mRNA_Ecto-sp13_S_contig10973.852.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Match: D7FXJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ3_ECTSI) HSP 1 Score: 599 bits (1544), Expect = 8.700e-213 Identity = 314/345 (91.01%), Postives = 319/345 (92.46%), Query Frame = 1
Query: 1 APCEHPGSPSFAASRVATS-VILLLGVIVGKASGWKECLVSPQDAWKAATDTTPALRMRYDYERRYTCSDEKASFLAASYLFNSTCTARQFSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKVITEDGKRYFTLVDCWHPSISGVERCYDYSTSDFPGPTTLGQPGDGPSAEATKQSRKNMARSTTSSTKRRSSLGGTKADSXXXXXXXXXXXXXXXXXXXXARGWEDGQEAAEEAEAEGYGEEVEAVDESEISVHMRMLSKPSGENWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDVFKRDVFPILDEMAVLGEKATVVWR 1032
AP E P SPSFAASRVATS VIL LGVIVGKASGW ECL+ PQDAWKAATDTTPALRMRYDYERRYTC DEKASFLAASY+FNSTCTAR+FSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKVITEDGKRY+TLVDCWHPSI GVERCYDYSTSDFPGPTTLGQPGDGPS EAT QSRKNMARSTTS KRR LGGTKADS XXXXXXXXXXXX AR WEDGQEAAEEAEAEGY EEVEAVDESEISVHMRMLSKPSGE+WLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDD FKRDVFPILDEMAVLGEKATVVWR
Sbjct: 11 APGERPASPSFAASRVATSSVILFLGVIVGKASGWVECLMPPQDAWKAATDTTPALRMRYDYERRYTCRDEKASFLAASYVFNSTCTARRFSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKVITEDGKRYYTLVDCWHPSIKGVERCYDYSTSDFPGPTTLGQPGDGPSGEATTQSRKNMARSTTSPAKRRPPLGGTKADSTKSVXXXXXXXXXXXXRKMQAREWEDGQEAAEEAEAEGYREEVEAVDESEISVHMRMLSKPSGEHWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDSFKRDVFPILDEMAVLGEKATVVWR 355
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Match: A0A6H5KLA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA9_9PHAE) HSP 1 Score: 531 bits (1367), Expect = 1.040e-185 Identity = 280/365 (76.71%), Postives = 291/365 (79.73%), Query Frame = 1
Query: 1 APCEHPGSPSFAASRVATSVILLLGVIVGKASGWKECLVSPQDAWKAATDTTPALRMRYDYERRYTCSDEKASFLAASYLFNSTCTARQFS--GPPDVVSCL-------------------KGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKVITEDGKRYFTLVDCWHPSISGVERCYDYSTSDFPGPTTLGQPGDGPSAEATKQSRKNMARSTTSSTKRRSSLGGTKADSXXXXXXXXXXXXXXXXXXXXARGWEDGQEAAEEAEAEGYGEEVEAVDESEISVHMRMLSKPSGENWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDVFKRDVFPILDEMAVLGEKATVVWR 1032
AP E P SPSFAASRVATSVIL LGV+VGKASGWKECLVSPQDAWKAATDTT ALRMRY+YERRYTC DEK + + NS AR+ S PP V+SCL KGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTK N RNAKVITEDGKRY+TLVDCWHPSISGVERCYDYSTSDFPGPTT GQPGDGPS EA KQSRK + RST SSTKR +SLGG KADS R WEDGQEAAEEAEAEGYGEEVEAVDE+EISVHMRMLSKPSGE+WLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDD FKRDVFPILDEMAVLGEKATVVWR
Sbjct: 4 APGERPTSPSFAASRVATSVILFLGVVVGKASGWKECLVSPQDAWKAATDTTAALRMRYEYERRYTCRDEKGALQGPTP--NSLAHARRKSDDSPPLVLSCLDANSLKRLNKESTSMQVCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKENLRNAKVITEDGKRYYTLVDCWHPSISGVERCYDYSTSDFPGPTTFGQPGDGPSGEARKQSRKKVFRSTPSSTKRSTSLGGRKADSTKSASTEGDNSRNKHGRKLQPREWEDGQEAAEEAEAEGYGEEVEAVDENEISVHMRMLSKPSGEHWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDSFKRDVFPILDEMAVLGEKATVVWR 366
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Match: D7FL04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL04_ECTSI) HSP 1 Score: 380 bits (977), Expect = 2.070e-126 Identity = 204/372 (54.84%), Postives = 246/372 (66.13%), Query Frame = 1
Query: 1 APCEHPGSP-SFAASRVAT-SVILLLGVIVGKASGWKECLVSPQDAWKAATD--TTPALRMRYDYERRYTCSDEKASFLAASYLFNSTCTARQFSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKVITEDGKRYFTLVDCWHPSISGVERCYDYSTSDFPGPTTLGQPGDGPSAEATKQSRKNMARSTTSSTKRRSSLGG--TKADSXXXXXXXXXXXXXXXXXXXXARGWEDGQEAAEEAEAE----------------------GYGEEVEAVDESEISVHMRMLSKPSGENWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDVFKRDVFPILDEMAVLGEKATVVWR 1032
AP + P +P SFAAS + SV LGV+VGKASGWKEC VSP+D W A +T ALRMR+DYERRYTC + AS+LAASY F+S CTAR+F PPDV SCLKGRRVIFLGDSLSNQQGDSL+GMLGWHPDWMTKG PRN+K+ EDG ++FTLVDC+HPS+ G++RCYDYSTS FP P D P + + +K++ TSS K + S+ G T A R W G+ +E E E YGE + VD +EISVHMRMLS+PSGE+WL +A SDFNETRASD+FVVNFGGHYHD PE+D+ FK D+ P+L +MAVLG+ ATV+WR
Sbjct: 12 APGKRPATPPSFAASGLLVPSVFWFLGVVVGKASGWKECSVSPEDRWSPAPSRTSTAALRMRFDYERRYTCDSKHASYLAASYYFDSPCTARRFPSPPDVTSCLKGRRVIFLGDSLSNQQGDSLMGMLGWHPDWMTKGAPRNSKLDIEDGSKHFTLVDCYHPSLGGIQRCYDYSTSAFPPPAA----SDHPVSREKSRKKKSIRAGATSSEKVKLSMRGRTTTAIKTAQTKGTRGLGHKRRKSQRHGRWWXXGEGHGQEEEEEVEXXXXXXXXXXXXXXXXXXXXXYGETFD-VDGNEISVHMRMLSRPSGEHWLLKAASDFNETRASDVFVVNFGGHYHDIPEDDEEFKTDMIPVLQDMAVLGQNATVIWR 378
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Match: A0A6H5JEC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC7_9PHAE) HSP 1 Score: 276 bits (705), Expect = 6.630e-86 Identity = 176/341 (51.61%), Postives = 213/341 (62.46%), Query Frame = 1
Query: 40 SRVATSVILLLGVIVGKAS----GWKECLVSPQDAWKAATDTTPALRMRYDYERRYTCSD-EKASFLAASYLFNSTCTARQFSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAK-VITEDGKRYFTLVDCWHP---SISGVERCYDYSTSDFPGPTTLGQPGDGPSAEATKQSRKNMA-RSTTSSTKRRSSLGGTKADSXXXXXXXXXXXXXXXXXXXXARGWEDGQEAAEEAEAEGYGEEVEAVDESEISVHMRMLSKPSGENWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDVFKRDVFPILDEMAVLGEKATVVWR 1032
SR T ++L+L + + AS GW EC +SPQD WK AT+ T A+RMR +YER YTC+ E ASF+AA+Y F+S C A++F P DV CL+GRRVIFLGDSLSNQQGDSL+GMLGWHP+WM +G PRN K + +DG RYFTLVDCWHP SI G+ERCYD +DFP PG PS E + + A ST RR+ + D XXXXXXXXXXXXXXXX + SVH+RM S +WL RA+ D+NETRASD+ VVNFG HY PE ++ FKRDV ILD+MA +GE ATVVWR
Sbjct: 32 SRATTELVLVL-IFLTVASPTGWGWNECSISPQDEWKEATEDTLAMRMRAEYERMYTCTTREDASFMAANYYFDSPCLAKRFFYPTDVRECLRGRRVIFLGDSLSNQQGDSLVGMLGWHPEWMPRGGPRNRKRAVRKDGTRYFTLVDCWHPPGGSIPGIERCYDVYDTDFPFEGNHRSPGK-PSLEIHGSTTDDGAFASTEGKHDRRTRRRSLEGDEGGVEXXXXXXXXXXXXXXXXTKA------------------------NQTTSVHVRMTSTADDRHWLRRALRDYNETRASDVVVVNFGPHYRSTPEGEESFKRDVSSILDDMAEIGETATVVWR 346
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Match: D7FKZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ3_ECTSI) HSP 1 Score: 203 bits (516), Expect = 3.370e-61 Identity = 101/147 (68.71%), Postives = 115/147 (78.23%), Query Frame = 1
Query: 1 APCEHPGSP-SFAASRVATSVIL-LLGVIVGKASGWKECLVSPQDAWKAATD--TTPALRMRYDYERRYTCSDEKASFLAASYLFNSTCTARQFSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKVIT 429
AP + P +P S AAS + + LGV+VGKASGWKEC VSP+D W A +T ALRMR+DYERRYTC + AS+LAASY F+S CTAR+F PPDV SCLKGRRVIFLGDSLSNQQGDSL+GMLGWHPDWMTKG PRN+KV T
Sbjct: 22 APGKRPATPPSLAASGLLVPFVFWFLGVVVGKASGWKECSVSPEDRWSPAPSRTSTAALRMRFDYERRYTCDSKHASYLAASYFFDSPCTARRFPFPPDVTSCLKGRRVIFLGDSLSNQQGDSLMGMLGWHPDWMTKGAPRNSKVET 168
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Match: D7G6G2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G2_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.150e-29 Identity = 117/301 (38.87%), Postives = 149/301 (49.50%), Query Frame = 1
Query: 223 LAASYLFNSTCTARQFSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKVITEDGKRYFTLVDCWHP---SISGVERCYDYSTSDFPGPTTLGQPGDGPSAEATKQSRKNMARSTTSST----KRRSSLGGTKAD--------------------SXXXXXXXXXXXXXXXXXXXXARGWEDGQE----AAEEAEAEGYGEEVEAVDESEISVHMRMLSKPSGENWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDVFKRDVFPILDEMAVLGEKATVVWR 1032
+AA+Y F+S C A++F P DV + + EDG YFTLVDCWHP SI+G+ERCYD +DFP +PG P E + K+ A ++T +R SL G + XXXXXXXXXXXXXXXXXXXX G E ++ E EG E +++ SVH+RM S ++WL RA+ D+NETRASD+ VVNFG HY PE ++ FKRDV ILD+MA +GE ATVVWR
Sbjct: 1 MAANYYFDSPCLAKRFFYPADV------------------------------------------REAVREDGTSYFTLVDCWHPPGGSITGIERCYDVYETDFPSEGNYRRPGK-PFLEGHVSTTKDRASASTGGNHDRRNKRRSLEGDEGGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEXXXXXXXGGVKKGEKEGEEGETTKANQT-TSVHVRMTSAADDQHWLRRALRDYNETRASDVVVVNFGAHYRSTPEGEESFKRDVSSILDDMAEIGETATVVWR 257
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Match: D7FKZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ2_ECTSI) HSP 1 Score: 119 bits (298), Expect = 1.170e-28 Identity = 50/70 (71.43%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 823 MRMLSKPSGENWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDVFKRDVFPILDEMAVLGEKATVVWR 1032
MRMLS+P GE+WL +A SDFNETRASD+FVVNFGGHYHD PE+D+ FK D+ P+L +MAVLG+ ATV+WR
Sbjct: 1 MRMLSRPRGEHWLLKAASDFNETRASDVFVVNFGGHYHDIPEDDEEFKTDMIPVLQDMAVLGQNATVIWR 70
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Match: D8LML8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML8_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 6.200e-18 Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 829 MLSKPSGENWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDVFKRDVFPILDEMAVLGEKATVVWR 1032
M S ++WL RA+ D+NETRASD+ VVNFG HY PE ++ FKRDV ILD+MA +GE ATVVWR
Sbjct: 1 MTSAADDQHWLRRALRDYNETRASDVVVVNFGAHYRSTPEGEESFKRDVSSILDDMAEIGETATVVWR 68 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10973.852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10973.852.1 >prot_Ecto-sp13_S_contig10973.852.1 ID=prot_Ecto-sp13_S_contig10973.852.1|Name=mRNA_Ecto-sp13_S_contig10973.852.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp APCEHPGSPSFAASRVATSVILLLGVIVGKASGWKECLVSPQDAWKAATDback to top mRNA from alignment at Ecto-sp13_S_contig10973:1404..5344+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10973.852.1 ID=mRNA_Ecto-sp13_S_contig10973.852.1|Name=mRNA_Ecto-sp13_S_contig10973.852.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3941bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10973:1404..5344+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10973:1404..5344+ >mRNA_Ecto-sp13_S_contig10973.852.1 ID=mRNA_Ecto-sp13_S_contig10973.852.1|Name=mRNA_Ecto-sp13_S_contig10973.852.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1032bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10973:1404..5344+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |