mRNA_Ecto-sp13_S_contig10930.831.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: A0A6H5KF62_9PHAE (ALDH protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF62_9PHAE) HSP 1 Score: 495 bits (1274), Expect = 1.650e-171 Identity = 257/286 (89.86%), Postives = 266/286 (93.01%), Query Frame = 1
Query: 1 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAITSCKQSFSYNSYGGALPST 858
RVMAAAAKAGPTDVHLELGGKSAMIVFDDVE+VEAAVDWAC+GIFSNSGQ RV ATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVT+AVEGGAT+ISGDGAD N AV KPAVGYYVSPTILSEVSDEN VWDSE+FGPVLCVRRFEEESEAIEAANRSEFGLAASVMSS++ERCK+VSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAITSCKQ+FSYNSYGGA ST
Sbjct: 292 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEQVEAAVDWACIGIFSNSGQ---RV-----------ATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTRAVEGGATIISGDGADRNAAVQKPAVGYYVSPTILSEVSDENEVWDSEVFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSDEERCKKVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAITSCKQTFSYNSYGGASRST 563
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: A0A6H5JQK1_9PHAE (Aldedh domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQK1_9PHAE) HSP 1 Score: 332 bits (851), Expect = 2.130e-108 Identity = 172/285 (60.35%), Postives = 218/285 (76.49%), Query Frame = 1
Query: 1 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRG-RDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDG----ADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAITSCKQSFSYNSYG 840
+VMAAAA GP VHLELGGK AMIVFDD+E+++A VDW C+GIF NSGQVC ATSRLL+ SKI+D+VV+ +++RA+ ++VG P+R ++A G CMGPLVSGPQ+++VLGF+++AV+ GA V+ G G AD KP GYYVSPT+L+ V + + W +EIFGPVLCVR+FEEE EA+ AAN SEFGLAASVMS++++RC+RV+RALR G+VW+NCSQ A ++APWGG+KKSG G RELGRWGL+ FLGVK ITSC SFSY YG
Sbjct: 228 KVMAAAA-GGPAGVHLELGGKGAMIVFDDIEDIDATVDWICMGIFFNSGQVCS-------------ATSRLLLHSKIHDKVVAKILERAASVTVGAPLRDDDKEAEGTCMGPLVSGPQRDKVLGFISRAVDAGAKVLCGGGPPPDADAASTDRKPGKGYYVSPTVLTGVKETDEAWTAEIFGPVLCVRQFEEEDEALAAANNSEFGLAASVMSADKDRCERVARALRVGIVWQNCSQPAFIQAPWGGYKKSGFG-RELGRWGLEAFLGVKQITSCAGSFSYEWYG 497
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: A0A2S9IF87_9GAMM (Aldehyde dehydrogenase n=4 Tax=Erwiniaceae TaxID=1903409 RepID=A0A2S9IF87_9GAMM) HSP 1 Score: 226 bits (577), Expect = 2.180e-67 Identity = 130/268 (48.51%), Postives = 178/268 (66.42%), Query Frame = 1
Query: 1 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAIT 804
++M AAA A +V LELGGKSA I+FDD ++E AV+W GIF N G+VC ATSR+LVQ +YD +++ +V+ A RI +G+ M A G +GPLV+ Q E+V + + +E GAT++SG P H GY++ PTI ++VS+E+ +W EIFGPV+CVR F++E+EA+ +ANRS FGLAA+VMS + R +RV+R LRAG+VW NCSQ EAPWGG+K+SG+G RELG WGL+ +L K IT
Sbjct: 239 KIMQAAA-AEIKNVSLELGGKSAFIIFDD-SDIEKAVEWILFGIFWNKGEVCS-------------ATSRVLVQRNLYDALLARLVEEAERIRIGNGM-----ADGVLLGPLVNAAQYEKVQTAIARGIEQGATLLSGGK---RPNGHDK--GYFLQPTIFTDVSEESDIWREEIFGPVVCVRAFDDEAEAVASANRSRFGLAAAVMSPDLARAERVARRLRAGIVWINCSQPTFTEAPWGGYKQSGIG-RELGEWGLNNYLETKQIT 480
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: A0A7S3M7M9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7M9_9STRA) HSP 1 Score: 226 bits (577), Expect = 2.630e-67 Identity = 128/281 (45.55%), Postives = 173/281 (61.57%), Query Frame = 1
Query: 1 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRG-RDAPGPCMGPLVSGPQKERVLGFVTQA-VEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAITSCKQSFSYNSY 837
R+MAAAA AGP V +ELGGKS +IVF+D + + AVDW GI NSGQVC ATSR+LV S I + +++ +VDR I +GD + GP MGP+VS PQ +++ + +A EG + GD A +V GYY+ PTI + + VW+ EIFGPVLC+R F E EA+ AN SE+GLA +V S++ RC R++R LR G++W+NC Q A ++APWGG K+SG G RELGRWG++EF VK +T C +S+ Y
Sbjct: 241 RIMAAAA-AGPRAVSMELGGKSPLIVFEDAD-INGAVDWIITGILWNSGQVCS-------------ATSRVLVHSSIREALLARLVDRVKEIKIGDQQSAEFLEHKGPSMGPVVSKPQFDKIWAAIDEAKAEGHKLLFGGDRA----SVAHLGAGYYIPPTIFVDTPTTSKVWNEEIFGPVLCIREFSTEEEAVCVANDSEYGLAGAVFSADAARCDRIARNLRVGILWKNCCQPAFIQAPWGGVKRSGFG-RELGRWGMEEFTAVKQVTGCASGYSWELY 501
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: A0A4S3MIX9_9RHOB (Aldehyde dehydrogenase family protein n=1 Tax=Gemmobacter aestuarii TaxID=1445661 RepID=A0A4S3MIX9_9RHOB) HSP 1 Score: 226 bits (576), Expect = 2.780e-67 Identity = 129/269 (47.96%), Postives = 175/269 (65.06%), Query Frame = 1
Query: 1 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAITS 807
R+MAAAA+ ++ LELGGKS ++F D ++E AV+W GIF N GQVC ATSR+LV+ +Y ++ +V A RI++GD + +G +GPLV+ Q +VLGF+ +A GATV G A+G A GY+V+PT+L++V VW EIFGPV+C+R F+ E EA++ AN S FGLAA+VMS+++ RC+RV+RA RAG+VW NCSQ EAPWGG K+SG+G RELGRWGLD +L K IT+
Sbjct: 236 RLMAAAAR-DIKNISLELGGKSPFVIFAD-SQIEKAVEWIMFGIFWNQGQVCS-------------ATSRVLVERSLYPALLERLVAEARRITIGDGLEQGT-----LLGPLVNEQQYRKVLGFIDRARADGATVACGGRAEGF------AKGYFVAPTVLTDVPPTAEVWTEEIFGPVVCIRPFDTEDEAVQMANDSRFGLAAAVMSADKARCERVARAFRAGIVWINCSQPTFTEAPWGGMKQSGIG-RELGRWGLDNYLETKQITA 477
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: UPI001EFA3B28 (aldehyde dehydrogenase family protein n=1 Tax=Brenneria sp. 4F2 TaxID=2800386 RepID=UPI001EFA3B28) HSP 1 Score: 225 bits (573), Expect = 8.540e-67 Identity = 129/264 (48.86%), Postives = 170/264 (64.39%), Query Frame = 1
Query: 22 KAGPTD---VHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAIT 804
+AG D V LELGGKSA IVFDD +++AAV+W GIF N GQVC ATSRLLVQ+ +Y++++ ++D A RI +G+ ++G +GPLVS Q ++VL + Q + GAT+ A G H G++V PTI + + +W EIFGPVL VRRF++E EA+ AN S FGLAA+VMS++ ERC+RVSRALRAG+VW NCSQ +APWGG+K+SG+G RELG WGLD +L K IT
Sbjct: 239 RAGAQDIKNVSLELGGKSAFIVFDD-SDIDAAVEWTLFGIFWNQGQVCS-------------ATSRLLVQAGVYERLIERLIDAARRIPIGEGGQQGVK-----LGPLVSEQQYQKVLQAIEQGLREGATL-----ACGGRRPHHLTQGWFVEPTIFLDTPTHSALWAEEIFGPVLAVRRFQDEDEAVRLANDSRFGLAAAVMSADPERCRRVSRALRAGIVWVNCSQPTFTQAPWGGYKQSGIG-RELGVWGLDNYLETKQIT 477
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: A0A2N5E3Y0_9GAMM (Aldehyde dehydrogenase n=1 Tax=Chimaeribacter coloradensis TaxID=2060068 RepID=A0A2N5E3Y0_9GAMM) HSP 1 Score: 224 bits (572), Expect = 1.200e-66 Identity = 130/268 (48.51%), Postives = 177/268 (66.04%), Query Frame = 1
Query: 1 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAIT 804
++M AAA A +V LELGGKSA IVFDD ++E AV+W GIF N G+VC ATSR+LVQ +YD +++ + + A RI+ G+ M G +GPLV+ Q E+V + + E GAT++SG P + K GY++ PTI +E+S+E+ +W EIFGPV+CVR FE+E+EA+ +ANRS FGLAA+VMS++ R +RV+R LRAG+VW NCSQ EAPWGG+K+SG+G RELG WGL+ +L K IT
Sbjct: 239 KIMQAAA-ADIKNVSLELGGKSAFIVFDD-SDIEKAVEWILFGIFWNKGEVCS-------------ATSRVLVQRNLYDALLARLAEEAERITPGNGMEAGV-----LLGPLVNAAQYEKVKQAIARGAEQGATLLSGGKRP--PGLEK---GYFLQPTIFTEMSEESDLWREEIFGPVVCVRPFEDEAEAVASANRSRFGLAAAVMSADLARAERVARKLRAGIVWVNCSQPTFTEAPWGGYKQSGIG-RELGEWGLNNYLETKQIT 480
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: UPI001FFFFE09 (aldehyde dehydrogenase family protein n=1 Tax=Bradyrhizobium sp. 191 TaxID=2782659 RepID=UPI001FFFFE09) HSP 1 Score: 224 bits (570), Expect = 1.580e-66 Identity = 131/268 (48.88%), Postives = 174/268 (64.93%), Query Frame = 1
Query: 37 DVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAITSCKQSFSYNSYG 840
+V LELGGKS IVFDD + +EAAV+W +GIF N GQVC ATSRL+VQ I D+++ +V+RA I +G G D P +GPLVS Q ERV FV Q VE GA +++G G V A GY++ PTI ++V + +W EIFGPVL V++F +E +A+ AN S FGLAA+VMS ++ RC+RV+RA RAG+VW NCSQ +APWGG+K+SG+G RELGRWGL +L VK +T K+ +++ YG
Sbjct: 228 NVSLELGGKSPFIVFDDAD-IEAAVEWIMLGIFWNQGQVCS-------------ATSRLIVQEGIADRLLKRLVERARSIPIGS----GLD-PSTKLGPLVSRGQYERVRQFVAQGVESGARLLTG----GKRPVDV-ARGYFIEPTIFTDVPLNSTIWRDEIFGPVLVVQKFSDEQQALRLANDSRFGLAAAVMSEDETRCQRVARAFRAGIVWINCSQPTFSQAPWGGYKQSGIG-RELGRWGLGNYLEVKQVTRFKRGHTWDWYG 470
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: UPI0012FA8E46 (aldehyde dehydrogenase family protein n=1 Tax=Azohydromonas aeria TaxID=2590212 RepID=UPI0012FA8E46) HSP 1 Score: 224 bits (571), Expect = 1.610e-66 Identity = 135/268 (50.37%), Postives = 173/268 (64.55%), Query Frame = 1
Query: 1 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAIT 804
++MAAAA+ V LELGGKS IVFDD + V AV+W GIF N GQVC ATSR+LVQ +YD+++ +V A RI +G+ G D G +GPLVS Q ++VL V+QA E GATV +G A G A GY++ PT+L +V ++ W+ EIFGPV+CVRRF +E EA+ AN S FGL A+VMS++ ER +RV+ ALRAG+VW NCSQ EAPWGG+K+SG+G RELG WGLD +L K IT
Sbjct: 237 KIMAAAAR-DIKKVSLELGGKSPFIVFDDAD-VAQAVEWIMFGIFWNQGQVCS-------------ATSRVLVQDGLYDKLLERLVQEARRIKIGN----GLDD-GTLLGPLVSKGQFDKVLSAVSQAQEEGATVATGGRAAGGFAA-----GYFMEPTVLVDVPLDSAAWNEEIFGPVVCVRRFSDEGEAVRLANDSIFGLGAAVMSTDSERAERVAAALRAGIVWINCSQPTFTEAPWGGYKQSGIG-RELGHWGLDNYLETKQIT 478
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Match: UPI0014135EBB (aldehyde dehydrogenase family protein n=1 Tax=Rhizobium sp. CRIBSB TaxID=2683264 RepID=UPI0014135EBB) HSP 1 Score: 224 bits (571), Expect = 1.610e-66 Identity = 124/279 (44.44%), Postives = 182/279 (65.23%), Query Frame = 1
Query: 1 RVMAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCRRVLKALVLLIILRATSRLLVQSKIYDQVVSSVVDRASRISVGDPMRRGRDAPGPCMGPLVSGPQKERVLGFVTQAVEGGATVISGDGADGNPAVHKPAVGYYVSPTILSEVSDENGVWDSEIFGPVLCVRRFEEESEAIEAANRSEFGLAASVMSSNQERCKRVSRALRAGVVWENCSQCAPVEAPWGGFKKSGVGGRELGRWGLDEFLGVKAITSCKQSFSYNSY 837
++MAAAA+ +V LELGGKS +VF D ++E AV+W GIF N GQVC ATSR+LV+ +Y ++ ++ A++I +GD + G +GPLVS Q ++++ + QA + GATV G P H+ +GY++ PTIL+++++++ +W E+FGPV+CV+ F +E++AI AN S FGLAA+VMS ++ RC+RV+RALRAG+VW NCSQ EAPWGG+K+SG+G RELG+WGLD +L VK +T+ Q + Y
Sbjct: 237 KIMAAAAR-DIKNVSLELGGKSPFLVFAD-SDIEKAVEWIMFGIFWNQGQVCS-------------ATSRILVEEALYPALMQRLIQEAAKIRIGDGLDEGT-----LLGPLVSSGQYQKIIAMIEQARDHGATVAYGGK---RPEQHQ--IGYFLEPTILTDMAEDSIIWREEVFGPVVCVKTFRDEADAIRMANDSRFGLAAAVMSGDEARCERVARALRAGIVWINCSQPTFTEAPWGGYKQSGIG-RELGKWGLDNYLEVKQVTTFDQRERWGWY 489 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10930.831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10930.831.1 >prot_Ecto-sp13_S_contig10930.831.1 ID=prot_Ecto-sp13_S_contig10930.831.1|Name=mRNA_Ecto-sp13_S_contig10930.831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=285bp MAAAAKAGPTDVHLELGGKSAMIVFDDVEEVEAAVDWACVGIFSNSGQVCback to top mRNA from alignment at Ecto-sp13_S_contig10930:87..2799+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10930.831.1 ID=mRNA_Ecto-sp13_S_contig10930.831.1|Name=mRNA_Ecto-sp13_S_contig10930.831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2713bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10930:87..2799+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10930:87..2799+ >mRNA_Ecto-sp13_S_contig10930.831.1 ID=mRNA_Ecto-sp13_S_contig10930.831.1|Name=mRNA_Ecto-sp13_S_contig10930.831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=855bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10930:87..2799+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |