mRNA_Ecto-sp13_S_contig10980.860.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: D7FXB0_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB0_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 8.290e-160 Identity = 235/260 (90.38%), Postives = 247/260 (95.00%), Query Frame = 1
Query: 1 MAACMLFTSITTLVSCVFYIVGTYTASQYHYMVIAGEAVFAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTFTDVTVTACLLGLKILGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLIDIIGSRPKNRVGYSRHLVGNRLHVVLAMVPGKDDGEGEAGF 780
MAACMLFTSITTLVSCVFYIVGTYTA+Q+H +VIAGEAVFA+VFFMDYVLSVTAEA+WLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKV RVIRNHRMLEKIGTFTDVTV ACLLGLKILGLILMTTAIIYGTE+AFK+ +GKAF+D GTI SGTM+WHD LYFTIVTLSTVGYGDVLPV AISRMLMI VI+ ALTYVP EVGNLIDIIGSRPKNRVGYSRHLVGN+LHVVLAMVPGKDDGEGEAGF
Sbjct: 1 MAACMLFTSITTLVSCVFYIVGTYTANQHHSIVIAGEAVFALVFFMDYVLSVTAEAVWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVTRVIRNHRMLEKIGTFTDVTVNACLLGLKILGLILMTTAIIYGTEQAFKDETDGKAFDDSGTIEDSGTMQWHDCLYFTIVTLSTVGYGDVLPVTAISRMLMIVVIVVALTYVPLEVGNLIDIIGSRPKNRVGYSRHLVGNKLHVVLAMVPGKDDGEGEAGF 260
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: A0A6H5K4I5_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I5_9PHAE) HSP 1 Score: 429 bits (1103), Expect = 6.730e-138 Identity = 227/258 (87.98%), Postives = 241/258 (93.41%), Query Frame = 1
Query: 7 ACMLFTSITTLVSCVFYIVGTYTASQYHYMVIAGEAVFAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTFTDVTVTACLLGLKILGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLIDIIGSRPKNRVGYSRHLVGNRLHVVLAMVPGKDDGEGEAGF 780
+CMLFTSITTLVSCVF+IVGTYTA QY Y+VIAGEAVFA+VFF+DYVLSVTAEA+ LTYVLSFEGIVDLCSIFPVFGAFY WLYSLSFVRYLRLGKV RVIRNHR LEKIGTFTDVTV ACLLGLKILGLILMTTAIIYGTE+AFK +++GKAF XX M+WHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNL++IIGSRPKNRVGYSRHL+GNRLHVVLAMVPGKDDGEGEAGF
Sbjct: 44 SCMLFTSITTLVSCVFFIVGTYTAHQYDYIVIAGEAVFALVFFVDYVLSVTAEAVRLTYVLSFEGIVDLCSIFPVFGAFYSWLYSLSFVRYLRLGKVTRVIRNHRTLEKIGTFTDVTVNACLLGLKILGLILMTTAIIYGTEQAFKGDEDGKAFXXXXXXXXXXXMQWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLMEIIGSRPKNRVGYSRHLLGNRLHVVLAMVPGKDDGEGEAGF 301
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: A0A6H5JQ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ48_9PHAE) HSP 1 Score: 220 bits (560), Expect = 8.380e-62 Identity = 123/254 (48.43%), Postives = 166/254 (65.35%), Query Frame = 1
Query: 10 CMLFTSITTLVSCVFYIVGTYTASQYHYMVIAGEAVFAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTFTDVTVTACLLGLKILGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLIDIIGSRPKNRVGYSRHLVGNRLHVVLAMVPGKDDGEGE 771
CML S+ TL SC+FYI+ TY + I E F ++F +DY L+ A + L Y L G++DL S P FG+F W+ SLSFVRYLR+GK RV+RNH++L I DVT+ A LL +K++G+++MT+AI+YG E + + AF + G +WHD+ YFTIVTLSTVGYGDVLP+ +SR+LM+ VI+ ALTY+P EVG L+D + +RPK R G+ LVG LHVVLAM G+D + E
Sbjct: 62 CMLLLSLATLSSCLFYILATYVHDRPWVGHI--ETSFGILFLVDYSLTAAAAPVPLAYALGKGGLIDLVSCLPAFGSFQPWMASLSFVRYLRVGKAIRVMRNHKLLASIFPNDDVTIKATLLIVKVIGVVMMTSAILYGVERGPTDAEGTGAFNEPG-------WQWHDAFYFTIVTLSTVGYGDVLPISVVSRLLMVCVIIFALTYIPLEVGELVDAVNARPKFRAGFPHSLVGKHLHVVLAM-SGEDSADSE 305
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: A0A836CM81_9STRA (Ion_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM81_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.370e-38 Identity = 94/272 (34.56%), Postives = 145/272 (53.31%), Query Frame = 1
Query: 34 TLVSCVFYIVGTY--TASQYHYMVIAGEAV--------------------FAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKI--GTFTDVTVTACLLGLKILGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLIDIIGSRPKNRVGYSRHLVGNRLHVVLAMVPGKDDGEGEAG 777
T++SC+ Y++ TY T++ Y + G + + F +D+ LS+ L YV S+ G+VD+ SI P+ + +Y LSF R+LRL K ++R HR+ + + G D++ LLG+K+ GLI + T+I+Y EA N +G ++ T+ + WHD+ YFTIVTLSTVGYGD+ P ++RM+M+ +I+A+ +P EV L D S P+ RV Y + G LHV++A G G AG
Sbjct: 54 TVLSCILYVIFTYFRTSTSTEYSDVNGNPLPGHVDDPYHMDNIATWIQESITITFVVDFALSLVIAPSALRYVFSWPGLVDILSIIPILEPLKQGIYVLSFTRFLRLTKAFTILRQHRLRKGVLAGEAADLSFNVFLLGVKLAGLIFIATSIVYALAEA--PNIKGFSYMVDDTVVHQ-IVEWHDAFYFTIVTLSTVGYGDITPKTWLARMVMVFIIMASFIIIPLEVARLADAYSSVPRFRVAYK--MAGKALHVIIATSSGGGYGGAAAG 320
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: D8LEK1_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK1_ECTSI) HSP 1 Score: 145 bits (367), Expect = 4.750e-38 Identity = 82/181 (45.30%), Postives = 116/181 (64.09%), Query Frame = 1
Query: 13 MLFTSITTLVSCVFYIVGTYTASQYHYMVIAGEAVFAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTFTDVTVTACLLGLKILGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVG 555
MLF S+ TL SC+FYI+ TY ++ + E + ++F +DY L+V A + L Y L G++DL S P FG+F W+ SLSFVRYLR+GK RV+RNH++L I DVT+ A LL +K++G+++MT+AI+YG E + + AF + G +WHD+ YFTIVTLSTVG
Sbjct: 1 MLFLSLATLSSCLFYILATYLHDRHWVRHV--ETGYGILFLVDYSLTVVAAPIPLAYALGKGGLIDLVSCLPAFGSFQPWMASLSFVRYLRVGKAIRVMRNHKLLASIFPNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPG-------WQWHDAFYFTIVTLSTVG 172
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: A0A2R6XTC0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XTC0_MARPO) HSP 1 Score: 91.7 bits (226), Expect = 2.840e-17 Identity = 67/237 (28.27%), Postives = 118/237 (49.79%), Query Frame = 1
Query: 37 LVSCVFYIVGTYTASQYHYMVIAGEAVFAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTF-TDVTVTACLLGLKILGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLIDIIGSRPKNRVGYSRHLVGNRLHVVLAMV 744
L+S V Y+ TY + V + V +V F DY++ V E + L Y++SF G++D S+ PV F + S +R L+ R++R + ++G F + V LL + G+I + I++ + E D + T G + + ++ YF IVT+STVGYGD+ P + +++ I I+ ALT +P ++G + + RP +R +VG+R ++ +
Sbjct: 181 LMSGVLYVYSTYRREAQNNWVSQTQNVISVAFLADYIMRVYCEPVRLYYLVSFWGVIDFLSVVPVILVFRSFPTVDSVIRLLQF---VRILRLFALSYRVGLFGSSVMQQIILLTIATFGVIFLDAGILH-----WVEYDVAPSVRKD-TCPEQGCITFWEAFYFLIVTVSTVGYGDITPKTVLGQLVTIVTIVVALTILPLQIGRITTLAYRRPYGGSYSARKIVGSRFLIISGSI 408
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: A0A2I8AAN7_9NOSO (Ion transporter n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A2I8AAN7_9NOSO) HSP 1 Score: 80.5 bits (197), Expect = 2.640e-14 Identity = 52/187 (27.81%), Postives = 101/187 (54.01%), Query Frame = 1
Query: 109 EAVFAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTFTDVTVTACLLGLKIL----GLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLI 657
+ + ++F ++Y+L + + + Y+ SF I+DL +I P F+ L +SF+R LR ++ R+IR ++K F++++ ++ ++IL +I + + +IY E G D+ YF++VT++TVG+GDV P+ + R+L + +IL +T +P++VG+LI
Sbjct: 57 DKIILIIFAVEYILRLWSAENKINYIFSFYAIIDLLAILP----FFIGLVDISFIRLLRWFRILRLIR---FIDKKFLFSNLSTADSIISIRILFTLFAIIFVYSGLIYQVEHPVNPQVYGTFL---------------DAFYFSVVTMTTVGFGDVTPISELGRLLTVLMILTGVTLIPWQVGDLI 221
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: A0A176WRD8_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WRD8_MARPO) HSP 1 Score: 82.8 bits (203), Expect = 2.940e-14 Identity = 69/237 (29.11%), Postives = 114/237 (48.10%), Query Frame = 1
Query: 28 ITTLVSCVFYIVGTYTASQYHYMVIAGEAVFAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTFTDVTVTACLLGLKI--LGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLIDIIGSRPKNRVGYSRHLVGNRLHVV 732
I L S + Y+ TY Y++I E V V F +DYV+++ + + L Y++S G+VDL S+ P+ + W +F + L RV+R +L IG + T+T + L + G+I + ++ E + + G + + + YF IVT+STVGYGD+ P R + I ILAAL +P +V N++ + RP + +VG+R +V
Sbjct: 185 IAALTSVIVYVRSTYNYETPPYVIIV-ETVCGVFFLIDYVINLFSAPVRLYYIISATGLVDLLSVLPIA---FLWSKKKNFGVEILL--FLRVLRIMPVLTSIG-LSGATITQQIFRLVVYAFGVIFIAAGLLQWVEYRASTTQ----YREDNNCSPKGCLTFFGAFYFMIVTISTVGYGDITPKSDWGRAVAILAILAALIILPAQVNNIMQLASRRPYGGYFAVKKVVGSRFIIV 410
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: A0A4P9WVJ2_9FUNG (Uncharacterized protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9WVJ2_9FUNG) HSP 1 Score: 82.4 bits (202), Expect = 3.990e-14 Identity = 70/233 (30.04%), Postives = 116/233 (49.79%), Query Frame = 1
Query: 55 YIVGTYT---ASQYHYMVIAGEAVFAVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFP--VFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTFTDVTVTACLLGLKILGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLIDII-GSRPKNRVGYSRHLVGNRLHVVL 735
YIV TYT A + H + +AV A+ F DYVL + L + S +VDL S P ++ L + F+ LR+ + +R++R +R+L + +T +L L + + ++ +I+ E +E+ + S T RWHDSLY+ +VT ST+G+GD+ P + SR++++ + +VP + G L DI S P R Y H+ + HV+L
Sbjct: 191 YIVLTYTIGNADRSHIEYL--DAVIAICFLADYVLGIYVAQDRLAFYFSLGAMVDLVSSVPPLIYILISDALPYIWFLGLLRILRASRILRTYRLLSFSESEERRELT--ILALSFINFVFLSASIVNALETLHEES-----------VPPSLT-RWHDSLYYIMVTFSTIGFGDLTPSSSTSRLVVMVXXXXXIIWVPIQTGRLADIYKSSSPFQRAAY--HVSSSNSHVIL 405
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Match: UPI000D1C4E20 (calcium-activated potassium channel subunit alpha-1-like n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C4E20) HSP 1 Score: 81.3 bits (199), Expect = 9.350e-14 Identity = 60/205 (29.27%), Postives = 98/205 (47.80%), Query Frame = 1
Query: 121 AVVFFMDYVLSVTAEAMWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVARVIRNHRMLEKIGTF-TDVTVTACLLGLKILGLILMTTAIIYGTEEAFKENDEGKAFEDGGTIXXSGTMRWHDSLYFTIVTLSTVGYGDVLPVMAISRMLMIAVILAALTYVPFEVGNLIDIIGSRPKNRVGYSRHLVGNRLHVV 732
+V F DYVL + +E L Y+ S G+VDL S P+F F Y + L + R++R + K+G + +T LL G +++ II E G + + G M + D+ YF IVT++TVGYGDV+PV + +I I+ A+ +P +V + + +RP SR ++G+R ++
Sbjct: 19 SVAFLADYVLRIYSEPARLFYIFSLSGLVDLLSAIPIFNVF---RYRKAGGDVYNLLQFLRIVRISSCITKLGMAGSTLTQQIILLIFSTAGAVVLVAGIIQWLEY------HGASEKTKRMCPLEGCMSFWDAFYFVIVTIATVGYGDVVPVTIQGQAAIIITIMIAVAILPIQVSRISTLAYNRPYGGTFNSRKVLGSRFLII 214 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10980.860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10980.860.1 >prot_Ecto-sp13_S_contig10980.860.1 ID=prot_Ecto-sp13_S_contig10980.860.1|Name=mRNA_Ecto-sp13_S_contig10980.860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp MAACMLFTSITTLVSCVFYIVGTYTASQYHYMVIAGEAVFAVVFFMDYVLback to top mRNA from alignment at Ecto-sp13_S_contig10980:3..4613- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10980.860.1 ID=mRNA_Ecto-sp13_S_contig10980.860.1|Name=mRNA_Ecto-sp13_S_contig10980.860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4611bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10980:3..4613- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10980:3..4613- >mRNA_Ecto-sp13_S_contig10980.860.1 ID=mRNA_Ecto-sp13_S_contig10980.860.1|Name=mRNA_Ecto-sp13_S_contig10980.860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10980:3..4613- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |