mRNA_Ecto-sp13_S_contig10918.818.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: D8LIL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL1_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.530e-57 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 1
Query: 7 SADPPPQDKENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLEDAGSA 294
SADPPPQDKENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLE+AGSA
Sbjct: 9 SADPPPQDKENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLENAGSA 104
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: A0A6H5JQH7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH7_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.110e-37 Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 1
Query: 70 KSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLED 282
KSPNIQYEAFHVFKVFVANPKKP EVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLED
Sbjct: 254 KSPNIQYEAFHVFKVFVANPKKPPEVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLED 324
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: A0A836CD73_9STRA (Mo25-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD73_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.620e-33 Identity = 61/82 (74.39%), Postives = 73/82 (89.02%), Query Frame = 1
Query: 28 DKENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQ 273
+++NLK MM LLRDKSPNIQYEAFHVFKVFVANPKKP E+T+ILV N+AKLI YLENFHND+DD QF++EK LL++TL L+
Sbjct: 240 NRDNLKKMMMLLRDKSPNIQYEAFHVFKVFVANPKKPPEITRILVANRAKLITYLENFHNDKDDEQFRDEKALLITTLEALE 321
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: A0A3L6V1E9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A3L6V1E9_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.210e-32 Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 31 KENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQL 276
++NLKMMMNLLRD S NIQ+EAFHVFKVFVANPKKP EVT+IL+NNK KLIAYLE F ND+DD+QF EEK LL+ TL L+L
Sbjct: 224 RDNLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPNEVTQILLNNKDKLIAYLEKFQNDKDDSQFVEEKALLIRTLGTLEL 305
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: G4YX18_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YX18_PHYSP) HSP 1 Score: 122 bits (305), Expect = 5.870e-32 Identity = 60/88 (68.18%), Postives = 73/88 (82.95%), Query Frame = 1
Query: 28 DKENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLEDAGS 291
+KENLKMMMNLLRD S NIQ+EAFHVFKVFVANPKKP +++ILVNN+ KLIAYL+NF N ++D QF EEK LL+ TL L++ +A S
Sbjct: 108 EKENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPEAISQILVNNREKLIAYLKNFQNSKEDPQFIEEKALLIRTLEGLKVGEAAS 195
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: A0A485KMR1_9STRA (Aste57867_9258 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMR1_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.300e-31 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = 1
Query: 31 KENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQL---EDAGSA 294
++NLKMMMNLLRD S NIQ+EAFHVFKVFVANPKKP E+T+IL+NNK KLIAYLE F N++++ QF EEK LL+ TLS L+L EDA +A
Sbjct: 249 RDNLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPNEITQILLNNKDKLIAYLEKFQNEKEEEQFVEEKALLIRTLSTLELRTDEDAATA 339
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: A0A7S2V3C4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3C4_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.820e-31 Identity = 59/88 (67.05%), Postives = 74/88 (84.09%), Query Frame = 1
Query: 31 KENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQLEDAGSA 294
+ENLK++MNLLRD S NIQ+EAFHVFKVFVANPKKP E+ +ILV NK KL+AYLENFH +R+D QF EEK+LL++TL+ L++ A A
Sbjct: 275 RENLKVIMNLLRDTSANIQFEAFHVFKVFVANPKKPPEIVRILVTNKTKLVAYLENFHTEREDNQFAEEKQLLITTLASLEMPPASEA 362
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: A0A067CHG8_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHG8_SAPPC) HSP 1 Score: 123 bits (308), Expect = 5.110e-31 Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 31 KENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQL 276
+ENLKMMMNLLRD S NIQ+EAFHVFKVFVANPKKP E+T+IL+ NK KLIAYLE F N+++D QF EEK LL+ TLS L+L
Sbjct: 249 RENLKMMMNLLRDTSVNIQFEAFHVFKVFVANPKKPNEITQILLTNKEKLIAYLEKFQNEKEDEQFVEEKSLLIRTLSTLEL 330
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: A0A3R7WMM2_9STRA (VWFA domain-containing protein n=15 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WMM2_9STRA) HSP 1 Score: 126 bits (317), Expect = 7.510e-31 Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 31 KENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQL 276
++NLKMMMNLLRD S NIQ+EAFHVFKVFVANPKKP EVT+IL+NNK KLIAYLE F ND+DD+QF EEK LL+ TL L+L
Sbjct: 230 RDNLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPNEVTQILLNNKDKLIAYLEKFQNDKDDSQFVEEKALLIRTLGTLEL 311
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Match: A0A1W0A6Q8_9STRA (Calcium-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6Q8_9STRA) HSP 1 Score: 122 bits (307), Expect = 8.870e-31 Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 31 KENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTKILVNNKAKLIAYLENFHNDRDDAQFKEEKKLLVSTLSLLQL 276
+ENLKMMMNLLRD S NIQ+EAFHVFKVFVANPKKP E+T+IL+ NK KLIAYLE F N+++D QF EEK LL+ TLS L+L
Sbjct: 249 RENLKMMMNLLRDPSVNIQFEAFHVFKVFVANPKKPNEITQILLTNKDKLIAYLEKFQNEKEDEQFVEEKNLLIRTLSTLEL 330 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10918.818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10918.818.1 >prot_Ecto-sp13_S_contig10918.818.1 ID=prot_Ecto-sp13_S_contig10918.818.1|Name=mRNA_Ecto-sp13_S_contig10918.818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp PPSADPPPQDKENLKMMMNLLRDKSPNIQYEAFHVFKVFVANPKKPREVTback to top mRNA from alignment at Ecto-sp13_S_contig10918:4249..5638+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10918.818.1 ID=mRNA_Ecto-sp13_S_contig10918.818.1|Name=mRNA_Ecto-sp13_S_contig10918.818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1390bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10918:4249..5638+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10918:4249..5638+ >mRNA_Ecto-sp13_S_contig10918.818.1 ID=mRNA_Ecto-sp13_S_contig10918.818.1|Name=mRNA_Ecto-sp13_S_contig10918.818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10918:4249..5638+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |