mRNA_Ecto-sp13_S_contig10988.868.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: D7FQ58_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ58_ECTSI) HSP 1 Score: 313 bits (801), Expect = 2.520e-95 Identity = 161/180 (89.44%), Postives = 167/180 (92.78%), Query Frame = 1
Query: 4 QASYPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARERPPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQ 543
+ASYPLTFSPVRAT+QDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARER + + + KDMEFAVDSDLPGVSGSPGL VPAKQE EY+LSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQ
Sbjct: 2643 KASYPLTFSPVRATDQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARER--VEQVFQLKNVTGKDMEFAVDSDLPGVSGSPGLTVPAKQEEEYSLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQ 2820
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: A0A835Z976_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z976_9STRA) HSP 1 Score: 165 bits (418), Expect = 7.850e-44 Identity = 95/199 (47.74%), Postives = 118/199 (59.30%), Query Frame = 1
Query: 40 ATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARERPPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFT-----------APGGI------------VVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQARETDGTP 567
A E +KLVL D K GKPV +F LRG AEEPLAE HRV+ C+AR+ + P R F + + + ++DLPGVSG+ L VPA E Y L +CPPFGG FTGSLTFT A GG VWYT+EVQA++P EED + + T LR A+ VEISL+NPL+E+L+F V LQ G P
Sbjct: 1967 ALECGDTAKLVLCDEKSLGKPVTVEFVLRGAAEEPLAEEHRVIACAARQS--AAERFPVRNAFPRAITYRAETDLPGVSGAATLSVPAHGEGFYDLVVCPPFGGTFTGSLTFTPLPPQATRASVAVGGXXXXXXXVGIEGCAVWYTIEVQAASPQEEDTIEVRTPLRTALGVEISLTNPLSEQLEFEVVLQGEGVMGEP 2163
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: F0XXK4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXK4_AURAN) HSP 1 Score: 144 bits (362), Expect = 2.630e-36 Identity = 82/188 (43.62%), Postives = 111/188 (59.04%), Query Frame = 1
Query: 4 QASYPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARERPPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQARETDGTP 567
+AS+PLTF+P ++ +KL L + + P F++ L G E PLAEGH V+RC+ARE + SK + + V+SDLP VSG+ + VPA A Y L I P GG +TGS+TF+ P G VWYT++VQ +P+EE + IST +R A S ISL+NPL E + F V LQ G P
Sbjct: 2538 RASFPLTFAPTWTGVEN--AKLTLRNARS---PDAFEYTLVGEGEPPLAEGHEVLRCNARET--TTHGFLLENASSKPLSYKVESDLPFVSGASTIDVPANSSATYDLKISPSLGGAYTGSVTFSPPTGEYVWYTIKVQVDSPLEESAIDISTTVRMAASARISLTNPLPEAIDFDVILQGDGLIGEP 2718
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: A0A7S3XJ69_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJ69_HETAK) HSP 1 Score: 125 bits (313), Expect = 9.970e-33 Identity = 68/144 (47.22%), Postives = 87/144 (60.42%), Query Frame = 1
Query: 136 EEPLAEGHRVVRCSARERPPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQARETDGTP 567
EEPLAEGH + C ARE+ + R F V+SD+ V G + + A+ A Y L I P GG +TGSLTF AP G +WYT+E+ S P EED + + TV+RQAVSVEI+LSNPL+EELQF V ++ G P
Sbjct: 1 EEPLAEGHTAIACKAREK--VKHVFEVRNYSPAAQTFEVESDMLNVQGPSRVAIGARAVAPYELEISPQSGGTYTGSLTFKAPSGEYMWYTMELTVSAPAEEDTIELRTVVRQAVSVEITLSNPLDEELQFDVLIRGEGLLGDP 142
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: A0A7S1XZV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZV1_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.130e-31 Identity = 74/189 (39.15%), Postives = 106/189 (56.08%), Query Frame = 1
Query: 1 NQASYPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARERPPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQARETDGTP 567
+Q Y L+F P T + KLVL + + + F +DL G EEPLAEGH V+ C+ARE + R + F V+SDLP SG+P + + E+EY LSICP GG +TGS+T T G W+T+E+ P ED++ + + +R+AV V+I ++NPL+EEL F V + G P
Sbjct: 406 SQVDYELSFRPAWITNVE--GKLVLRNPQTNDE---FVYDLVGVGEEPLAEGHAVISCNAREA--VEHRIKVRNFSKTEDTFEVESDLPYASGAPSITLGPGAESEYVLSICPQLGGTYTGSVTLTPSSGEYQWFTIEIHTGAPHPEDELEVGSEVRRAVGVDIVIANPLDEELTFDVYMNGPGLLGDP 587
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: A0A8J2SD40_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SD40_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.840e-29 Identity = 70/190 (36.84%), Postives = 107/190 (56.32%), Query Frame = 1
Query: 7 ASYPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARERPPLSSPNPERPLFS-----KDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQARETDG 561
A YP+T++P E+ +KLVL K F++ L G+AEEPLAE H V++C ARE P R +F K + V++DLP VSG+ ++VP + ++ L+ P GG +TG++TF + G +W+TVEV +P+ + + + TV R+A S I+L NPL+EE+ F V + G
Sbjct: 2423 AHYPITYAPSWVGEEK--AKLVLKQAKSSDS---FEYQLEGSAEEPLAEDHVVLQCHARE--------PHRHIFQLKGGPKPTTYTVEADLPFVSGANEVQVPGNKTVDFPLTFTPALGGKYTGAVTFKSAQGTFIWWTVEVHVESPLADQAIDMQTVARKACSAGITLVNPLDEEIAFDVVCEGDGVSG 2599
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: W7WVU8_TETTS (Flagellar associated protein, putative n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=W7WVU8_TETTS) HSP 1 Score: 122 bits (306), Expect = 8.610e-29 Identity = 65/178 (36.52%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 1 NQASYPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARERPPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMV 534
+Q S+PLTF P E + KL+L + F+++++G EEP+AE H V++CSAR+ + + P KD+ + V++DL G+P LK+ A Q+ Y LS+ P G +TGS+TFT G +WYTV + ++P + + +++ +RQA + EIS+SNPL++++ F V
Sbjct: 2399 SQGSFPLTFKPKWICEAE--CKLILQNPLTNDL---FEYNIKGFGEEPVAEDHFVIQCSARQTK-IHDIVVKNPYTDKDVTYKVETDLLNAQGAPSLKIKAGQKGTYKLSVTPILSGQYTGSITFTEDDGTYLWYTVVLLTASPAADKVLDLNSFIRQACTFEISISNPLDQQISFDV 2570
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: A0A7S0T6H2_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T6H2_9CHLO) HSP 1 Score: 120 bits (302), Expect = 2.950e-28 Identity = 73/185 (39.46%), Postives = 97/185 (52.43%), Query Frame = 1
Query: 13 YPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARERPPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQARETDGTP 567
YPL+F P E +V L L + + LRG A+EPLAE H V+ AR P K + + V SDLP VSGSP A Y L + PP GV GSLTFTAP G VW+T+EV AS+P E+ + + +R+AV+V+I+L+NPL+ F VS++ G P
Sbjct: 2163 YPLSFKPGWTGE--YVGTLTLQTSTHESNA----YALRGVADEPLAESHVVITAQARGETSYRLTVPNVYAAEKSVTYNVFSDLPFVSGSPQCTAKAGGTGVYELGVIPPSSGVMHGSLTFTAPNGHYVWFTLEVHASSPPAEEALVLEVAVRRAVTVQITLANPLDIAATFQVSMEGHGLLGAP 2341
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: A0A2R5GBW7_9STRA (Cilia-and flagella-associated protein 65 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBW7_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.960e-28 Identity = 74/190 (38.95%), Postives = 107/190 (56.32%), Query Frame = 1
Query: 7 ASYPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARER--PPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAKQEAEYTLSICPPFGGVFTGSLTFT-APGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQARETDGTP 567
A + L F+P E F KL+L + + + L G +EPLAE H V+ C ARE+ + N FAV+SDLP V G P + V A+Y L++ P GG +TGS+TF+ P +WYTVE++A++P ED + I+T +R+AV+VEI+L NPL++ ++F VSLQ G P
Sbjct: 2506 ADFTLEFAPTWVGE--FSGKLILHNATTNEDMI---YVLSGVGQEPLAEDHIVIECKAREKVFQAFAVSNNFGSCSDVYTTFAVESDLPHVGGDPTISVAKGASADYMLTVNPLLGGTYTGSVTFSLGPERPFLWYTVEIRATSPAPEDTLEITTFVRKAVAVEITLVNPLDQAVEFEVSLQGHGLLGEP 2690
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Match: A0A7S2JQH0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JQH0_9EUKA) HSP 1 Score: 118 bits (296), Expect = 1.630e-27 Identity = 74/189 (39.15%), Postives = 107/189 (56.61%), Query Frame = 1
Query: 13 YPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAEGHRVVRCSARERPPLSSPNPERPLFSKDMEFAVDSDLPGVSGSPGLKVPAK------------QEAEYTLSICPPFGGVFTGSLTFTAPGGIVVWYTVEVQASNPMEEDKVAISTVLRQAVSVEISLSNPLNEELQFMVSLQ 543
YPL F+P E++ +L L ++ K + + L+GTAEEPLAEG+ V+ C+AR+ ++ + ++SDL VSG +KVP + +A+YTL+ P GG GS+TFTAP G +WYTVEV A P E K++IS LR+ V+VEI +SNP + EL+F V +Q
Sbjct: 60 YPLDFAPEWMCEKE--GELTLNNMSTGDK---YMYTLKGTAEEPLAEGNVVIECAARQPTQVAFEVFNVMGSGEATSLTIESDLLHVSGPSDVKVPRRVGSLARGEPDQSSKAQYTLTANPQLGGDLRGSITFTAPDGRYLWYTVEVHAEPPPCEKKLSISAPLRKVVAVEIPISNPTSIELEFSVMIQ 243 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10988.868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10988.868.1 >prot_Ecto-sp13_S_contig10988.868.1 ID=prot_Ecto-sp13_S_contig10988.868.1|Name=mRNA_Ecto-sp13_S_contig10988.868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp NQASYPLTFSPVRATEQDFVSKLVLADLKDKGKPVKFDFDLRGTAEEPLAback to top mRNA from alignment at Ecto-sp13_S_contig10988:3920..5596+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10988.868.1 ID=mRNA_Ecto-sp13_S_contig10988.868.1|Name=mRNA_Ecto-sp13_S_contig10988.868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1677bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10988:3920..5596+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10988:3920..5596+ >mRNA_Ecto-sp13_S_contig10988.868.1 ID=mRNA_Ecto-sp13_S_contig10988.868.1|Name=mRNA_Ecto-sp13_S_contig10988.868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=567bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10988:3920..5596+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |