mRNA_Ecto-sp13_S_contig10982.862.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10982.862.1
Unique NamemRNA_Ecto-sp13_S_contig10982.862.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: D8LCR9_ECTSI (NF-X1 finger and helicase domain protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR9_ECTSI)

HSP 1 Score: 900 bits (2326), Expect = 7.600e-305
Identity = 516/677 (76.22%), Postives = 542/677 (80.06%), Query Frame = 1 
Query:    1 AREVLPFADTLLPPSAASAAGATARDATEPKPPRNCLGGNAEAPLDALRSVSMLDRERFPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRMLSHWRGPIMCVCLTNHALDQFLCDLLDAGVDGIWADGVTAITANFRDANWSTTEVLHRLLVSHAPPVFEEAIINGNKHPVVDEDGWQTVGKMPSGIKDWLAGKNPADEVSGAMTNHDDNDRTRRKARLPDAQDDKVAGTNERKRRSQQRALDRRAAATVPYPDARRGAGAASSISVPSEPLPSADGTRAGESKQTTEDLDDDDRVAAGKETAYANSGATKQGEDHIATGMARSVAAGNPWLALANLNHDSSGESSDYSSMPGGEPAFDLFDVEAEPKNTTSGGGVNDDGTSWWSFANSGLAPMADGEGWEMFESEETDDDEEGHVDGGHLEAKGNSPSCETHPDGVHPPAALPPTPATSGAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVHVRVAAGPDDVGGPGFGAGRGKRDDAEMKTGERSVGNSEGXXXXXXXXXXXXXXXXXXXXXXXXXXEXXXETDSVASSMSEDPQSESXXXEXXXDGSSEEGDPGDTRPTPPAGAVDGLNDYDIIVSAVVNGRSVWALSPEERRTLCRHWQQTEAEASRERLARMIEE 2031
            AREVLPFADTLLPPSAA+AAGATAR+A EPKPP    GGNAEA LDALRSVSMLDRERFPMTELL+HTTLDQAQLEAL AALS EVALIQGPPGTGKT+VGAKVVRLLLTNRRML HW GPIMCVCLTNHALDQFLCDLLDAGVDGIWA  VTAITANFRDAN S TE LHRLLV+HAP VFEEAI+NG+K+PVVDEDGWQTVGKM SGIKDWLAGK          TNHD + RT RKA LPDAQ  KV GT E KRR QQRALDRR AAT P PDARRGAGAASS+S+PSEPLPSAD TRAGES QTTEDLDDDD VA GKE+A A+  AT QGEDHIATG+ARSVAAGNPWLALA+LN+DSSG SSD SSM GGE  FDLF+V AEPKNT SGGGV+DDGTS WSFANSGLAPMADG+  EMFESEETD DE GHVDGGHLEAKG SPS ETH DGVHPPAALPPTPATSGA+                                 VHVR AAGPDD+GGP FGAGRGKRDD EMK GE S+GNSEG                    XXXXXX XXX  D VASSMSED QSESXXX XXX GSSE+GDP D  PTPPAGAVDGLN Y+IIVSAV+NGRSVWALSPEERRTLC HWQQTEA ASRERLA MIE+
Sbjct:  591 AREVLPFADTLLPPSAAAAAGATAREAIEPKPPSPTRGGNAEASLDALRSVSMLDRERFPMTELLEHTTLDQAQLEALCAALSHEVALIQGPPGTGKTYVGAKVVRLLLTNRRMLGHWTGPIMCVCLTNHALDQFLCDLLDAGVDGIWAGEVTAITANFRDANRSNTEALHRLLVNHAPLVFEEAIVNGSKNPVVDEDGWQTVGKMSSGIKDWLAGK----------TNHDVSGRTLRKASLPDAQGGKVVGTKETKRRDQQRALDRRPAATAPCPDARRGAGAASSVSLPSEPLPSADVTRAGESTQTTEDLDDDDVVAEGKESAGADFRATNQGEDHIATGIARSVAAGNPWLALADLNYDSSGGSSDCSSMSGGESTFDLFEVAAEPKNTLSGGGVSDDGTSSWSFANSGLAPMADGDEREMFESEETDYDEAGHVDGGHLEAKGTSPSSETHADGVHPPAALPPTPATSGARHQPQNHHQQHEEHARRFAPGRGWSGHGRGHGTAVHVRFAAGPDDIGGPEFGAGRGKRDDVEMKAGETSLGNSEGGGSSLDEDDDGHGGSTSDGQXXXXXXXXXXXXDYVASSMSEDAQSESXXXXXXXXGSSEQGDPADASPTPPAGAVDGLNAYNIIVSAVLNGRSVWALSPEERRTLCHHWQQTEAAASRERLAGMIED 1257
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: A0A6H5JVS9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS9_9PHAE)

HSP 1 Score: 718 bits (1853), Expect = 7.610e-249
Identity = 442/627 (70.49%), Postives = 463/627 (73.84%), Query Frame = 1 
Query:  157 MLDRERFPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRMLSHWRGPIMCVCLTNHALDQFLCDLLDAGVDGI-----------------------------------------WADGVTAITANFRDANWSTTEVLHRLLVSHAPPVFEEAIINGNKHPVVDEDGWQTVGKM--PSGIKDWLAGKNPADEVSGAMTNHDDNDRTRRKARLPDAQDDKVAGTNERKRRSQQRALDRRAAATVPYPDARRGAGAASSISVPSEPLPSADGTRAGESKQTTEDLDDDDRVAAGKETAYANSGATKQGEDHIATGMARSVAAGNPWLALANLNHDSSGESSDYSSMPGGEPAFDLFDVEAEPKNTTSGGGVNDDGTSWWSFANSGLAPMADGEGWEMFESEETDDDEEGHVDGGHLEAKGNSPSCETHPDGVHPPAALPPTPATSGAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVHVRVAAGPDDVGGPGFGAGRGKRDDAEMKTGERSVGNSEGXXXXXXXXXXXXXXXXXXXXXXXXXXEXXXETDSVASSMSEDPQSESXXXEXXXDGSSEEGDPGDTRPTPPAGAVDGLNDYDIIVS 1908
            MLD+ERFPMTELL+HTTLDQAQLEALRAAL +EVALIQGPPGTGKT+VG KVVRLLLTNRRMLSHW+GPIMCVCLTNHALDQFLCDLLDAGVDGI                                         WA GVTAITANFRDANWSTTEVLHRLLV HAPPVFEEAI+NGNK+PVVDED WQTV +   PSG++        A E+SGAMTNHDDN RT RKA LPDAQD  VAGT ERKRR Q+RALDRR AATVPYPDARRGAGAAS  S PSEPLPSAD T AGESKQTTEDL+DDD VA GKE+A ANS AT QGE HIATG+ARSVAAGNPWLALA+LNHDSSG+SSDYSSM GGEPAFDLFD  AEPK T SGGGVNDDGTS WSFANSGLAPMADGE WEMFESE+TD+D+EGHVDGGHLEAKG SPS ET PDGVHPPAALPPTPAT GAQQ    XXXXXXXXXXXXXXXXXXXXXX                             RDDAEMK GE  V NSE                           +   ETDSVASSMSED     XXX XXX GSSEEGDPGDTRPTPPAGAV GLNDYDIIVS
Sbjct:    1 MLDQERFPMTELLEHTTLDQAQLEALRAALCQEVALIQGPPGTGKTYVGTKVVRLLLTNRRMLSHWKGPIMCVCLTNHALDQFLCDLLDAGVDGIVSNSDLILFFRYTLEDSCGKEMYRLRNMMKQLSDDMRDEWEWAGGVTAITANFRDANWSTTEVLHRLLVRHAPPVFEEAIVNGNKNPVVDEDDWQTVRRKNKPSGVR--------AKEISGAMTNHDDNGRTLRKASLPDAQDGDVAGTKERKRRDQRRALDRRDAATVPYPDARRGAGAASLFSAPSEPLPSADDTCAGESKQTTEDLEDDDGVAEGKESADANSRATNQGEHHIATGIARSVAAGNPWLALADLNHDSSGDSSDYSSMSGGEPAFDLFDAVAEPKGTISGGGVNDDGTSPWSFANSGLAPMADGEEWEMFESEDTDNDKEGHVDGGHLEAKGTSPSSETRPDGVHPPAALPPTPATFGAQQQRQNXXXXXXXXXXXXXXXXXXXXXXAPF--------------------------RDDAEMKAGETLVPNSEEGGSRLDEDDEGHWSSTSDGLEQGSGNDGEEETDSVASSMSEDAXXXXXXXXXXXXGSSEEGDPGDTRPTPPAGAVHGLNDYDIIVS 593
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: A0A388MBT3_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MBT3_CHABU)

HSP 1 Score: 109 bits (273), Expect = 7.520e-21
Identity = 58/98 (59.18%), Postives = 69/98 (70.41%), Query Frame = 1 
Query:  175 FPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRMLSHWR---------GPIMCVCLTNHALDQFLCDLLDAGVDGI 441
            FP+ ELL H+TLD+AQ EA+RAAL++EVALIQGPPGTGKT++G K+V LLL N    S             PI+CVC TNHALDQFL  L+D GV  I
Sbjct: 1249 FPLEELLKHSTLDRAQAEAVRAALTQEVALIQGPPGTGKTYIGTKLVSLLLHNASSSSSLPYGPRTGPQIEPILCVCYTNHALDQFLEGLMDQGVKRI 1346
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: A0A5J5ERA2_9PEZI (C3H1-type domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5ERA2_9PEZI)

HSP 1 Score: 109 bits (272), Expect = 8.950e-21
Identity = 94/283 (33.22%), Postives = 131/283 (46.29%), Query Frame = 1 
Query:   13 LPFADTLLPPSAASAAGATARDATEPKPPRNCLGGNAEAPLDALRSVSMLDRERFPMTELLD----------HTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRMLSHWRGPIMCVCLTNHALDQFLCDLLDAGVDGIWADGV----------TAITA------------NFRDANWSTTEV---LHRLLVSHAPPVFEEAII---------NGNK-HPV------------VDEDGWQTVGKMPSG--IKDWLAGKNPADEVSGAMT 684
            +PF D L P + +     T RD     PP   +       LD    +S + ++  P+   L+          HTTLD+ Q E+L + LS+E+AL+QGPPGTGK++VG +VV++L+ NR  L    GP++CVC TNHALDQFL  LLDAGVD +   G           T I A            N  + N    E+   L  LL   + P+    I+          G++ H +            VDEDG+Q VG+      ++ W  GKNP      A T
Sbjct:  566 MPFTDWLAPSTNSQF---TIRDGLVQVPPPLYMSEKRGVSLD----LSCIAKDGHPLRFSLEQPATVEALERHTTLDRGQCESLISCLSRELALVQGPPGTGKSYVGLQVVKVLMRNRDQLK--LGPLICVCYTNHALDQFLEHLLDAGVDNVIRLGSRSQSERLQERTLIKARSGQIKTRVEKHNIWECNQGLDEIQTELEPLLERSSRPLTYADIVYYLQKISQTKGDRTHDILFAGATDGPGGGVDEDGFQVVGRKTRKDILQSWTRGKNPPGHQPMAQT 839
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: A0A7K6H4E5_9PASS (ZNFX1 protein (Fragment) n=1 Tax=Malurus elegans TaxID=720584 RepID=A0A7K6H4E5_9PASS)

HSP 1 Score: 108 bits (269), Expect = 2.030e-20
Identity = 64/139 (46.04%), Postives = 83/139 (59.71%), Query Frame = 1 
Query:  136 DALRSVSMLDRERFPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRML--SHWRGPIMCVCLTNHALDQFLCDLLDAGVDGIWADGVTAITANFRDANWSTTEVLHRLLVSHAPPVF 546
            D LRSV +LD  ++   E L    LD +Q++AL  AL+KE+A+IQGPPGTGKT+VG K+V+ LLTN  M   ++W GPI+ VC TNHALDQFL  +L    DGI            R    S++  LHR  +     VF
Sbjct:  568 DTLRSVCVLDPNQWLSMEALK---LDDSQIQALNLALTKELAIIQGPPGTGKTYVGLKIVQALLTNASMWQRTYWSGPILIVCYTNHALDQFLEGILSFQRDGI-----------VRVGGRSSSLALHRCTLKELRKVF 692
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: D5GC44_TUBMM (Uncharacterized protein n=1 Tax=Tuber melanosporum (strain Mel28) TaxID=656061 RepID=D5GC44_TUBMM)

HSP 1 Score: 107 bits (268), Expect = 2.660e-20
Identity = 53/89 (59.55%), Postives = 68/89 (76.40%), Query Frame = 1 
Query:  175 FPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRMLSHWRGPIMCVCLTNHALDQFLCDLLDAGVDGI 441
            F M EL  HTTLD+ Q +A+ A LS+E++LIQGPPGTGK+++G ++V++LL NR  L    GPI+CVC TNHALDQFL DLLD G+  I
Sbjct:  540 FRMEELEAHTTLDRGQCQAMIACLSQELSLIQGPPGTGKSYLGVQIVKVLLANR--LETKIGPIICVCYTNHALDQFLGDLLDEGITNI 626
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: A0A1L9RSV8_ASPWE (Uncharacterized protein n=1 Tax=Aspergillus wentii DTO 134E9 TaxID=1073089 RepID=A0A1L9RSV8_ASPWE)

HSP 1 Score: 107 bits (268), Expect = 2.730e-20
Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 1 
Query:  148 SVSMLDRERFPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRMLSHWRGPIMCVCLTNHALDQFLCDLLDAGVDGIWADGVTAITANFRD 483
            ++S+ D      T L + TTLD  Q  A+ +AL  EVALIQGPPGTGK+FVG ++ R+LL+NR +L    GPI+CVC TNHALDQFL +LLD+GV  I   G  + +A   +
Sbjct:  670 AISVSDDPHSLSTHLSEVTTLDHGQAVAMVSALKHEVALIQGPPGTGKSFVGIQLARVLLSNRDLLG--LGPILCVCYTNHALDQFLHELLDSGVSNIARIGSPSTSARLEE 779
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: A0A7L3HGW4_9PASS (ZNFX1 protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7L3HGW4_9PASS)

HSP 1 Score: 107 bits (266), Expect = 4.710e-20
Identity = 56/103 (54.37%), Postives = 75/103 (72.82%), Query Frame = 1 
Query:  136 DALRSVSMLDRERFPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRML-SHWRGPIMCVCLTNHALDQFLCDLLDAGVDGI 441
            D+L+SV +LD +++   E L    LD++Q++AL  AL+KE+A+IQGPPGTGKT+VG K+V+ LLTN  +  S WR PI+ VC TNHALDQFL  +L    DGI
Sbjct:  618 DSLKSVCILDPDQWVSMEALK---LDESQMQALNLALTKELAIIQGPPGTGKTYVGLKIVQALLTNDHVWQSTWRSPILIVCYTNHALDQFLEGILSFQNDGI 717
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: A0A436ZXJ8_9PEZI (Uncharacterized protein n=1 Tax=Arthrobotrys flagrans TaxID=97331 RepID=A0A436ZXJ8_9PEZI)

HSP 1 Score: 106 bits (265), Expect = 5.190e-20
Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 1 
Query:  175 FPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRMLSHWRGPIMCVCLTNHALDQFLCDLLDAGVDGI 441
            F +  LL++TTLD  Q ++L  ALS+EV LIQGPPGTGK+FVG K+V++LL N+       GP++CVC TNHALDQFL  LLD G+D I
Sbjct:  555 FDIQILLENTTLDDGQAQSLVKALSREVGLIQGPPGTGKSFVGTKIVKVLLANKTKAD--LGPVVCVCYTNHALDQFLEHLLDIGIDNI 641
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BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Match: A0A8C5UAN8_9PASS (Zinc finger NFX1-type containing 1 n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5UAN8_9PASS)

HSP 1 Score: 106 bits (265), Expect = 6.220e-20
Identity = 63/137 (45.99%), Postives = 80/137 (58.39%), Query Frame = 1 
Query:  136 DALRSVSMLDRERFPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFVGAKVVRLLLTNRRMLSHWRGPIMCVCLTNHALDQFLCDLLDAGVDGIWADGVTAITANFRDANWSTTEVLHRLLVSHAPPVF 546
            D LRSV +LD  ++   E L    LD +Q++AL  AL+KE+A+IQGPPGTGKT+VG K+V+ LLTN  M     GPI+ VC TNHALDQFL  +L    DGI            R    S++  LHR  +     VF
Sbjct:  633 DTLRSVCVLDPNQWLSMEALK---LDDSQIQALNLALTKELAIIQGPPGTGKTYVGLKIVQALLTNASMWQRTYGPILIVCYTNHALDQFLEGILSFQRDGI-----------VRVGGRSSSLALHRCTLKELRKVF 755
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10982.862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCR9_ECTSI7.600e-30576.22NF-X1 finger and helicase domain protein, putative... [more]
A0A6H5JVS9_9PHAE7.610e-24970.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A388MBT3_CHABU7.520e-2159.18Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A5J5ERA2_9PEZI8.950e-2133.22C3H1-type domain-containing protein n=1 Tax=Sphaer... [more]
A0A7K6H4E5_9PASS2.030e-2046.04ZNFX1 protein (Fragment) n=1 Tax=Malurus elegans T... [more]
D5GC44_TUBMM2.660e-2059.55Uncharacterized protein n=1 Tax=Tuber melanosporum... [more]
A0A1L9RSV8_ASPWE2.730e-2050.89Uncharacterized protein n=1 Tax=Aspergillus wentii... [more]
A0A7L3HGW4_9PASS4.710e-2054.37ZNFX1 protein (Fragment) n=3 Tax=Passeriformes Tax... [more]
A0A436ZXJ8_9PEZI5.190e-2058.43Uncharacterized protein n=1 Tax=Arthrobotrys flagr... [more]
A0A8C5UAN8_9PASS6.220e-2045.99Zinc finger NFX1-type containing 1 n=1 Tax=Malurus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10982contigEcto-sp13_S_contig10982:18..5523 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score911.4
Seed ortholog evalue2.6e-262
Seed eggNOG ortholog2880.D8LCR9
Model size2034
Hectar predicted targeting categoryother localisation
Exons11
EggNOG free text desc.Nfx1-type zinc finger-containing protein
EggNOG OGsCOG1112@1,KOG1807@2759
Cds size2034
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10982.862.1prot_Ecto-sp13_S_contig10982.862.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10982 18..5523 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462567.1223657-CDS-Ecto-sp13_S_contig10982:17..1431681462567.1223657-CDS-Ecto-sp13_S_contig10982:17..143Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 18..143 -
1681462567.137324-CDS-Ecto-sp13_S_contig10982:487..5971681462567.137324-CDS-Ecto-sp13_S_contig10982:487..597Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 488..597 -
1681462567.152943-CDS-Ecto-sp13_S_contig10982:792..12691681462567.152943-CDS-Ecto-sp13_S_contig10982:792..1269Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 793..1269 -
1681462567.163638-CDS-Ecto-sp13_S_contig10982:1451..21091681462567.163638-CDS-Ecto-sp13_S_contig10982:1451..2109Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 1452..2109 -
1681462567.1779418-CDS-Ecto-sp13_S_contig10982:2169..22261681462567.1779418-CDS-Ecto-sp13_S_contig10982:2169..2226Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 2170..2226 -
1681462567.1870131-CDS-Ecto-sp13_S_contig10982:2385..25501681462567.1870131-CDS-Ecto-sp13_S_contig10982:2385..2550Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 2386..2550 -
1681462567.1946614-CDS-Ecto-sp13_S_contig10982:4001..41511681462567.1946614-CDS-Ecto-sp13_S_contig10982:4001..4151Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 4002..4151 -
1681462567.2024386-CDS-Ecto-sp13_S_contig10982:4402..44771681462567.2024386-CDS-Ecto-sp13_S_contig10982:4402..4477Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 4403..4477 -
1681462567.2106934-CDS-Ecto-sp13_S_contig10982:4841..49431681462567.2106934-CDS-Ecto-sp13_S_contig10982:4841..4943Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 4842..4943 -
1681462567.2192214-CDS-Ecto-sp13_S_contig10982:5051..50641681462567.2192214-CDS-Ecto-sp13_S_contig10982:5051..5064Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 5052..5064 -
1681462567.2279882-CDS-Ecto-sp13_S_contig10982:5422..55231681462567.2279882-CDS-Ecto-sp13_S_contig10982:5422..5523Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10982 5423..5523 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10982.862.1

>prot_Ecto-sp13_S_contig10982.862.1 ID=prot_Ecto-sp13_S_contig10982.862.1|Name=mRNA_Ecto-sp13_S_contig10982.862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=678bp
AREVLPFADTLLPPSAASAAGATARDATEPKPPRNCLGGNAEAPLDALRS
VSMLDRERFPMTELLDHTTLDQAQLEALRAALSKEVALIQGPPGTGKTFV
GAKVVRLLLTNRRMLSHWRGPIMCVCLTNHALDQFLCDLLDAGVDGIWAD
GVTAITANFRDANWSTTEVLHRLLVSHAPPVFEEAIINGNKHPVVDEDGW
QTVGKMPSGIKDWLAGKNPADEVSGAMTNHDDNDRTRRKARLPDAQDDKV
AGTNERKRRSQQRALDRRAAATVPYPDARRGAGAASSISVPSEPLPSADG
TRAGESKQTTEDLDDDDRVAAGKETAYANSGATKQGEDHIATGMARSVAA
GNPWLALANLNHDSSGESSDYSSMPGGEPAFDLFDVEAEPKNTTSGGGVN
DDGTSWWSFANSGLAPMADGEGWEMFESEETDDDEEGHVDGGHLEAKGNS
PSCETHPDGVHPPAALPPTPATSGAQQQRQNQKRQHLEQRRGSGAGRGRS
GRGRGHGTTVHVRVAAGPDDVGGPGFGAGRGKRDDAEMKTGERSVGNSEG
GGSGQDEDDEGHWGSTSDGLEQGSGDEGEEETDSVASSMSEDPQSESSDD
EDSKDGSSEEGDPGDTRPTPPAGAVDGLNDYDIIVSAVVNGRSVWALSPE
ERRTLCRHWQQTEAEASRERLARMIEE*
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mRNA from alignment at Ecto-sp13_S_contig10982:18..5523-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10982.862.1 ID=mRNA_Ecto-sp13_S_contig10982.862.1|Name=mRNA_Ecto-sp13_S_contig10982.862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5506bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10982:18..5523- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCGAGAGGTGCTTCCCTTCGCGGACACGCTGCTACCGCCCTCGGCCGC
ATCCGCGGCCGGCGCCACGGCTCGAGATGCTACCGAGCCAAAACCTCCGA
GGTACCTTCTGCGAGGCAAGTGTGCGTGGCGCTCATGCTGATTTGACGTG
ACGTTCAATACCGCGCCGAGACGGTTTGCTCTGAATCAATCAGTGGACCC
ATGTTACCTTGTCTGGTCGGTGTGTGGGGACAAGCGTACATCCATCCTTG
CATATTACATCAATCTTTCGCACAATAGGATTCTCCTCTGCACGGGCGTA
CTACCGTTCCCCTTCTCAGGGCGCAGACATGGCGAAACATTCCTCATCAC
TCGAGTTTAGATTGACACAGTCGCCACGATGGCACCTGCCCACAACCAGT
CTATCACCCCATTCTCCGTACCACAGATGGTGCATTGAGCATGTATTGCC
AACAAGGAGAAACTGCCTTGGGGTTGGAAGATCTCTCACCAAGCGAAGCC
CTAACCCGACCCCCCACCCGCACCCCGTCACGTGCACAGTTGATGCGTAC
GACTTGACGGATCTGATTAACGTGCGTGAGGGAAACGCCGAGGCCCCTCT
GGACGCCCTTAGGTCCGTCAGCATGCTGGATCGGGAGCGCTTCCCCATGA
CCGAGTTGTTGGATCACACGACGCTTGACCAGGTATGGGACGAATCTCAT
CTTCGGCGGCTTGTTTATCGCCTCTTGTAGGCATTGAACAAGCGGCTTCG
ACCCGGTTGCTTCAAACGCCTTGACATTGGAACGTTGTCGGGCGCAACGG
AGTCCGAAATTTAGCGAACCACAATAGCCGGAACACGGAATGGTGACTTC
TATTTCCCTCTCTGACCCACCGGATTTCGAGCAATGTGACGGGGATGGCG
ATTTAAGAAGCCGGTAGCGATGGACACGCCTCTTTCGTCCTGGAAAATTC
AACGCAAGCGATCGTTGTTGTGGCTGCATCAACGGAGGAGGTGGTCTTAC
CGGTAACATGACGTATTTTTTGTGTATGCCTTGTCATTTCGCACAGGCTC
AACTTGAGGCTCTTCGCGCGGCACTCTCCAAGGAGGTGGCCCTCATTCAA
GGACCCCCGGGGACGGGCAAGGTACGACCTTGCGCTCGTCGCCATCCCTC
GCCGTCATGCTTGTCGAGGTCCACCCTCAGCTCTTGCACCGGAGAATGGC
GTTCTGCGAAGAGATCTTGAGGGCTGACTTGTTTGTGCGCGTAGAACACA
AAGCGTATGCCTGCCCTCCCGTCTTTCTCTCAACCTCCTCCTTTTCACGC
TCGTCGCTTGCTGTTCTTACTGCTTCGTTTTTCTCCATCTCTCCCGACCT
TCCCCCTTGCTCCTGCACGAAGACCTTCGTCGGGGCGAAGGTTGTCCGGC
TCCTGCTCACCAACAGACGCATGCTGAGTCATTGGAGGGGACCGATCATG
TGCGTCTGCCTCACGAACCACGCCCTGGACCAGTTCCTTTGCGACCTCTT
AGACGCCGGAGTCGACGGCATCGTCAGGTGATGATGCATCCGACCCGGCC
GAGAGAATGATAAAAGTGGTAGGGAAGCGGCTACGTGTGTGTCAAGTGGG
GGACGCTTGTTGATGATCTTCCAGACCACGAGAGCGCGGCGGGTGGTTTT
CGTCGAGTAACCCGTTTTCGTGCATCCCGTGCACAATCGGCCTTCTTCGT
ATTGTCCCCTCGCCTTAATAAGTATGAGCAATAATTCTCGTGTCTTGATT
TTTTGAATATTGCTATTTTTCATTGTGACTGCTCTTGTGAGTGCTGTTGG
GGGCACCGTGGATGGGGTCTGTGGGGGGGGGGGGGGGGCTATTGATGCTG
CGCGAGTCGCTTGTCGTTACCTTCGGTAGGGATTTCCATGCTTGCGTCGG
ATCCAGGCAAGCGTTGCTATTCCCCCGCGTCTCTTCCACTCCGACATCTG
ACTTTCGTGGGTGTGTTCCACTCCTGTGCTAGACCAAACATCTGCGCGGG
TCATCTATCTGTTAGTGAAATTGATTTCGTTTGTCCGCTTGTCTTACGAA
ATCCCCCCGTCCCGCCTTCGTACCGCTCCTCTTGAATTTCCATGGTCTTT
CTGCAAGGGTTGGCGGTAGCTGCAAGACCGACAGGCTGAAGCGATTCATG
CTGAGAGAGCTTTCGCAAGGCCGGAGAGGTATGAAGCCAAGGCTTGCTTC
CCCAAGGGGTTTCATGCTTTGCCGTGCGAGAGTCGTTTGAAATCGCATGC
TCTTCCCATTTTTTCGAAAGTGTTTCTAAGTGATGATAACTGGCGAGTCA
TTTTTTCTGCTGTTCATTTTCGATCTCCGACGCTTCGGAAGCTGCCGCTC
CAAGACGATTGTGCCCCAACCTCCTTCAAACGCTTTTAGACTTTCAAAGG
TGTTGAAGTATGCAACATTGGGGAAAAAAGAGTACCCCTTTCAAAACATC
TCATGCTGCTGGTGCATTCATGTGGATGGCGCTTCCATATCGAGGCGGTG
ACATCCGTGGCAAATGGCTACGTGGTTGCGGGAACTATTGGTTGACATAC
CGTATCCAGCTTCGATCGAACATGTATCCGGGGAAAAACATCTACTACAT
ACACGTGGCGCTCTCAGCTGTTTTCGTCCTTGGGTGCGGCGGCCGCGACC
CCGACCTACTCCTTTTCTTCTTGGTAAACGCTCGAAGACTCTTGCGGCAA
GGAGATGTACCGACTGCGGAACTTGATGAAGGAGCTGAGCGACGACATGC
GCGACGAGTGGGAGGTGAGTGCCAAGCGACGTACCGCGGTACTGATTTAT
TGGTGTTGCTCTCGTGACGGGTCCTTTCGTGAAGGATAACAACCCGCGAG
CCGATTGGGATATGCCGCGGTTTCCAGCGCTGTAATCGTTTCGGTGTTAT
TGCAATACCTTGCTCTTCACGTCTCGCTCTTCTGCGGCTTTGGGTCCCCC
TACCTTACCTTTCGGTTTTGCAGTGGGCGGACGGGGTCACGGCGATCACG
GCCAACTTTCGCGATGCCAACTGGAGCACCACGGAAGTGTTGCACAGGCT
TCTTGTAAGCCACGCGCCTCCCGTCTTCGAAGAGGCCATCATCAACGGTA
ACAAGCACCCTGTGGTTGACGAGGATGGCTGGCAAACGGTGAGGTGCCTG
CCTCGACTCGTTCCCGCTGATTTAAATACGACAGCAGGTTCATGATGGGT
GCGACAAACTGAGAAAAACGCTGCGTTGGTGAGCGCGAAGTACTCCCCGC
CAAGCGCATGACTAAAACCTCACCCTGAAACCGCCAACAACCTCCAGGTA
GGAAAGATGCCCAGCGGCATCAAAGACTGGCTGGCGGGAAAGAACCCCGC
TGACGTCAGGCGGCGGCGCCAGGGTTGCAGGCGAAAGAACAAGCCTCCCG
GCGTGAGGACAAAGGAGGTGAGCGGCGCCATGACCAACCACGACGACAAT
GATCGAACGCGGAGGAAGGCGAGGCTGCCCGACGCGCAGGACGACAAGGT
CGCCGGGACCAACGAAAGGAAGAGGCGCAGCCAGCAACGAGCGTTGGACC
GCCGCGCCGCCGCCACGGTTCCTTATCCTGATGCTCGACGCGGTGCTGGT
GCTGCTTCGTCAATCAGCGTGCCGTCGGAACCGCTCCCAAGCGCAGATGG
TACCCGTGCCGGAGAAAGCAAACAGACCACGGAGGACCTCGACGACGACG
ACAGAGTCGCTGCAGGGAAGGAAACCGCCTACGCCAACTCCGGGGCTACC
AAACAAGGCGAAGACCACATTGCCACCGGGATGGCGCGCTCGGTGGCCGC
GGGGAATCCCTGGCTCGCCCTGGCCAATCTCAACCACGACAGCAGCGGTG
AAAGTTCCGACTATTCCTCGATGCCAGGTGGCGAACCGGCGTTCGATTTG
TTTGACGTGGAAGCGGAGCCGAAGAACACTACCTCGGGCGGCGGCGTGAA
CGACGATGGCACATCTTGGTGGTCGTTCGCCAACAGTGGTTTGGCTCCCA
TGGCGGACGGAGAGGGGTGGGAGATGTTCGAAAGCGAAGAGACTGATGAC
GACGAGGAAGGCCACGTTGACGGTAAGAGATGAGTTAGTTATGGAGGCAT
CGCCGTCACGATGGCTTTAAATACTCGTCAACCGACAGATCTCTTGCAAC
GGCCATACCGGACAGTTCTTCCGCTCACTCACCCCAAATCATCGTAGACC
TTTGCCCGCCTCCCCGCCCGCCCTGGCCCGACACCCAAACCTCGCTCGCA
TCAGGTGGCCATCTCGAAGCGAAGGGTAATTCTCCCAGCTGTGAGACCCA
TCCTGACGGGGTCCATCCTCCCGCGGCCCTTCCACCCACACCCGCTACAT
CCGGAGCGCAGCAGCAGCGTCAGAACCAGAAGAGGCAGCACCTGGAGCAA
CGCCGAGGGTCCGGGGCCGGGCGTGGTCGGTCTGGGCGCGGGCGCGGGCA
TGGCACCACCGTGCACGTCCGTGTCGCCGCGGGGCCGGACGATGTCGGTG
GTCCCGGGTTCGGCGCCGGCCGCGGCAAGCGTGACGACGCAGAGATGAAG
ACTGGAGAAAGGTCGGTCGGCAACAGCGAGGGGGGCGGCAGCGGTCAGGA
CGAAGACGACGAGGGACATTGGGGCTCTACAAGCGATGGACTGGAGCAGG
GAAGCGGTGACGAGGGAGAAGAAGAGACAGATTCTGTCGCGTCATCAATG
AGCGAAGACCCCCAAAGCGAAAGCAGTGACGGTAGGCCGGTATTGGGAGA
GGTGGTTGGATAACCTGGAAACGGAAAAGCAGAAGGGAATCTGAGAAGAA
TACGCCGCAGATCGGCGCTTGGGCAGGGGTTAGAGTACCGTCTTCCGAAA
CAAGGAACAGAAATTTCGTTTCCCGGAAAGCTCCTTGACCATTCTCCACA
CGCCCACTCTCCTCTGTTGCGCCCAGACGAGGATTCCAAGGACGGTTCCA
GCGAGGAAGGAGATCCAGGCGATACCAGGCCTACCCCTCCAGCCGGTGCC
GTGGATGGTCTGAATGACTACGATATCATCGTATCGGTAAGATTGGTTTT
GGTGATGCTGAGTGGAACGCTCCCGCGTGGCCTTCGCAAGTCCAAGGGGG
GCTGATGGGAGAGGCACATTACTTGGATGATGCATATCTCGTTGCCTGGA
GAAAGAGTTGCATTCATGCCGCATCAATTACGAGCGAAAGAACACCAGGA
CATCAGGACATCAGGACATCACCAACATCTACAACATGGGGAGCCCAGTG
CCAACAACGTCCGTGGGCAAGAAATCGGTGCTTTGGCGAAGCCACGTACA
TGCGCAAACGTCTTCGACGCCGCCTATCCGCATGTGTGGGGTCAGTCACT
CCTCGCACGTTGATGTATACGTTGTTTCAGGCGGTCGTAAACGGACGGAG
CGTGTGGGCGCTTTCTCCCGAGGAGCGACGGACGCTCTGCCGTCATTGGC
AACAGACCGAGGCGGAGGCTTCGAGGGAGCGCCTTGCTCGAATGATCGAA
GAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10982:18..5523-

>mRNA_Ecto-sp13_S_contig10982.862.1 ID=mRNA_Ecto-sp13_S_contig10982.862.1|Name=mRNA_Ecto-sp13_S_contig10982.862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2034bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10982:18..5523- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCGAGAGGTGCTTCCCTTCGCGGACACGCTGCTACCGCCCTCGGCCGC
ATCCGCGGCCGGCGCCACGGCTCGAGATGCTACCGAGCCAAAACCTCCGA
GAAACTGCCTTGGGGGAAACGCCGAGGCCCCTCTGGACGCCCTTAGGTCC
GTCAGCATGCTGGATCGGGAGCGCTTCCCCATGACCGAGTTGTTGGATCA
CACGACGCTTGACCAGGCTCAACTTGAGGCTCTTCGCGCGGCACTCTCCA
AGGAGGTGGCCCTCATTCAAGGACCCCCGGGGACGGGCAAGACCTTCGTC
GGGGCGAAGGTTGTCCGGCTCCTGCTCACCAACAGACGCATGCTGAGTCA
TTGGAGGGGACCGATCATGTGCGTCTGCCTCACGAACCACGCCCTGGACC
AGTTCCTTTGCGACCTCTTAGACGCCGGAGTCGACGGCATCTGGGCGGAC
GGGGTCACGGCGATCACGGCCAACTTTCGCGATGCCAACTGGAGCACCAC
GGAAGTGTTGCACAGGCTTCTTGTAAGCCACGCGCCTCCCGTCTTCGAAG
AGGCCATCATCAACGGTAACAAGCACCCTGTGGTTGACGAGGATGGCTGG
CAAACGGTAGGAAAGATGCCCAGCGGCATCAAAGACTGGCTGGCGGGAAA
GAACCCCGCTGACGAGGTGAGCGGCGCCATGACCAACCACGACGACAATG
ATCGAACGCGGAGGAAGGCGAGGCTGCCCGACGCGCAGGACGACAAGGTC
GCCGGGACCAACGAAAGGAAGAGGCGCAGCCAGCAACGAGCGTTGGACCG
CCGCGCCGCCGCCACGGTTCCTTATCCTGATGCTCGACGCGGTGCTGGTG
CTGCTTCGTCAATCAGCGTGCCGTCGGAACCGCTCCCAAGCGCAGATGGT
ACCCGTGCCGGAGAAAGCAAACAGACCACGGAGGACCTCGACGACGACGA
CAGAGTCGCTGCAGGGAAGGAAACCGCCTACGCCAACTCCGGGGCTACCA
AACAAGGCGAAGACCACATTGCCACCGGGATGGCGCGCTCGGTGGCCGCG
GGGAATCCCTGGCTCGCCCTGGCCAATCTCAACCACGACAGCAGCGGTGA
AAGTTCCGACTATTCCTCGATGCCAGGTGGCGAACCGGCGTTCGATTTGT
TTGACGTGGAAGCGGAGCCGAAGAACACTACCTCGGGCGGCGGCGTGAAC
GACGATGGCACATCTTGGTGGTCGTTCGCCAACAGTGGTTTGGCTCCCAT
GGCGGACGGAGAGGGGTGGGAGATGTTCGAAAGCGAAGAGACTGATGACG
ACGAGGAAGGCCACGTTGACGGTGGCCATCTCGAAGCGAAGGGTAATTCT
CCCAGCTGTGAGACCCATCCTGACGGGGTCCATCCTCCCGCGGCCCTTCC
ACCCACACCCGCTACATCCGGAGCGCAGCAGCAGCGTCAGAACCAGAAGA
GGCAGCACCTGGAGCAACGCCGAGGGTCCGGGGCCGGGCGTGGTCGGTCT
GGGCGCGGGCGCGGGCATGGCACCACCGTGCACGTCCGTGTCGCCGCGGG
GCCGGACGATGTCGGTGGTCCCGGGTTCGGCGCCGGCCGCGGCAAGCGTG
ACGACGCAGAGATGAAGACTGGAGAAAGGTCGGTCGGCAACAGCGAGGGG
GGCGGCAGCGGTCAGGACGAAGACGACGAGGGACATTGGGGCTCTACAAG
CGATGGACTGGAGCAGGGAAGCGGTGACGAGGGAGAAGAAGAGACAGATT
CTGTCGCGTCATCAATGAGCGAAGACCCCCAAAGCGAAAGCAGTGACGAC
GAGGATTCCAAGGACGGTTCCAGCGAGGAAGGAGATCCAGGCGATACCAG
GCCTACCCCTCCAGCCGGTGCCGTGGATGGTCTGAATGACTACGATATCA
TCGTATCGGCGGTCGTAAACGGACGGAGCGTGTGGGCGCTTTCTCCCGAG
GAGCGACGGACGCTCTGCCGTCATTGGCAACAGACCGAGGCGGAGGCTTC
GAGGGAGCGCCTTGCTCGAATGATCGAAGAGTGA
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