLGDVAASSPLAVDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPPAGSKHSISLMMVQALLGFEYNERTVLGVNAASKWAQEIAELNLAAVATPFYKGYKDAGLLGVSCIASDNHLDDFVWYTLHNLLHIVHKVTDAEVDVAKTLLKNYIYQQNSGCGDAAGIIAGDVRQFGRRVPYAEMVARIDAITTKEIKASADEIINDQDHALAAVGPIHELPDYNWIRRRSFWLR 993
Q + L +++ + +L ++E + + D LH+ AF+ +G + LG E++ L +++ R+VVAGAGAV L +AQ GD+ S A EPA F+GSD R++ D MP AHVA AF+ S+H+ L+++Q LLG +++ + G+N +SK Q +AE LA F Y+D GL GV +A L+D WYT+ L+ +VHK +D EV+ AKT LK + Q G I + +GRR+ AE+ ARIDA+ ++ +ADE+IND++H+LAA+GPIHELPDYN+IRRRS+WLR
Sbjct: 144 QNSKLDEAAIERERDVILREMEEVNKQHEEVIXDRLHETAFMGQGLGRTILGPIENIKNLKKADLEDYIATHYTAPRMVVAGAGAVDHEQLVQLAQNAFGDLPTKSTSA--PTFEPARFVGSDVRIKDDEMPLAHVAIAFEGFSWTSEHAFPLLVMQTLLG-QWDRTSGAGMNMSSKLGQVVAEKELAHSFMAFNTCYQDTGLFGVYAVADQYKLNDLTWYTMEALVRLVHKTSDEEVERAKTQLKANMLMQLDGTSPICEDIGRQLLTYGRRLTPAEIFARIDAVDAAAVRKTADEVINDKEHSLAALGPIHELPDYNFIRRRSYWLR 469 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11004.890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11004.890.1 >prot_Ecto-sp13_S_contig11004.890.1 ID=prot_Ecto-sp13_S_contig11004.890.1|Name=mRNA_Ecto-sp13_S_contig11004.890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=331bp ATQATNLSAESLQAAKGAVLDDIEAARRDPRLGLMDHLHDAAFLDTAMGMback to top mRNA from alignment at Ecto-sp13_S_contig11004:438..4550+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11004.890.1 ID=mRNA_Ecto-sp13_S_contig11004.890.1|Name=mRNA_Ecto-sp13_S_contig11004.890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4113bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11004:438..4550+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11004:438..4550+ >mRNA_Ecto-sp13_S_contig11004.890.1 ID=mRNA_Ecto-sp13_S_contig11004.890.1|Name=mRNA_Ecto-sp13_S_contig11004.890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=993bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11004:438..4550+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |