mRNA_Ecto-sp13_S_contig10981.861.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: D8LFK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK0_ECTSI) HSP 1 Score: 840 bits (2170), Expect = 2.240e-289 Identity = 485/550 (88.18%), Postives = 498/550 (90.55%), Query Frame = 1
Query: 1 TRCIGKNPHTPVVLLSLKSPGYLLHWDLPSMKR*APLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGVPGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMAAAETEHQYATFGLIKAVVARRVMLPEVLYDLMTKLAELAVTSHRPTLRATSCQTFLTFLLHYPLGEKRLQFHLNQIISGLSYTHAEGSLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECHAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPLGAGWGEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSVGAAAEXXXXXXG---ADGNWEGVYHAVLSIGKAFDALPGACNAALSGGXXXXXXDEGDGLFDRLLEALLYPHAWVRLAAARVWGSFFSKRDPGTLSVSTGGXXXXXXXXGDRQVKGSRTPTRVQGGSTPGKLKXXGXXXXXXXXXXXXXXXXXGGQERR--PVPSVPEPVLSAQQVAGRQYRVFPCGTFQEI 1635
TRCIGK+PHTPVVLLSLKS GYLLHWDLPSMKR APLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQ+FGVPGE+AGRRKGRGGGLFGLSPKQLRALLVVLQMA AETEHQ ATF L+KAVVARRVMLPEV YD+MTKLAELAVTSHRPTLRATS QTFLTFLLHYPLGEKRLQFHLNQI+SG+SY HAEG LAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQA EC AAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAP GAG GEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAG XXXXXX ADG+WEGVYHAVLSIGKAFDALPGACNAALS XXXXXX GDGLFDRLLE LLYPHAWVRL AARVWGSFFSKRDPGTL+V+TGG G QV+GS+TP RVQGGSTPGKLKXX XXXXXXXXXXXXXXXX GGQE+ PVP VPEPVLSAQQVAGRQYRV G FQEI
Sbjct: 340 TRCIGKHPHTPVVLLSLKSLGYLLHWDLPSMKRCAPLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQLFGVPGEEAGRRKGRGGGLFGLSPKQLRALLVVLQMAVAETEHQNATFALMKAVVARRVMLPEV-YDIMTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIVSGVSYEHAEGRLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAGECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPSGAGGGEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGXXXXXXXXXXXXXXXXXXADGDWEGVYHAVLSIGKAFDALPGACNAALSX-XXXXXXXXGDGLFDRLLEVLLYPHAWVRLVAARVWGSFFSKRDPGTLAVNTGG--------GGGQVEGSQTPKRVQGGSTPGKLKXXXXXXXXXXXXXXXXXXXDGGQEKEACPVPPVPEPVLSAQQVAGRQYRVLSGGAFQEI 879
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: D8LFJ6_ECTSI (DRIM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ6_ECTSI) HSP 1 Score: 857 bits (2215), Expect = 8.140e-276 Identity = 487/550 (88.55%), Postives = 496/550 (90.18%), Query Frame = 1
Query: 1 TRCIGKNPHTPVVLLSLKSPGYLLHWDLPSMKR*APLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGVPGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMAAAETEHQYATFGLIKAVVARRVMLPEVLYDLMTKLAELAVTSHRPTLRATSCQTFLTFLLHYPLGEKRLQFHLNQIISGLSYTHAEGSLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECHAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPLGAGWGEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSVGAAAEXXXXXXGADGNWEGVYHAVLSIGKAFDALPGACNAALSGGXXXXXXDEGDGLFDRLLEALLYPHAWVRLAAARVWGSFFSKRDPGTLSVSTGGXXXXXXXXGDRQVKGSRTPTRVQGGSTPGKLKXXGXXXXXXXXXXXXXXXXXGGQERR-----PVPSVPEPVLSAQQVAGRQYRVFPCGTFQEI 1635
TRCIGKNPHTPVVLLSLKS GYLLHWDLPSMKR APLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGVPGE+AGRRKGRGGGLFGL+PK+LRALLVVLQMA AETEHQ ATF LIKAVVARRVMLPEV YDLMTKLAELAVTSHRPTLRATS QTFLTFLLHYPLGEKRLQFHLNQI+SG+SY HAEG LAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQA EC AAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAP GAG GEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSV XXXXXX ADG WEGVYHAVLSIGKAFDALPGACN ALSG DE DGLFDRLLE LLYPHAWVRLAAARVWGSFFSKRDPGTL+V+TGG G QV+GS+TP RVQGGSTPGKLKXX XXXXXXXXXXXXXXXX GGQE PVP VPEPVLSAQQVAGRQYRVF G FQEI
Sbjct: 2729 TRCIGKNPHTPVVLLSLKSLGYLLHWDLPSMKRCAPLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGVPGEEAGRRKGRGGGLFGLAPKRLRALLVVLQMAVAETEHQIATFTLIKAVVARRVMLPEV-YDLMTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQIVSGVSYEHAEGRLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAGECRAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPSGAGGGEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSVXXXXXXXXXXXXADGEWEGVYHAVLSIGKAFDALPGACNTALSG-VGGGGGDEDDGLFDRLLEVLLYPHAWVRLAAARVWGSFFSKRDPGTLAVNTGG--------GGGQVEGSQTPKRVQGGSTPGKLKXXXXXXXXXXXXXXXXXXXDGGQEFASKETCPVPPVPEPVLSAQQVAGRQYRVFSGGAFQEI 3268
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: A0A6H5JC18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC18_9PHAE) HSP 1 Score: 442 bits (1137), Expect = 1.920e-142 Identity = 265/326 (81.29%), Postives = 270/326 (82.82%), Query Frame = 1
Query: 559 QIISGLSYTHAEGSLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECHAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPLGAGWGEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSVGAAAEXXXXXXGADGNWEGVYHAVLSIGKAFDALPGACNAALSGGXXXXXXDEGDGLFDRLLEALLYPHAWVRLAAARVWGSFFSKRDPGTLSVSTGGXXXXXXXXGDRQVKGSRTPTRVQGGSTPGKLKXXGXXXXXXXXXXXXXXXXXGGQE 1536
QIISG+SY HAEG LAA+NLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAEC AAASTA+RTLLDRVSPAVFQELLEFTGQWF GAP GAG GEEDPGL RTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALS MLPRRAA VIAAARSAGWGDAGG XXXXXX WEGVYHAVLSIGKAFDALPGACNAALSGG XXXX GDGLFDRLLEALLYPHAWVRLAAARVWGS FSKRDPGTL+VST G XXXXXX D QVKGS+TPT VQGGS PGKLK G GGQE
Sbjct: 30 QIISGVSYEHAEGRLAAINLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECRAAASTAIRTLLDRVSPAVFQELLEFTGQWF----TGAPSGAGRGEEDPGLLRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSSMLPRRAAAVIAAARSAGWGDAGGXX--XXXXXXXXXXXXXXWEGVYHAVLSIGKAFDALPGACNAALSGGGXXXX---GDGLFDRLLEALLYPHAWVRLAAARVWGSLFSKRDPGTLAVSTVGGGXXXXXX-DGQVKGSQTPTLVQGGSAPGKLKGKGRGQRRCDVPGEGAGVGDGGQE 345
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: A0A6H5K313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K313_9PHAE) HSP 1 Score: 377 bits (968), Expect = 4.440e-115 Identity = 245/275 (89.09%), Postives = 256/275 (93.09%), Query Frame = 3
Query: 1671 NHAQVDPKLTEQCVKNLVFVGRAMHPNPELCFAEDAEDAVEQEENASETESPAMDEASDSEGVDDXXXXXXXXXXXXXXXXXXXXX-EATAPGAADPLRWVFNRMSHMVVHKGEARRQAVFSWFLAMVAVHEPAVAVAHLKLMLLPLRRAVLDAEAGGVEHKAGGSHAGXXXXXXXXXXSKKDQTAAELATEVMELLEEKVGSCRFLEALTGVNMEISRKRVERKRQRAVEKATNPVAGAERRRERTEAGKIQKRRKVEESAKLRGGTKHMRMGG 2492
N +QVDPKLTEQCVKNLVF+GRAMH NPELCFAEDA V+QEENASETESPAMDE+SDSEG D XXXXXXXXXXXXXXXXXX X +ATAPGAADPLRWVFNRMSHMVVHKGEARR+AVFSWFLAMVAVHEPAV VAHLKLMLLPLRRAVLDAEAGGVEHKAGGSHA XXXXXXXXXX +K+QTAAELATEVMELLEEKVGS RFLEALTGVNMEISR+RV RKRQRAVEKAT+PVA E+RRERTEAGKIQKRRKVEE AKLRGGTK MRMGG
Sbjct: 439 NRSQVDPKLTEQCVKNLVFLGRAMHLNPELCFAEDA---VKQEENASETESPAMDESSDSEGFDXXXXXXXXXXXXXXXXXXXAGXGKATAPGAADPLRWVFNRMSHMVVHKGEARRRAVFSWFLAMVAVHEPAVPVAHLKLMLLPLRRAVLDAEAGGVEHKAGGSHAXXXXXXXXXXXXEKEQTAAELATEVMELLEEKVGSGRFLEALTGVNMEISRERVARKRQRAVEKATDPVAAGEQRRERTEAGKIQKRRKVEELAKLRGGTKRMRMGG 710
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: A0A6H5JFX0_9PHAE (DRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX0_9PHAE) HSP 1 Score: 346 bits (888), Expect = 5.530e-98 Identity = 178/186 (95.70%), Postives = 180/186 (96.77%), Query Frame = 1
Query: 7 CIGKNPHTPVVLLSLKSPGYLLHWDLPSMKR*APLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGVPGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMAAAETEHQYATFGLIKAVVARRVMLPEVLYDLMTKLAELAVTSHRPTLRATSCQTFLTFLLHYPLGEKRLQFHLNQI 564
CIGKNPHTPVVLLSLKS GYLLHWDLPSMKR APLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFG+PGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMA AETEHQ ATFGLIKAVVARRVMLPEV YDLMTKLAELAVTSHRPTLRATS QTFLTFLLHYPLGEKRLQFHLNQ+
Sbjct: 2880 CIGKNPHTPVVLLSLKSLGYLLHWDLPSMKRCAPLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGIPGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMAVAETEHQNATFGLIKAVVARRVMLPEV-YDLMTKLAELAVTSHRPTLRATSGQTFLTFLLHYPLGEKRLQFHLNQV 3064
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: D7G498_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G498_ECTSI) HSP 1 Score: 271 bits (692), Expect = 7.850e-77 Identity = 171/280 (61.07%), Postives = 182/280 (65.00%), Query Frame = 1
Query: 136 LVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGVPGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMAAAETEHQYATFGLIKAVVARRVMLPEVLYDLMTKLAELAVTSHRPTLRATSCQTFLTFLLHYPLGEKRLQFHLNQIISGLSYTHAEGSLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECHAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPLGAGWGEEDPGLRRTAAQACGI-FVQARPELVRKAAGTGGGGRL 972
L RGGVGGIRGEMGQ CFKALSMLFKSQVQ LRALLVVLQMA AET HQ ATF LIKAVVARRVMLPEV YDLMTKLAELAVTSHRPTLRATS QTFLTFLLHY G F ++ S+ HAEG LAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAEC AAASTAVRTLL RVS + G G + G G G++ PG + G + + R R+ G G L
Sbjct: 364 LTRGGVGGIRGEMGQTCFKALSMLFKSQVQ--------------------------LRALLVVLQMAVAETVHQNATFTLIKAVVARRVMLPEV-YDLMTKLAELAVTSHRPTLRATSGQTFLTFLLHYSRGRNGCSFASTRV----SHEHAEGRLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECRAAASTAVRTLLGRVSLLCSRSSWNSRGSGSGRRMRGPRRGREGGKKTPGSGERPLRPAGFSYRRGRSSCGRRRGPAAGAGCL 612
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: A0A835YZH5_9STRA (DRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH5_9STRA) HSP 1 Score: 266 bits (679), Expect = 7.950e-71 Identity = 200/512 (39.06%), Postives = 262/512 (51.17%), Query Frame = 1
Query: 7 CIGKNPHTPVVLLSLKSPGYLLHWDLPSMKR*APLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGVPGEDA------------GRRKGRGGGLFGLSPKQLRALLVVLQMAAAETEHQYATFGLIK----------------------AVVARRVMLPEVLYDLMTKLAELAVTSHRPTLRATSCQTFLTFLLHYPLGEKRLQFHLNQIISGLSYTHAEGSLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECHAAASTAVRTLLDRVSPAVFQELLEFTGQWFG---EKDAGAPLGAGW---GEEDP---GLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSVGAAAEXXXXXXGADGNWEGVYHAVLSIGKAFDALPGACNAALSGGXXXXXXDEGDGLFDRLLEALLYPHAWVRLAAARVWGSFFSKRDPGTLSVSTGGXXXXXXXXGDRQVKG 1413
C+ + H + LL+LK+ G LL W LP + AP +GR L L R GV GIR E QACFK L+ L SQV +F + A G +G FGL KQ+ ALL +L+ + E +HQ F L++ A+VA +V+ P V YD+M ++ +LAV S R +LRAT Q FL FL+ YP+G KRL+ HL ++ G Y H EG +AAL++ L+RRLP P LD+ + +F+LAL VR V D A AAAS A+ LL RVS V+ +L + +WFG E DAG ED L +TAA + ARP+L R+ GG LP +L AL+ LP +V A A D + AAA WE YHA L + + ALP A +AA + D L+YPHAWVRLA AR G++ S+RDP TL+ GGXXXXXXXXGD +G
Sbjct: 2656 CVVHSAHAHITLLALKAMGQLLKWKLPVQEEEAPEIGRVALKLLARSGVAGIRSETSQACFKMLAALCDSQVDLFAAKRDAAAAXXXXXXXXXXGAARGPTQRFFGLQQKQMDALLTLLKASLLEQDHQAPAFSLLRGXXXXXXXXXXXXXXXXXXXLRAIVAHQVLQPAV-YDIMVEVGKLAVISPRASLRATCSQMFLDFLVTYPVGAKRLEQHLRAVLEGTGYQHEEGRVAALDMARHLIRRLPVPLLDEHAQLFFLALAVRAVGDDARAARAAASAALTQLLTRVSADVYAQLWGYAMRWFGDAREGDAGDXXXXXXXXHSAEDHRRRALAKTAAACTALAAAARPDLARR------GGALPPLLRALTACLPASVKDVEAVA------DTSAAAAAAAVTHP--------WECAYHAALCLERVITALPAAFDAAAA---------PAAAALDAACACLVYPHAWVRLACARALGAYLSRRDPATLAP-LGGXXXXXXXXGDFLARG 3136
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: A0A1V9Z4K2_9STRA (U3 small nucleolar RNA-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4K2_9STRA) HSP 1 Score: 200 bits (508), Expect = 3.720e-49 Identity = 143/455 (31.43%), Postives = 221/455 (48.57%), Query Frame = 1
Query: 4 RCIGKNPHTPVVLLSLKSPGYLLHWDLPSM-KR*APLVGRHVLARLVRGGVGGIRGEMGQACFKALSMLFKSQVQVFGVPGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMAAAETEHQYATFGLIKAVVARRVMLPEVLYDLMTKLAELAVTSHRPTLRATSCQTFLTFLLHYPLGEKRLQFHLNQIISGLSYTHAEGSLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECHAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPLGAGWGEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSVGAAAEXXXXXXGADGNWEGVYHAVLSIGKAFDALPGACNAALSGGXXXXXXDEGDGLFDRLLEALLYPHAWVRLAAARVWGSFFSKRDPGTLSVSTG 1365
RC+ + H V+ +LK LL+ +PS+ +PLV R + +L++ + EM Q C++ALS+L + + + + +S QLR LL L+ E +HQ +TF L+KA++ARR+++PEV YDLM ++ E+ V S +R+ +LTFLL YPLG+KRL +H+ +++ L++ + G LA L+ L+++LP LD + F L LV+RLV+D+A C A A+ + L RVS A F W W D L+ AA G+ V ARPEL +K+ T GR+ +L+A + + + + I + WE VY +L + K ALP A A L + + D ++E + YPHAWVRLAA R G++ + R TL + G
Sbjct: 2105 RCLAEIKHNETVVHALKCLAVLLNHPVPSLVAELSPLVDR--IFKLIQRAGAATKNEMTQTCYRALSILLRERNE-------------------YAMSDAQLRVLLSFLRQDLDEMDHQNSTFALLKALLARRLVIPEV-YDLMLRVGEMMVQSQVANVRSNCAAMYLTFLLDYPLGDKRLNYHVRFLVNNLAFVYESGRLATLDCLDALVKKLPSDLLDARAQFFLLPLVLRLVNDEAQPCRALAADVISHLFQRVSAATFAVCTAAMEPW-------------WASADAKLKCAAAHVSGLVVAARPELAKKSFLTPLLGRVGALLAAATSDIGAQDEDAI---------------------------EELTWEPVYLTLLCLEKVRHALPAALEAWLL---------DHAAVLDTVVELMGYPHAWVRLAATRALGAYTAARTASTLCYTDG 2488
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: W7UBP4_9STRA (U3 small nucleolar rna-associated n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBP4_9STRA) HSP 1 Score: 193 bits (490), Expect = 5.570e-47 Identity = 153/461 (33.19%), Postives = 228/461 (49.46%), Query Frame = 1
Query: 4 RCIGKNPHTPVVLLSLKSPGYLLHW--DLPSMKR*APLVGRHVLARL-VRGGVGGIRGEMGQACFKALSMLFKSQVQVF--GVPGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMAAAETEHQYATFGLIKAVVARRVMLPEVLYDLMTKLAELAVTSHRPTLRATSCQTFLTFLLHYPLGEKRLQFHLNQIISGLSYTHAEGSLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECHAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPLGAGWGEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSVGAAAEXXXXXXGADGNWEGVYHAVLSIGKAFDALPGACNAALSGGXXXXXXDEGDGLFDRLLEALLYPHAWVRLAAARVWGSFFSKRDPG--TLSVSTG 1365
RC+ + + +VLLSLK +L LPS+ P + R L+ L + GG R E+ Q+C + L++L + P G + + K L AL+ +L+ AA + +H A F L++A+VARR M+PE +YDLM ++ +AVTS RPT+R Q ++FLLHYPL ++ L Q + L Y +AEG +AA L L+ +L L++ + V + +V+RLV+D + AAA+ A+ LL RVS VF LL++ +W E+ GL R AAQA G+FV +RP+L ++ G G L + S + +R + ++ G G AA WE YH + +I + + LPG + L G EG L E L Y HAWVRLAA+RV G + +R G T ++ TG
Sbjct: 1199 RCVRRRVNDSIVLLSLKCLALMLRHLSSLPSLTFLTPRLVRSSLSLLSMAGGPANSRDEIVQSCLRILTILIAASGNSIEDDAPLGPLGLTQPEKRPSLPIPAKSLGALICLLRAAALDYDHVNAPFALVRALVARRAMVPE-MYDLMEQMLGIAVTSRRPTVRQMGGQIIVSFLLHYPLSSVKVAGFLQQAVRNLDYEYAEGRMAAFGLLQTLIMKLQVSMLNEHAQVVFFPMVLRLVNDPCPKTRAAAADAISALLRRVSGDVFNTLLDYQCRWMRMH-----------VENEGLARAAAQAVGLFVDSRPDLFKRGGEDGLGMELLVLFSDTLASVEKRGP--VPDVQADGLESPHEREGEAAL----------GWEMAYHCLGTISRIYARLPGMVESFLHG------FPEGMTLLSATSEILCYRHAWVRLAASRVIGQYLDRRATGGKTRTLITG 1629
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Match: A0A4D9D945_9STRA (DRIM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D945_9STRA) HSP 1 Score: 193 bits (490), Expect = 6.780e-47 Identity = 152/461 (32.97%), Postives = 231/461 (50.11%), Query Frame = 1
Query: 4 RCIGKNPHTPVVLLSLKSPGYLLHW--DLPSMKR*APLVGRHVLARL-VRGGVGGIRGEMGQACFKALSMLFKSQVQVF--GVPGEDAGRRKGRGGGLFGLSPKQLRALLVVLQMAAAETEHQYATFGLIKAVVARRVMLPEVLYDLMTKLAELAVTSHRPTLRATSCQTFLTFLLHYPLGEKRLQFHLNQIISGLSYTHAEGSLAALNLCSQLLRRLPEPNLDQLSSVFYLALVVRLVSDQAAECHAAASTAVRTLLDRVSPAVFQELLEFTGQWFGEKDAGAPLGAGWGEEDPGLRRTAAQACGIFVQARPELVRKAAGTGGGGRLPWMLSALSLMLPRRAAEVIAAARSAGWGDAGGSVGAAAEXXXXXXGADGNWEGVYHAVLSIGKAFDALPGACNAALSGGXXXXXXDEGDGLFDRLLEALLYPHAWVRLAAARVWGSFFSKRDPG--TLSVSTG 1365
RC+ + + +VLLSLK +L LPS+ P + R L+ L + GG R E+ Q+C + L++L + + P G + + K L AL+ +L+ AA + +H A F L++A+VARR M+PE +YDLM ++ +AVTS RPT+R Q ++FLLHYPL ++ L Q + L Y +AEG +AAL L L+ +L +++ + V + +V+RLV+D + AAA+ A+ LL RVS VF LL++ +W + E+ GL R AAQA G+FV +RP+L ++ G G L + S + +R + ++ G G AA WE YH + +I + + LPG + L G EG + E L Y HAWVRLAA+RV G + +R G T ++ TG
Sbjct: 2421 RCVRRRVNDSIVLLSLKCLALMLRHLSSLPSLTYLTPRLVRSSLSLLSMAGGPANSRDEIVQSCLRILTILIAASGKSIEDDEPLGPLGLPQPEKQPSLPIPAKSLGALVCLLRAAALDYDHVNAPFALVRALVARRAMVPE-MYDLMEQMLGIAVTSRRPTVRQMGGQIIVSFLLHYPLSSVKVAGFLQQAVRNLDYEYAEGRMAALGLLQTLIMKLQVSMVNEHAQVVFFPMVLRLVNDPCPKTRAAAAEAISALLRRVSGDVFNTLLDYQCRWMQMR-----------VENEGLARAAAQAVGLFVDSRPDLFKRGGEDGLGMELLVLFSDTLASVEKRGP--VPDVQADGLESPHEREGEAAL----------GWEMAYHCLGTINRIYARLPGMVESFLHG------FPEGMTILSATSEILCYRHAWVRLAASRVIGQYLDRRATGGKTRTLITG 2851 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10981.861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10981.861.1 >prot_Ecto-sp13_S_contig10981.861.1 ID=prot_Ecto-sp13_S_contig10981.861.1|Name=mRNA_Ecto-sp13_S_contig10981.861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=492bp MGQACFKALSMLFKSQVQVFGVPGEDAGRRKGRGGGLFGLSPKQLRALLVback to top mRNA from alignment at Ecto-sp13_S_contig10981:190..5611+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10981.861.1 ID=mRNA_Ecto-sp13_S_contig10981.861.1|Name=mRNA_Ecto-sp13_S_contig10981.861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5422bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10981:190..5611+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10981:190..5611+ >mRNA_Ecto-sp13_S_contig10981.861.1 ID=mRNA_Ecto-sp13_S_contig10981.861.1|Name=mRNA_Ecto-sp13_S_contig10981.861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1476bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10981:190..5611+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |