mRNA_Ecto-sp13_S_contig110.882.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: D7FJH9_ECTSI (TPH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH9_ECTSI) HSP 1 Score: 352 bits (904), Expect = 5.030e-117 Identity = 223/237 (94.09%), Postives = 226/237 (95.36%), Query Frame = 1
Query: 1 MALVASDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKKSTGRKMLVGEVPPKATVITEEELAQMKRRAIITSLADEEAARMGRENMLEERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 711
MALVASD RSE+SGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKKSTGRK+L GEVPPKATVITEEELAQMKRRAIITSLADEEAAR+GRENMLEERQRA XXXXXXXXXXXXXXXX LKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQ LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE
Sbjct: 1 MALVASDARSESSGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKKSTGRKILEGEVPPKATVITEEELAQMKRRAIITSLADEEAARVGRENMLEERQRAXXXXXXXXXXXXXXXXXXXLKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQ------LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 231
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: A0A835YY84_9STRA (Tumor suppressor, Mitostatin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY84_9STRA) HSP 1 Score: 166 bits (421), Expect = 4.950e-45 Identity = 124/238 (52.10%), Postives = 154/238 (64.71%), Query Frame = 1
Query: 10 VASDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRK----KSTGRKMLVGEVPPKATVITEEELAQMKRRAIITSLADEEAARMGRENMLEERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 711
+ SDTRSEAS GSG+ R+YRVVSRGS VDE+LFG + SKG K K T + V + P T+++ +EL ++ AII S ++E+A R XXXXXX KA +SD+E+E +A +Q+V+KMA EKLD NNDLVKMLNSLG+RAAAFTIRD+Q LA++ +E +EK YD RMD +MELDRLK L RD EQAK KR EDRKVI EQIE
Sbjct: 1 MVSDTRSEASRGSGT------RRYRVVSRGSEVDEALFGGA-SKGSKGSPAKHTTQAQKVAKPAPNTTMLSTKELHSIREHAIIKSNSEEQAERXXXXXXXXXXXXXXXXXXXXMIQMADEAKAKAKRSDLELETIAREQLVRKMANEKLDENNDLVKMLNSLGSRAAAFTIRDQQ------LADRASKESTEKEYDTRMDKVMELDRLKSLQARDEVEQAKLRKRHEDRKVIMEQIE 225
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: A0A7S3UXE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXE1_HETAK) HSP 1 Score: 136 bits (343), Expect = 1.010e-33 Identity = 123/254 (48.43%), Postives = 159/254 (62.60%), Query Frame = 1
Query: 16 SDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGS-------------SNSKGRKKSTGRKMLV----------GEVPPKATVITEEELAQMKRRAIITSLADEEAARMGRENMLEERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
SDT S+A SARSGG R+YR VS SNVDESLFG SN R + + R M + +VP A+++T +L +MK A++ + D R E E ++ XXXXXXXXXXXXXXXX KSD+EVE++A DQ +++MA K+ DLVK+LN+LGARAAAFTIRD+Q L K R+E SE Y+ RM+M+MEL+RLKDL +++AEE AK +KRVEDR+VI EQI
Sbjct: 2 SDTYSKAP----SARSGG-RRYRKVSGNSNVDESLFGGGGGSGSRQTSRPGSNGSYRSQRSARGMAMQNNGSRIVEASKVPANASIVTRSDLMRMKAGAVLKTEQDLINEREAAEAEREIKEXXXXXXXXXXXXXXXXXXXXXXKSDLEVEKIARDQQIRQMAEAKMTEETDLVKLLNTLGARAAAFTIRDQQ------LENKKRQEESELEYERRMEMLMELNRLKDLQRQEAEEAAKAAKRVEDRRVIEEQI 244
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: A0A7S3M6Y1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6Y1_9STRA) HSP 1 Score: 129 bits (323), Expect = 5.130e-31 Identity = 99/210 (47.14%), Postives = 142/210 (67.62%), Query Frame = 1
Query: 79 YRVVSRGSNVDESLFGSSNSKGRKKSTGRKMLVGEVPPKATVITEEELAQMKRRAIITSLADEEAARMGRENMLEERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
YR V+ S VDESLFG + + + GR+ + G + P + VI+ +EL +++ ++I + A+ A + E + XXXXXXXXXXXXXXXX A KSD+E+ +A ++ ++ MA +KLD N D+VK+LNS+ RA AFTIRD+Q L EK+R EK YDER+D+++E+DR++D+ KR+ EEQ +K+KRVEDRKVI EQI
Sbjct: 18 YRSVAHTSQVDESLFGKDSGRNGTMTKGRRTVTGPLAPSSIVISADELNRIRNGSVIKTEAEIAADKEHAERLKXXXXXXXXXXXXXXXXXXXXXXXLAKKSDVEIAEIARNKAIRNMAEKKLDENADVVKLLNSMAQRATAFTIRDQQ------LEEKERLAKLEKEYDERLDVMIEIDRVQDIMKRENEEQYRKTKRVEDRKVINEQI 221
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: A0A7S2V109_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V109_9STRA) HSP 1 Score: 119 bits (298), Expect = 8.750e-30 Identity = 100/199 (50.25%), Postives = 137/199 (68.84%), Query Frame = 1
Query: 124 GSSNS-KGRK-KSTGRKMLVGEVPPK--ATVITEEELAQMKRRAIITSLADEEAARMGRENMLEERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
GSS S KGR ++TG ++ G+ + A VI+ +L MK R +I + AD A + +E XXXXXXXXXXXXXXXXKA KSDIE+ +MA DQ V+K+A EK++ +D+VK+LN+LGARAAAFTIRD+Q +E L E+ E+ Y++RMDM+ME+DRLKD+ R+ EE+ K++KR EDR VI +Q+
Sbjct: 5 GSSGSQKGRSLRNTGSNIVKGKSSSQTGAVVISRRDLQAMKARTVIKTEADMRAEHLAKEEERXXXXXXXXXXXXXXXXXXXXXXXKAKKSDIEIAQMARDQTVRKLAEEKMNEESDMVKLLNTLGARAAAFTIRDEQLSEKARLKER------EQEYEQRMDMLMEIDRLKDIKMREDEERMKQAKRAEDRGVIMQQM 197
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: A0A8J2SPE8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPE8_9STRA) HSP 1 Score: 112 bits (279), Expect = 5.740e-25 Identity = 80/201 (39.80%), Postives = 119/201 (59.20%), Query Frame = 1
Query: 106 VDESLFGSSNSKGRKKSTGRKMLVGEVPPKATVITEEELAQMKRRAIITSLADEEAARMGRENMLEERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
VDESLFG + K+ GR G +P +A VI+ EL +++ I + A+ + + E + + +AA KA KS +E+E+ A + +++MA + LD N DLVK L +GARAAAFTIRD+Q L E+ +E +K Y++RMD++ME+DRL+DL +R+ + ++ KRVEDRKVITEQI
Sbjct: 3 VDESLFGR-----KTKTKGRG---GALPARAAVISAAELRRIQGSTRIITAAEIQKDKDELEAIHAVKHKAARARKDRMRALAAASKNKAKKSTMELEKEARKETIRQMADKTLDENLDLVKYLRGIGARAAAFTIRDQQ------LNERGAKEARQKAYEDRMDLLMEVDRLRDLKQREDADNLRRKKRVEDRKVITEQI 189
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: A0A7S1XVL0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVL0_9STRA) HSP 1 Score: 109 bits (272), Expect = 7.670e-24 Identity = 91/215 (42.33%), Postives = 127/215 (59.07%), Query Frame = 1
Query: 70 SRKYRVVSRGSNVDESLFGSSNSKGRKKSTGRKMLVGE-VPPKATVITEEELAQMKRRAIITSLADEEAARMGRENML-EERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
S YR V++G VDE+LFGS TGR+ + + V + VI+ +L +++R + D+ A R EER+ XXXXXXXXX +SD+E+E A + +++ A EK+D NNDLVKML+SLG RA FT+RD+Q E K RE + YD +MD++ME DR+ D+ +R+A E +K +KRVEDRKVI EQI
Sbjct: 53 SSTYRTVAKGPEVDETLFGS---------TGRRRVRRQDVDTTSIVISASDLRDIRKRVTVD---DDNAGRSAAMIAAREEREXXXXXXXXXXXXLEVEAKSXXRRSDLEIEEEARQEAIREWAREKIDMNNDLVKMLSSLGKRAEIFTVRDRQCRE------KLEREAKAREYDVQMDLMMEADRVADIQRREAIEASKTAKRVEDRKVIEEQI 249
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: A0A6H5LHZ8_9PHAE (TPH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHZ8_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.600e-21 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1
Query: 544 LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 711
LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE
Sbjct: 5 LAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 60
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: D0NQZ6_PHYIT (TPH domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=D0NQZ6_PHYIT) HSP 1 Score: 93.2 bits (230), Expect = 3.590e-18 Identity = 80/236 (33.90%), Postives = 120/236 (50.85%), Query Frame = 1
Query: 64 GGSRKYRVVSRGSNVDESLFGSSN--SKGRKKS----TGRKMLVGEVPPKAT--------------VITEEELAQMKRRAIITSLADEEAARMGRENMLEERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQIE 711
GGSR+YR V+ VD++LFG N +K RKK GR ++ + + V+ E+EL ++K I + AD EA RE E ++ A+ +A KS+IE A Q + + A + D +D VK++ +LG RA AFTIRD+Q L K E VYDE+M+ +ME++RL+ L +++ ++ KK KR DRKV+ +QIE
Sbjct: 21 GGSRRYRRVAHTHQVDDTLFGEKNQLAKNRKKDRTLQAGRDIVGAQSSASSNQETSGRMVTKTPIVVVPEDELERIKAETKILTAADLEALEAKREADQEHQRLASKARKEHMLKLSEEAALRAPKSEIEQIFSAEKQEILRRARVQKDQMHDSVKLMKTLGTRAQAFTIRDQQ------LKVKSELEDEHHVYDEKMNTLMEIERLESLKRQEHRDEVKKQKRYADRKVLEDQIE 250
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Match: A0A2D4CJF6_PYTIN (TPH domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJF6_PYTIN) HSP 1 Score: 90.1 bits (222), Expect = 1.570e-17 Identity = 87/263 (33.08%), Postives = 129/263 (49.05%), Query Frame = 1
Query: 13 ASDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGSSN------SKGRKKSTGRKMLVG-------------------------EVPPKATVITEEELAQMKRRAIITSLADEEAARMGRENMLEERQRAAXXXXXXXXXXXXXXXXKALKSDIEVERMAHDQMVKKMATEKLDANNDLVKMLNSLGARAAAFTIRDKQATELTGLAEKDRREGSEKVYDERMDMIMELDRLKDLTKRDAEEQAKKSKRVEDRKVITEQI 708
AS S ASGG G+ S +R+YR VS G+ VD++LFGS R GR+++ + PP V+ E +L ++K+ A I + A E RE LE+ + +A +A KS+I+ A Q V + A D ++D VK++ +LGARA AFTIRD+Q L E+ VYDE+M+++ME++RL+ L +++ + AKK KR DRKV+ EQI
Sbjct: 8 ASSRGSLASGG-GNVPSTATRRYRRVSSGAQVDDTLFGSKTMPKAMLKNARTLQAGREIVGASSSNQEDKQQQAPRASAATAHPHRTKAPPAPRVVDESDLERIKQEAKILTPAHMEELAAKREAELEQIRLSAKARKEHMQRLGEDAARRAPKSEIDQLLYAEKQQVLRKAAILKDLDHDSVKLMRTLGARAQAFTIRDEQKKMKKELEEEHH------VYDEKMNILMEVERLEGLNRQEEIDDAKKVKRYADRKVLEEQI 263 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig110.882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig110.882.1 >prot_Ecto-sp13_S_contig110.882.1 ID=prot_Ecto-sp13_S_contig110.882.1|Name=mRNA_Ecto-sp13_S_contig110.882.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp MALVASDTRSEASGGSGSARSGGSRKYRVVSRGSNVDESLFGSSNSKGRKback to top mRNA from alignment at Ecto-sp13_S_contig110:2..4069- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig110.882.1 ID=mRNA_Ecto-sp13_S_contig110.882.1|Name=mRNA_Ecto-sp13_S_contig110.882.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4068bp|location=Sequence derived from alignment at Ecto-sp13_S_contig110:2..4069- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig110:2..4069- >mRNA_Ecto-sp13_S_contig110.882.1 ID=mRNA_Ecto-sp13_S_contig110.882.1|Name=mRNA_Ecto-sp13_S_contig110.882.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig110:2..4069- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |