mRNA_Ecto-sp13_S_contig11.877.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: D7G4R3_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R3_ECTSI) HSP 1 Score: 317 bits (812), Expect = 3.180e-104 Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 1
Query: 1 MESGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPTASMMRNAPGSIPVTPGTATRSADAWSKEPACCGLCACFSAN 486
MESGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPTASMMRNA GSIPVTPGTATRSADAWSKEPACCGLCACFSAN
Sbjct: 1 MESGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPTASMMRNAQGSIPVTPGTATRSADAWSKEPACCGLCACFSAN 162
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A835ZL19_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL19_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.870e-52 Identity = 98/162 (60.49%), Postives = 123/162 (75.93%), Query Frame = 1
Query: 1 MESGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPTASMMRNAPGSIPVTPGTATRSADAWSKEPACCGLCACFSAN 486
M + SPPQ+SGYL KKAKTGKWQ+RWFETNAH+LTYYK++K+EKLLAALNLPQVGEIRL+D D +E+N+G+LF+IELN R+Y M+A++REEAARWVEVLK LQ ++ E+S+ E P A+M+R AP I G W K+ C GLC CF A+
Sbjct: 1 MAAARSPPQMSGYLYKKAKTGKWQRRWFETNAHFLTYYKTRKVEKLLAALNLPQVGEIRLMDEDPS--DEENNGALFSIELNTRIYVMRAASREEAARWVEVLKALQALDAEDSRGHESPHAAMVR-APDGIGSGEGY-------WKKDDKCFGLCGCFQAS 152
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A836CJC0_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC0_9STRA) HSP 1 Score: 177 bits (449), Expect = 4.800e-50 Identity = 98/158 (62.03%), Postives = 118/158 (74.68%), Query Frame = 1
Query: 16 SPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTT--EDPTASMMRNAPGSIPVTPGTATRSADAWSKEPACCGLCACFSA 483
+PPQ+SGYL KKAKTGKWQ+RWFETNAH+LTYYK++K+EKLLAALNLPQVGEI+LVDPD E N+G+LFTIELN RVYTMKA TREEAARWVEVLK LQ M+ ++++ E P AS++R G+ P + W K+ CCG CF A
Sbjct: 7 APPQMSGYLHKKAKTGKWQRRWFETNAHFLTYYKTRKVEKLLAALNLPQVGEIKLVDPDPNDPE--NNGALFTIELNTRVYTMKAGTREEAARWVEVLKALQAMDVDDARHAGAESPHASIVRTGEGTDAPGPDS------YWRKDSKCCG---CFRA 153
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A6U4KSE8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KSE8_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.040e-29 Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 28 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQT 324
I GYL K+ K +WQKRWFETN +LTYYKS+KM+K+LAALNLPQVGEI+L+ + + + DNDG+LFTIEL RVYT++A R+ AA+WVEVL L+T
Sbjct: 25 IQGYLHKRTKDMRWQKRWFETNGCFLTYYKSRKMDKILAALNLPQVGEIKLLP--ESAADPDNDGTLFTIELKARVYTLRAPNRKNAAKWVEVLNELKT 121
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A4D9CUK8_9STRA (PH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUK8_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.400e-29 Identity = 73/147 (49.66%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 28 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPTASMMRNAPGSIPVTPGTATRSADAWSKEPACCGLC 468
+SGYL KK + G+WQKRWFETN +LTYYKSKKM KLLAAL+L QVG I+L + + EED GSLF+IELN+RVYT+KA EAA+WVEVL L+ + T T + S+ + G W K+ CCG+C
Sbjct: 17 VSGYLHKKTRDGRWQKRWFETNGCFLTYYKSKKMTKLLAALDLVQVGTIKLTEVPEPGDEEDL-GSLFSIELNERVYTLKAGNDVEAAKWVEVLNQLKVGGSDVMPTCAGNTVT------SSMEIEAGGGETE---WKKKLQCCGIC 153
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A7S2WTC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTC5_9STRA) HSP 1 Score: 117 bits (294), Expect = 6.440e-27 Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1
Query: 28 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVL 318
I GYLQKK + G+WQKRWFETN +LTYYK+KKM KLLAALNLPQVGEI+L+D S + D+ G+LF+I LNDR Y +KA+ RE+A WV L +L
Sbjct: 46 IHGYLQKKTRDGRWQKRWFETNGCFLTYYKNKKMAKLLAALNLPQVGEIKLLDTG-HSDDVDSSGALFSIALNDREYMLKAAKREDAEVWVTKLNLL 141
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A482RVG4_9ARCH (PH domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVG4_9ARCH) HSP 1 Score: 113 bits (282), Expect = 1.750e-26 Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 1
Query: 28 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVL 318
ISGYL K+ + G+WQKRWFETN YLTYYKS+KMEKLLAAL+LPQVGEI++V P+ ++ +++ LF+IELN RVY ++A + EA +WV L L
Sbjct: 9 ISGYLYKRTRDGRWQKRWFETNGVYLTYYKSRKMEKLLAALSLPQVGEIKVVLPEQDAEKQEG---LFSIELNTRVYILRAKSSAEADQWVSTLNKL 102
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A7S2DE48_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DE48_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.010e-26 Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 13 GSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTT 351
G P +GYLQKK K GKWQKRWFETN +LTYYK++KM+KLLAA+ LP+VGEI L+DP ++ + G LF+I+LN R Y +KA + EA WV K+L ++E ESK T
Sbjct: 9 GKEPYKNGYLQKKTKQGKWQKRWFETNGIFLTYYKNQKMKKLLAAVKLPEVGEISLIDPHPDNDDTVEPG-LFSIQLNSREYILKAESHPEAVEWV---KILTKLKESESKDT 117
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A7S2G8J6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8J6_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.500e-26 Identity = 56/92 (60.87%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 34 GYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVL 309
GYLQKK K+G+WQ+RWFETN +LTYYK+KKM KLLAA+NLPQVG+I +++PD E+ ++ DG F+I+LN R Y +KA+ EEA WV+VL
Sbjct: 32 GYLQKKTKSGQWQRRWFETNGVFLTYYKNKKMSKLLAAVNLPQVGDIAVMEPDAEN-DDTVDGGCFSIQLNSREYILKAADHEEALAWVKVL 122
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Match: A0A1W0A4A7_9STRA (PH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4A7_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.480e-24 Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 1
Query: 25 QISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVL 309
++ GYL KK + GKWQKRWFETN +LTYYK K+ +KLLAALNLPQVGEI L+ + E D G LFTIELNDR+YT+KA +E+AA WVE L
Sbjct: 5 ELRGYLLKKTRNGKWQKRWFETNRCFLTYYK-KQGQKLLAALNLPQVGEITLLPENTE----DGPG-LFTIELNDRIYTIKAKNQEDAALWVEAL 93 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11.877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11.877.1 >prot_Ecto-sp13_S_contig11.877.1 ID=prot_Ecto-sp13_S_contig11.877.1|Name=mRNA_Ecto-sp13_S_contig11.877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp MESGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALback to top mRNA from alignment at Ecto-sp13_S_contig11:40212..45405- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11.877.1 ID=mRNA_Ecto-sp13_S_contig11.877.1|Name=mRNA_Ecto-sp13_S_contig11.877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5194bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:40212..45405- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11:40212..45405- >mRNA_Ecto-sp13_S_contig11.877.1 ID=mRNA_Ecto-sp13_S_contig11.877.1|Name=mRNA_Ecto-sp13_S_contig11.877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=489bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:40212..45405- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |