mRNA_Ecto-sp13_S_contig11.873.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: D7G4Q8_ECTSI (Geranylgeranyltransferase type 1 beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q8_ECTSI) HSP 1 Score: 652 bits (1682), Expect = 1.340e-235 Identity = 321/339 (94.69%), Postives = 328/339 (96.76%), Query Frame = 1
Query: 79 MGFDWDKHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAGGGDWRRSGFRGGPFGMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRLR 1095
MGFDWDKH GFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTE +R TVKRWVLAQQVAGG DWRR GFRGGPFG+VAEPS RNG DDA EGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQ+EDGSFKASASDSTCDVRFTYCACAVST+LGNWSGVDRRKAA YVERC+DFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVD+ RARQFHVSCQNRIC GGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRL+
Sbjct: 1 MGFDWDKHTGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEAERATVKRWVLAQQVAGG-DWRRRGFRGGPFGVVAEPSQRNGEDDAGEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQREDGSFKASASDSTCDVRFTYCACAVSTILGNWSGVDRRKAAEYVERCYDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDDGRARQFHVSCQNRIC-GGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRLK 337
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: A0A6H5KFN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN4_9PHAE) HSP 1 Score: 496 bits (1278), Expect = 1.810e-172 Identity = 283/453 (62.47%), Postives = 289/453 (63.80%), Query Frame = 1
Query: 160 ADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAG-----------------------------------------------------------GGDWRRSGFRGGPFGMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREAC-----AGPTYCAVASLKLLGVLEKLPIPRRQGILEWCVNRQ-----------------------------------------------------------------------------GVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRLR 1095
+ +RTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAG GGDWRR GFRGGPFGMVAEPS NG+DDADEGNLAATYSALATLVALDVDLTTGVDS+AIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAA YVERC+ R AC AGPTYCAVASL LLGVLEKLPIPRRQG+LEWCVNRQ GVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSC N IC GGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMD ALGVTRRAAGRLR
Sbjct: 2 SQAKRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAGVRKIRVAVNLLDKNRRHYFLCCEEACNPIVRAQLVLLSESCIGKDSTAAMAYPMVSRVTGGDWRRRGFRGGPFGMVAEPSQGNGKDDADEGNLAATYSALATLVALDVDLTTGVDSNAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAEYVERCY-----------RHACPISHPAGPTYCAVASLNLLGVLEKLPIPRRQGLLEWCVNRQNPTRVMADSSGEFPATNLPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPLSASIALRFFGSYGSLLKGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCHNPIC-GGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDTALGVTRRAAGRLR 442
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: A0A1Y1XS44_9FUNG (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XS44_9FUNG) HSP 1 Score: 249 bits (636), Expect = 1.390e-76 Identity = 146/340 (42.94%), Postives = 199/340 (58.53%), Query Frame = 1
Query: 85 FDWDKHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQV-----AGGGDWRRSGFRGGPFGMVAEPSHRNGRDDA--DEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQE----MDAALGVT 1071
F +KH FF RSL LP QY++ADT R TL YFC+ GLDL+GKLD +E+ + W+ AQQ+ + GFRG + A D NLA TY+AL L+AL DL+ V+ AI+ ++ LQ+EDGSF D+RF YCA VS +L +W+G+D KA +++ +D GIG P +E+ G TYCAVA L LL L+ I ++ +LEWC+NRQ GFQGR NKP DSC SFW+GAT+ +L G +L+D + R F ++ Q I GGFAK P V PD+LH++ +I+ LS E G+ ++ +LGVT
Sbjct: 12 FALEKHVKFFKRSL--EFLPYQYSSADTNRMTLGYFCINGLDLLGKLDILSEEQKKGYIEWIYAQQIHPDPNSXXXXXXXCGFRGXXXXXXXXXPSATNTEAAKYDRANLAMTYTALLLLLALGDDLSR-VNRKAIIESMPYLQREDGSFCPCYESRESDMRFLYCASVVSYILNDWTGIDIPKALSFIKSSQAYDYGIGQGPSQESHGGSTYCAVAVLDLLEKLDSSVI-NQEKLLEWCLNRQETGFQGRRNKPADSCYSFWIGATIKMLGGYELIDFTQHRAFLMTTQGGI--GGFAKWPDVYPDLLHAYMAIAGLSFMNEPGINPVNPTLNCSLGVT 345
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: UPI001B8891F4 (geranylgeranyl transferase type-1 subunit beta-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8891F4) HSP 1 Score: 242 bits (618), Expect = 5.670e-74 Identity = 145/340 (42.65%), Postives = 202/340 (59.41%), Query Frame = 1
Query: 94 DKHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQV---AGGGDWRRSGFRGGP---FGMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRR-QGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRL 1092
DKH FF R+L LP ++ DT R T+A+F ++GLD++G ++ E+ + + W+ + QV A G + ++ GFRG + E + R D ++A TY+ALA+L+ L D + VD AIV LG+LQQ++GSF A S CD+RF YCA +S ML NWSG+D K Y++ ++G + PG EA GPT+C +ASL L+ L+ PR+ + + WCV RQ GFQGRPNKP D+C SFWVGATL LLD D D R + + Q+ I GGFAK P PD LH ++ + LSL GEAG+ + AAL +++RAA L
Sbjct: 9 DKHVKFFIRTLRV--LPSSLSSLDTNRMTVAFFALSGLDVLGAINVLEEEHKQMID-WIYSLQVLPHASGSNRQQCGFRGSSTLGHSYIPETA-REKLIPYDSSHIAMTYTALASLLILGDDFSR-VDRMAIVDGLGALQQDNGSFCAMPEGSECDMRFVYCATCISYMLNNWSGMDVEKTVKYIQASLTYEGALAQGPGLEAHGGPTFCGIASLILMDRLDVAFTPRQLERLKRWCVCRQQSGFQGRPNKPVDTCYSFWVGATLQLLDMFDKTDARFNRSYILETQSDI-TGGFAKWPQNSPDALHGYFGVCGLSLIGEAGLLPLHAALNISQRAADHL 342
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: K1PY80_CRAGI (Geranylgeranyl transferase type-1 subunit beta n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1PY80_CRAGI) HSP 1 Score: 241 bits (616), Expect = 9.470e-74 Identity = 140/336 (41.67%), Postives = 199/336 (59.23%), Query Frame = 1
Query: 97 KHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAG---GGDWRRSGFRGGPFGMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLE-KLPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRL 1092
KH FF R L LP +Y++ DT R T+A+F ++GLDL+ LD E ++ ++ +W+ + Q+ G + + GFRG + D G++A TY+A+A+L+ L DL+ GV+ AI+ AL +LQQEDGSF S D+RF YCA + ML +WSG++ KA +V++ ++GGIG PG EA G T+CAVA+L L+ L+ + + + WCV RQ GFQGRPNKP D+C SFWVGATL L+D L++ R F + Q I GGF+K P PD LH++ + LSL GE GV M AAL +++RA+ L
Sbjct: 12 KHIKFFERCLQI--LPSRYSSLDTNRMTIAFFALSGLDLLNSLDRI-EKEKESIIKWIYSLQILPNDTGSNICQCGFRGSSTNTGKNSQKTENKLKLDSGHIAMTYTAVASLLILGDDLS-GVNKSAILTALRNLQQEDGSFCCVPEGSENDMRFVYCAACICYMLNDWSGMNVEKAVQFVQKSQSYEGGIGQGPGLEAHGGSTFCAVAALSLMNKLKTSFSEKKLKQLQRWCVCRQQSGFQGRPNKPTDTCYSFWVGATLKLIDTYHLINSEFNRGFLMETQGSI-TGGFSKWPDHTPDALHAYLGLGGLSLLGEEGVLPMHAALNISQRASNHL 342
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: A0A8C4QG00_EPTBU (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QG00_EPTBU) HSP 1 Score: 241 bits (615), Expect = 3.120e-73 Identity = 144/339 (42.48%), Postives = 192/339 (56.64%), Query Frame = 1
Query: 97 KHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAGG---GDWRRSGFRGGPF-------GMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEK-LPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRA 1080
+H FF R L LP + +T R T+A+F ++GLD++G LD E DR +V RWV + QV + GFRG + + E +H D ++ TY+ LATL+ L DL+ GV+ A V L +LQ DGSF A S D+RF YCAC + ML +WSG+DR KA ++ R +DGG G PG E+ G T+CA+ASL L+G L L P + WC+ RQ GFQGRPNKPED+C SFW+G TL LL D + R F +S Q+ + GGFAK P PD LHS+ + LSL GE G+Q ++ AL V++RA
Sbjct: 24 RHVAFFSRCLT--ALPDSFAYLETSRLTIAFFAISGLDILGALD---EVDRESVIRWVYSLQVLPDRHESNLHNCGFRGSSYLGVTAGNALATEFAH-----PYDSAHITMTYTGLATLLILGDDLS-GVNKKACVAGLRALQLSDGSFCAVPEGSENDMRFVYCACCICYMLADWSGIDRDKATDFICRSMSYDGGFGQGPGLESHGGSTFCAIASLHLMGRLATALSEPALWAVRRWCIFRQQSGFQGRPNKPEDTCYSFWLGGTLQLLGLFYCTDVKKNRHFIMSTQDNV-VGGFAKWPDSHPDALHSYLGLCGLSLLGEPGLQSLNPALNVSKRA 350
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: A0A6A4WQ98_AMPAM (Geranylgeranyl transferase type-1 subunit beta n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WQ98_AMPAM) HSP 1 Score: 240 bits (612), Expect = 3.550e-73 Identity = 145/335 (43.28%), Postives = 199/335 (59.40%), Query Frame = 1
Query: 79 MGFDWDKHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAG---GGDWRRSGFRGGPFGMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEK-LPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVT 1071
M F +HA +F + +P +YT+ DT R TL ++ V+GLDL+G+LD D+ +V WV QQ+ GD R+GFRG P P ++ D ++ TY+ALATL+ L DL+ VD A++ L +LQ DGS +S D+RF YCA AVS ML +WSG+DR K YV R +D GI P E+ G T+CAVA+L L+G L+ L +R G++ WC++RQG+GF GRPNK EDSC +FW+GA+L LLD V R+F S Q+ I GG +K PG D LH++ IS LSLAG+ G++ + AAL V+
Sbjct: 2 MEFLHKRHARYFKFCM--DSIPGEYTSLDTSRMTLLFYAVSGLDLLGQLDLV--QDKQSVIEWVYRQQITSELCDGDLSRAGFRGSPANSSGAPLNQ-----WDCSHVTMTYTALATLLVLGDDLSR-VDRAALLSGLRALQLPDGSSLSSLHGGESDMRFVYCAAAVSYMLDDWSGMDREKTREYVLRSMRYDHGISQGPLLESHGGSTFCAVATLALMGELDSALTEQQRDGLVFWCLSRQGLGFNGRPNKQEDSCYTFWIGASLRLLDAYQFVRTDLLREFVYSTQDPI-TGGLSKWPGHGADPLHTYLGISGLSLAGQEGLKPIHAALNVS 325
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: A0A8B8DPT3_CRAVI (Geranylgeranyl transferase type-1 subunit beta n=3 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DPT3_CRAVI) HSP 1 Score: 240 bits (613), Expect = 3.800e-73 Identity = 138/337 (40.95%), Postives = 197/337 (58.46%), Query Frame = 1
Query: 97 KHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVA---GGGDWRRSGFRGGPFGMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRR-QGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRLR 1095
KH FF R L LP +Y + DT R T+A+F ++GLDL+ L+S E + + W+ + Q+ G + + GFRG + D G++A TY+A+A+L+ L DL+ V+ A++ AL SLQQ+DGSF S D+RF YCA + ML +WSG+D+ KA ++++ ++GGIG P EA G T+CA+A+L L+ LE P+R + + WC+ RQ GFQGRPNKP D+C SFWVGATL L+D L + R F + Q I GGF+K P PD LH++ + LSL GE GV M AAL +++RA+ L+
Sbjct: 24 KHIKFFERCLHI--LPSRYCSLDTNRMTIAFFALSGLDLLNALESI-EKQKNHIVEWIYSLQILPNKDGSNIHQCGFRGSSTNTGKNSQKTENKLKLDSGHIAMTYTAIASLLILGDDLSR-VNKTAVLTALRSLQQDDGSFCCVPEGSENDMRFVYCAACICYMLNDWSGIDQEKAVEFIQKSQSYEGGIGQGPDLEAHGGSTFCAIAALALMNKLETCFTPKRFRQLQRWCICRQQTGFQGRPNKPTDTCYSFWVGATLKLIDIYHLTNFECNRGFLMETQGSI-TGGFSKWPDHTPDTLHAYLGLGGLSLLGEEGVLPMHAALNISQRASEHLK 355
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: A0A0A0KNR1_CUCSA (Geranylgeranyl transferase type-1 subunit beta n=7 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KNR1_CUCSA) HSP 1 Score: 239 bits (610), Expect = 1.070e-72 Identity = 141/367 (38.42%), Postives = 205/367 (55.86%), Query Frame = 1
Query: 37 LLRISATTPTFVLSMGFDWDKHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAGGGDWRRS-----GFRGGPFGMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRRQG--------ILEWCVNRQGV--GFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRL 1092
LL S+T S GFD D+H F ++ LP QY T + TLAYF ++GLDL+G +D D+ + WVL+ Q ++ GF G P NG + +LA+TY AL L + D + ++S++I ++ +LQQ DGSF + D+RF YCA A+ ML NWSG+DR+K Y+ C +DGG G+ PG E+ G TYCA+ASL+L+G +E P+ R +LEWC+ +Q GFQGRPNKP D+C +FW+G+TL +L GLDL+D+ + F ++CQ++ GGF+K P PD+ HS+Y + SL E + + LG+T +A R+
Sbjct: 7 LLEDSSTPSPSSSSSGFDRDRHVMFLE--MMYQLLPFQYQTQEINHLTLAYFVISGLDLLGAMDRV---DKDKIANWVLSFQALPTNKAEKTTGELYGFCGSRSSQF--PPDENGDLIHNGSHLASTYCALVILKVIGYDFSN-INSESIAISMRNLQQSDGSFVPIHIGAEADLRFVYCAAAICYMLENWSGMDRQKTKTYILNCQSYDGGFGLTPGSESHGGGTYCAIASLRLMGFIEDDPLSRDNPSSIINVPLLLEWCLQKQAADGGFQGRPNKPADTCYAFWIGSTLRILGGLDLIDKKALKAFLLTCQSKY--GGFSKFPMDFPDLYHSYYGFTAFSLLEEPDINSLFVELGITDVSAWRI 363
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Match: UPI0014555ED7 (geranylgeranyl transferase type-1 subunit beta-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014555ED7) HSP 1 Score: 239 bits (609), Expect = 1.900e-72 Identity = 147/364 (40.38%), Postives = 207/364 (56.87%), Query Frame = 1
Query: 43 RISATTPTFVLSMGFDWDKHAGFFHRSLLNPGLPRQYTTADTQRTTLAYFCVTGLDLIGKLDSCTEDDRTTVKRWVLAQQVAGGGDW-----RRSGFRGG--------PFGMVAEPSHRNGRDDADEGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAGYVERCHDFDGGIGMAPGREACAGPTYCAVASLKLLGVLEKLPIPRRQG-ILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDEARARQFHVSCQNRICAGGFAKAPGVPPDMLHSFYSISWLSLAGEAGVQEMDAALGVTRRAAGRL 1092
R T T + F KH FF R L LP+ YT+ DT R T+ +F ++GLD+I LD E ++ + W+ + QV + + GFRG P + SHR D G++A TY+ L++L+ L DL+ V+ A+V L +LQ EDGSF A+ + S D+RF YCAC +S++L NW+G+D KAA Y+ + +D G+G PG+E G T+CAVASL L+G L+ R+Q I WC+ RQ GFQGRPNKP D+C SFWVGATL LL+ + VD + R F +S Q+ GGFAK PD LH+++ + LSL GE + + +L +++RAA L
Sbjct: 5 RAEKTQQTNKKEISFLRAKHIKFFSRCLQI--LPQSYTSLDTSRLTVCFFALSGLDVIDSLD-VVEKEKQDIIDWIYSLQVLPDPNHYEESSKHCGFRGSATLGTPYNPSMSIPSESHRY-----DWGHIAMTYTGLSSLLILGDDLSR-VNKPAVVAGLKALQLEDGSFAATLNGSENDMRFIYCACCISSILNNWNGIDTNKAAEYIHKSLSYDFGLGQGPGQEGHGGTTFCAVASLVLMGRLDSTFNKRQQERIKSWCIKRQHSGFQGRPNKPVDTCYSFWVGATLKLLNAYEFVDFSCNRGFILSTQDDT-VGGFAKWTDYHPDALHAYFGVCGLSLMGEPNILPISPSLNISQRAADHL 358 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11.873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11.873.1 >prot_Ecto-sp13_S_contig11.873.1 ID=prot_Ecto-sp13_S_contig11.873.1|Name=mRNA_Ecto-sp13_S_contig11.873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp RASCLCLLACLRLLRISATTPTFVLSMGFDWDKHAGFFHRSLLNPGLPRQback to top mRNA from alignment at Ecto-sp13_S_contig11:16296..21625- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11.873.1 ID=mRNA_Ecto-sp13_S_contig11.873.1|Name=mRNA_Ecto-sp13_S_contig11.873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5330bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:16296..21625- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11:16296..21625- >mRNA_Ecto-sp13_S_contig11.873.1 ID=mRNA_Ecto-sp13_S_contig11.873.1|Name=mRNA_Ecto-sp13_S_contig11.873.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1095bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11:16296..21625- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |