mRNA_Ecto-sp13_S_contig11.879.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: D7G4R5_ECTSI (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R5_ECTSI) HSP 1 Score: 719 bits (1855), Expect = 1.990e-257 Identity = 398/436 (91.28%), Postives = 405/436 (92.89%), Query Frame = 1
Query: 166 MFGATVKRRRASTSVKQEPVQDAAPLTANIKQPLDGLWHDLCVPPDELRPDSTLTIGQCFNWRQAGADCWVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSLGAVSTDGDAKAAAALAATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNTTECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKRGVAMRKRGRTTR 1473
MFG VKRRRASTSVKQEP QDAAPLTANIKQPLDGLWHDLCVPP+ELRPDSTLT+GQCFNWRQAGADCWVGVLGRE + RQTPCTTLFRSL AV+TDGDAK AAALA TLREYFFLRTPLAPLY+RWSEGDPRMAAVA SISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGN TECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKL+HSNGGA WALDMR KDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVG+LFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AMRKRGRT R
Sbjct: 1 MFGPAVKRRRASTSVKQEPAQDAAPLTANIKQPLDGLWHDLCVPPEELRPDSTLTVGQCFNWRQAGADCWVGVLGREVIAI-----------RQTPCTTLFRSLSAVTTDGDAKVAAALATTLREYFFLRTPLAPLYQRWSEGDPRMAAVACSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNITECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLMHSNGGAGWALDMRNKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGNLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMRKRGRTAR 425
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A7S1CUH0_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUH0_9STRA) HSP 1 Score: 311 bits (797), Expect = 1.530e-98 Identity = 173/361 (47.92%), Postives = 228/361 (63.16%), Query Frame = 1
Query: 277 WHDLCVPPDELRPDSTLTIGQCFNW---------------RQAGADC-----WVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSLGAVSTDGDAKAAAALAATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNTTECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKKDRDE-VRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLV-ECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKL 1293
W DL VPP ELRP STLT GQCFNW RQ+ WVG LG ++ ++TP TTLFR L T+G + L++YF L TPL+PLY WS+ D R+ +A++I GVR++RQ P+EC+FSFICSSNNNIPRIT ML R TYG ++++ + + N + L + SFPT+D+LA A+E DLRAMG GYRAK+I+ + L+ ++GG ++ L++R D + V+ +L+ G+G KVADC+ALFSLDQ +IPVD+HV IA RDYDPT++ + KSLTPT+Y RVGDLFR RF +RAGWAHSLLF AELP F++ L
Sbjct: 9 WIDLDVPPQELRPSSTLTNGQCFNWMVVETEESPDAINSPRQSAWGTHDGKEWVGPLGDRVLSI-----------KETPTTTLFRVLHG-PTEGTKE-------YLQQYFRLETPLSPLYEEWSKADTRLKKIAAAIPGVRILRQAPLECMFSFICSSNNNIPRITKMLSSFRETYGSFMMDI-----PISSSAANDDDS-------LSIFSFPTLDSLAN-ASEGDLRAMGLGYRAKFIIGTRDLLQTSGGEEFLLNLRSNDDCQAVQDELIKFSGIGRKVADCVALFSLDQDDSIPVDIHVQHIASRDYDPTVLGQAKSLTPTIYKRVGDLFRSRFPNRAGWAHSLLFVAELPSFRSVL 337
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A6U6FTQ8_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6FTQ8_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.030e-97 Identity = 184/375 (49.07%), Postives = 224/375 (59.73%), Query Frame = 1
Query: 277 WHDLCVPPDELRPDSTLTIGQCFNWRQAGADC---------------------------WVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSLGAVSTDGDAKAAAALAATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNTTECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMD 1320
W DL + PDELRP +TLT GQCFNW +D WVG L F + R+T TTLFR L G K A LR YF L T L PLY WSE D R++ +A++I GVRVVRQDP EC+FSFICSSNNNIPRIT ML +LR YG L+ V L + G L + + L+++SFPT+ ALA AT+ DLRAMG GYRAKYI ++ KL++ GG D+ +RK + V+ +L+ G+G KVADC+ALFSLDQ IPVDVHV IA R+YDPTLVE KSLTPTVY RVG++FR RF AGWAHSLLF AELP F+ L ++ +MD
Sbjct: 201 WTDLRISPDELRPSATLTTGQCFNWIVVQSDRNGLPSGDDGGVANMAQKSAWGTHDATEWVGPLRDWVFCI-----------RETSTTTLFRVL-----HGTPKGAEEY---LRRYFQLETQLVPLYNLWSESDSRLSKIAAAIPGVRVVRQDPKECLFSFICSSNNNIPRITLMLSRLREKYGVHLMEVPARTLDSGGVLRSGEK--------LKIYSFPTLAALAP-ATDIDLRAMGLGYRAKYIAETTKLLNEVGGEDFLFSLRKSNASFVQEELIKFSGIGRKVADCVALFSLDQIEAIPVDVHVEHIARRNYDPTLVEVKSLTPTVYKRVGNIFRRRFSSHAGWAHSLLFVAELPSFRPALPGDIVEEMD 547
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A4D9CXL3_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXL3_9STRA) HSP 1 Score: 322 bits (826), Expect = 2.230e-97 Identity = 180/384 (46.88%), Postives = 226/384 (58.85%), Query Frame = 1
Query: 277 WHDLCVPPDELRPDSTLTIGQCFNWRQAGADC------------------------------WVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSLGAVSTDGDAKAAA-------ALAATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNTTECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQM 1317
W DL VPP ELRP+ +LT+GQCFNWR+ G + W+GVL R + RQTP TTL R +GA +G + L A L++YF + T L PLY W+EGD RM VA + GVRV+RQDPVEC+FSFICSSNNNIPRI ML +LR+TYG+ L GKG H+FP + +LA+ A+E +LR +G GYRA++I +A + GG +W + +R+K R+E + L T GVG KVADC+ALFSLDQ IPVDVHVWRIACRDY P L E KSLTP VY VGD+FR++FG AGWAHSLLFAAELP ++A+L +Q +M
Sbjct: 24 WMDLDVPPHELRPEFSLTMGQCFNWRRQGLETQAKVAVGEGEEGGREXXXXXXXXGGGCDKVWIGVLDRHVLEI-----------RQTPTTTLVRRVGASVDEGRVEGGREGEVEDKVLMARLQDYFQVNTSLRPLYHCWAEGDVRMKTVAEHLPGVRVLRQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPL---GKG-----------------------YHAFPPLSSLAS-ASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCTFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLILQNEM 369
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A8J5XJ63_DIALT (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJ63_DIALT) HSP 1 Score: 305 bits (781), Expect = 1.220e-94 Identity = 170/351 (48.43%), Postives = 214/351 (60.97%), Query Frame = 1
Query: 274 LWHDLCVPPDELRPDSTLTIGQCFNWRQAGADC---WVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSLGAVSTDGDAKAAAALAATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNTTECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQM 1317
+WH L ELR +TL GQ F W + G+D WVGV+G L+ C P S D AL L YF L TPL LY RW D R AV +++ G+R++RQ+PVEC+FSFICSSNNNI RITG+L +LR YG + A G A +P +FPT++ LA + EA+LR +G GYRA++I ++A L+ GGADW ++ R + R++V++ LV L GVG KVADC+ALFSLDQ +TIPVDVHVW+IACRDYDP+L E KSLTP VY RVGDLFR RFG AGWAHS+LFAAELP F+A L +Q +M
Sbjct: 18 MWHRLGAARAELRLHATLANGQAFTWSRVGSDAKSPWVGVVGGRVIVLKEEDSHVEFCCPSAP---------EESPD-------ALREALTAYFQLETPLVELYERWRSADERTCAVLNALPGLRILRQEPVECLFSFICSSNNNIGRITGILARLRAAYGTRIPIRDASIFGAASGDG--------ADVP-SFFAFPTIERLA-QVPEAELRELGLGYRARFIRETASLLLERGGADWLVEQRGRPREDVQAALVELSGVGRKVADCVALFSLDQPATIPVDVHVWQIACRDYDPSLHEAKSLTPAVYGRVGDLFRARFGAHAGWAHSVLFAAELPVFRALLPDVLQERM 342
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A7S2DRB9_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRB9_9STRA) HSP 1 Score: 300 bits (768), Expect = 1.590e-92 Identity = 169/383 (44.13%), Postives = 223/383 (58.22%), Query Frame = 1
Query: 277 WHDLCVPPDELRPDSTLTIGQCFNWR----------QAGADC-------------------WVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSLGAVSTDGDAKAAAALAATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLN---VGKGGLAATGALGNTTECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKKD---RDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMD 1320
W+DL PP+ELR ++L GQCFNWR + C WVGV+G L R+T + F L + D + L + L + F L PL LY WS D R+A VA +I G+RV+RQDPVEC+F+FICSSNNNIPRIT M+ ++R YG L++ V GG + + + T + + +SFP V+ +A RA E + R +G GYRA+++ +SA + S GG W + +R +D R+ V +L GVG KVADC+ALFSLDQ+ IPVD HVW+IACRDYD TL E KSLTP +Y R+GDLFR RFGD+AGWAHSLLFAAEL FK++L +M+ +MD
Sbjct: 47 WYDLSTPPEELRVTASLATGQCFNWRPIKLPLVSTEKRPTTCASSPPANAIGLEKSDIDFDWVGVVGDRVVAL-----------RETGGSVHFACLNNKNAKKDQETE--LRSELEDMFQLEVPLKGLYHSWSRADDRLARVAEAIPGLRVLRQDPVECLFAFICSSNNNIPRITLMMNRIRAAYGTHLMDIAVVSDGGSTKSSSTDDPTRIAQPDTVVHRFYSFPDVEVMA-RAREEEYRHLGLGYRARFVRESAGSLLSLGGRPWLVGLRDRDAYSREAVLEELKKFTGVGSKVADCVALFSLDQSDLIPVDTHVWQIACRDYDSTLSEVKSLTPKIYDRIGDLFRTRFGDKAGWAHSLLFAAELAAFKSQLPEDMREEMD 415
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A0G4ECR9_VITBC (DNA-(apurinic or apyrimidinic site) lyase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECR9_VITBC) HSP 1 Score: 294 bits (753), Expect = 1.420e-90 Identity = 176/413 (42.62%), Postives = 226/413 (54.72%), Query Frame = 1
Query: 232 AAPLTANIKQPLDGLWHDLCVPPDELRPDSTLTIGQCFNWRQAGADC-------------------WVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSL--GAVSTDGDAKAAAALAATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNTTE--------------------------CEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKKD--RDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDE 1323
AA TA W DL VPP EL+P+ L GQCF+++ A+ WVGV+GR + + RQT TTLFR L S+DG A +RE+F L T +APLYRRW D RM + ++ G RV++QD EC+F+FICSSNNNI RIT M+ +L+R YGDL+ + TGA + E A +SFPT+D LA A+E LR++G GYRAK +V++AK + GG + ++ R EV+ +L+ GVG KVADC+ LFSLD+ IPVD HVWRIACRD D +L KSLTP VY RVGDLFRDR+G RAGWAHSLLF AELP F+A+L +Q++M E
Sbjct: 2 AAAATATATAASKIPWTDLQVPPPELQPEFCLVSGQCFSFKPCEAEAGAVEAPSDGAGDGVSDSKEWVGVIGRGVYHI-----------RQTEQTTLFRCLHHSRYSSDGSE-----CVAEVREFFRLHTEMAPLYRRWEGADARMRQIVPALRGARVIQQDATECLFTFICSSNNNISRITLMIDRLKRHYGDLIATITSPTPTLTGAALQEHQDSISRDGSGGGLRXXXXXXXXXXXXXXXEHAGSGYSWYSFPTIDRLAA-ASEQGLRSIGLGYRAKSVVETAKALKELGGEAFLQKLKSPTMTRQEVQKELLQFRGVGRKVADCVGLFSLDRFDAIPVDTHVWRIACRDLDRSLQSAKSLTPAVYDRVGDLFRDRYGSRAGWAHSLLFTAELPAFRARLPASLQQEMSE 397
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A7S3Q6L0_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q6L0_9STRA) HSP 1 Score: 292 bits (747), Expect = 5.400e-89 Identity = 168/376 (44.68%), Postives = 228/376 (60.64%), Query Frame = 1
Query: 268 DGLWHDLCVPPDELRPDSTLTIGQCFNWRQAGADCWVGVLGREQ-FTLQTSVCTGA-----------------CMCRQTPCTTLFRSLGAVSTDGDAKAAAALAATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNTTECEEWAKLPLEL----HSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKK-DRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVE-CKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDE 1323
D W DL VPP ELRP +TLT GQCFNW D + ++ + + TS A ++TP TT++R L T ++ L +YF L T L PLY+ WS+ D R++ +A+ I G+R++RQDPVEC+FSFICSSNNNIPRIT ML R TYG+ ++++ EC+ + PLEL +SFPT++ L + +TE +LR MG GYRAKYI+++ ++ GG ++ L +RK+ D V+ +L+ G+G KVADC+ALFSLDQ + IPVDVHV IA RDYDPT+++ KSLTPT+Y +V LF+DRF + AGWAHSLLF AEL F+ L EM MD+
Sbjct: 116 DNSWIDLKVPPHELRPSATLTTGQCFNWNVVHDDIRIRMMEENKDMDILTSASASAWGTFNETEWVGPISNMILSIKETPDTTMYRILYQSPTCDVNHIN--MSEFLTDYFQLETALLPLYQSWSQNDERLSQIAAVIPGLRIIRQDPVECLFSFICSSNNNIPRITKMLSSFRETYGEKMMDLPV----------RLLECDGLSLEPLELTMAIYSFPTLEELKS-STEKELREMGLGYRAKYIIETRDMLIDFGGKEYLLSLRKQSDSKAVQEELIQFSGIGRKVADCVALFSLDQHNAIPVDVHVQHIASRDYDPTVLDGAKSLTPTIYQKVARLFQDRF-EYAGWAHSLLFVAELKSFRDVLPAEMVADMDK 477
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A7S0LU75_9EUKA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LU75_9EUKA) HSP 1 Score: 272 bits (695), Expect = 1.370e-83 Identity = 155/321 (48.29%), Postives = 200/321 (62.31%), Query Frame = 1
Query: 373 WVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSLGAVSTDGDAKAAAAL---AATLREYFFLRTPLAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNTTECEEWAKLPLE-LHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRKKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDE 1323
WVGVLG L RQT FR LG V++ A AA + A L +YF L PLAP+Y W+ D RM +A+++ G+RV+RQ+P EC+FSFICSSNNNI RI G+L LR YG + ++ +G A A E + + E +FP+V+ LA A+E +LR +G GYRA +I +A + G W +R++D D VR +L L GVGPKVADC+ALFSLDQ T+PVD HVW IACR++DP+L EC SLTP VYARVG LFR RFG +GWAH LLFAAELP F+++L +M +M E
Sbjct: 1 WVGVLGPRVLEL-----------RQTESDCFFRCLGEVASAESAPAAETVDHVRAELVDYFQLSKPLAPMYEHWASADRRMNRIAAALPGMRVLRQEPHECLFSFICSSNNNIGRIGGILQSLRARYGPRI-SLYEGIDTADAATFGGDEITDLQAVDDEAFFAFPSVETLA-EASEEELRGLGLGYRADFIRQTALALRQKGDG-WLCSLREEDVDTVREELCALRGVGPKVADCVALFSLDQVETVPVDTHVWDIACREFDPSLRECLSLTPNVYARVGALFRSRFGTYSGWAHQLLFAAELPQFRSRLPADMVEEMAE 307
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Match: A0A516AGB3_LINPO (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AGB3_LINPO) HSP 1 Score: 276 bits (706), Expect = 2.780e-83 Identity = 175/407 (43.00%), Postives = 223/407 (54.79%), Query Frame = 1
Query: 121 CAFRSLPFVRSRDPAMFGATVKRRRASTSVKQEPVQDAAPLTANIKQPLDGLWHDLCVPPDELRPDSTLTIGQCFNWRQAGADCWVGVLGREQFTLQTSVCTGACMCRQTPCTTLFRSLGAVSTDGDAKAAAALAATLREYFFLRTP---LAPLYRRWSEGDPRMAAVASSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNV-------GKGGLAATGA--LGNTTECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLIHSNGGADWALDMRK-KDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGDLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPE 1302
C P R+ A G+T AS + Q A L K P G W DL PP ELR D TLT GQ F W++ AD W+GVLG A + RQTP TTL RS+ + D +R Y L P LA LYR WS G R+A VA+ + G+RV++QDPVE +F+FICS NNN+ RI +L +LR ++G+ + + G +G L + E +L H FPT++ALA A +A LR +G GYRA Y+ +A + GG + +++ +DR EV+ L L GVGPKVADC+ALFSL Q +PVDVHVWRIA RDY+P L +SLTP VY +VG+ FR RFG AGWAHSLLF AEL G PE
Sbjct: 28 CTELDAPEPPGREGAAAGSTAG--PASPGACKVVGQPAQRLRLRCKAPAPGEWLDLRCPPAELRADCTLTPGQSFTWKRVAADQWLGVLGAS-----------AVVIRQTPSTTLVRSIAGPVVEAD----------IRAYLGLAVPCPSLAELYRTWSAGCGRLAQVAACLPGLRVLQQDPVETLFAFICSQNNNVARIALLLDRLRASFGEPICELPPWLQALDDDGPVESGLRDLAHVREFNARGRL----HRFPTLEALAA-APDAALRKLGLGYRAAYVRGAASALLERGGRGYLQGLQRCQDRLEVQRALCELPGVGPKVADCVALFSLCQHGCVPVDVHVWRIATRDYEPELRGARSLTPRVYEQVGEAFRRRFGAFAGWAHSLLFGAELAGAMRSRLPE 406 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11.879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11.879.1 >prot_Ecto-sp13_S_contig11.879.1 ID=prot_Ecto-sp13_S_contig11.879.1|Name=mRNA_Ecto-sp13_S_contig11.879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=466bp MRPVSLAAVFFGPVCAFRSLPFVRSRDPAMFGATVKRRRASTSVKQEPVQback to top mRNA from alignment at Ecto-sp13_S_contig11:51943..56197- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11.879.1 ID=mRNA_Ecto-sp13_S_contig11.879.1|Name=mRNA_Ecto-sp13_S_contig11.879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4255bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:51943..56197- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11:51943..56197- >mRNA_Ecto-sp13_S_contig11.879.1 ID=mRNA_Ecto-sp13_S_contig11.879.1|Name=mRNA_Ecto-sp13_S_contig11.879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1398bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:51943..56197- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |