mRNA_Ecto-sp13_S_contig10903.805.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A6H5JP28_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP28_9PHAE) HSP 1 Score: 308 bits (788), Expect = 7.720e-104 Identity = 196/202 (97.03%), Postives = 197/202 (97.52%), Query Frame = 1
Query: 1 MVDYSRFDHIGSDSDDDGAAVGSSKPTAMRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSRASVPQPKMMTASKKGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMTL 606
MVDYSRFDHIGSDSDDDGAAVGSSKPTAMRP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGSRASVPQPKMMTASKKGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADR+EC ITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMTL
Sbjct: 1 MVDYSRFDHIGSDSDDDGAAVGSSKPTAMRP--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGSRASVPQPKMMTASKKGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRIECTITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMTL 200
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A835YMR3_9STRA (Nuclear movement domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR3_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.230e-46 Identity = 108/202 (53.47%), Postives = 130/202 (64.36%), Query Frame = 1
Query: 1 MVDYSRFDHIGSDSDDDGAAVGSSKPTAMRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GGSRASVPQPKMMTASKKGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMT 603
MVDYSRFD I SD++G A + P A+ XXXXXXXXX XXXXXXXXXX GS V + + AS KG+EGRI F+H+GR +YEWEQSLEEVN+Y++ PPGV + ++C I H+ +G+KGNPPFIDEDT GPV V ESYWMM+GGELN+NLQK K TW AL G DP+T
Sbjct: 1 MVDYSRFDKIDVSSDEEGDA--DAAPAALASXXXXXXXXXXASQQDTEPYLQPQQHAQQLTGSXXXXXXXXXXXAGSGTGVQK---IQASTKGREGRISFQHDGREIYEWEQSLEEVNIYVKPPPGVASSAIQCSIGHTHLSVGIKGNPPFIDEDTWGPVKVSESYWMMEGGELNLNLQKAVKGSTWGGALAGSGQAADPLT 197
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: F0XX75_AURAN (CS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX75_AURAN) HSP 1 Score: 143 bits (361), Expect = 4.570e-40 Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 271 KGKE-GRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMT 603
KG E GR +F+HEGR +YEW+QSLE+VN+YI PPGV D ++C I+P H+ LGL+GNPPF+DE TGGPVVV+ES+W M+ GEL V KM+K +TW AL R +VDP T
Sbjct: 16 KGSEKGRYQFKHEGRVIYEWDQSLEDVNIYITPPPGVVPDMIDCTISPNHLRLGLRGNPPFLDEATGGPVVVKESHWYMNDGELTVLFAKMRKGETWDGALATRG-KVDPFT 126
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A8J2WTL1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTL1_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.720e-39 Identity = 65/112 (58.04%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 271 KGKE-GRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMT 603
KG E GR +F+HEGR +YEW+QSLE+VN+Y++ PPGV D ++CK+TP H+ LGL+GNPPF+DE TGGP+V +ES++ M GE+ V + KM+K +TW AL GR QVDP T
Sbjct: 84 KGSEVGRYQFKHEGRLIYEWDQSLEDVNIYVKPPPGVTPDMIDCKLTPSHLRLGLRGNPPFLDEPTGGPIVAKESHFYMVDGEITVAMSKMRKGETWGTALGGRG-QVDPFT 194
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A7S2WQ23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQ23_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.460e-39 Identity = 62/106 (58.49%), Postives = 85/106 (80.19%), Query Frame = 1
Query: 283 GRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPM 600
GR F+HEGRT+YEW+QSLEEVN++I PPGV + ++ I+ H+ +G+KGNPPF+DEDTGG +VV+ES+W GE+N+NLQKM+KA WP+ALQG+ Q+DP+
Sbjct: 82 GRHAFQHEGRTIYEWDQSLEEVNVWIRPPPGVTSQHLDINISYGHVRVGIKGNPPFLDEDTGGEIVVKESFWSFQDGEINLNLQKMRKAAMWPSALQGQG-QLDPL 186
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A7S4EBP3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBP3_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.780e-39 Identity = 65/112 (58.04%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 271 KGKE-GRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMT 603
KG E GR +F+HEGR +YEW+QSLE+VN+Y++ PPGV D ++CK+TP H+ LGL+GNPPF+DE TGGP+V +ES++ M GE+ V + KM+K +TW AL GR QVDP T
Sbjct: 140 KGSEVGRYQFKHEGRLIYEWDQSLEDVNIYVKPPPGVTPDMIDCKLTPSHLRLGLRGNPPFLDEPTGGPIVAKESHFYMVDGEITVAMSKMRKGETWGTALGGRG-QVDPFT 250
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A7R9UC51_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC51_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.950e-36 Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 271 KGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRN-TQVDPMT 603
+G +GRIKFE +GRT+YEWEQ+L++V++Y+ P GV+A + C+I PR + LGL GNPPF+DE+TGG V +ESYWMM GEL + LQK K +TW AAL+G+ Q+D T
Sbjct: 40 RGTDGRIKFEFDGRTIYEWEQTLDDVSIYVVPPEGVQAKHISCEIQPRRLQLGLAGNPPFLDEETGGLVKADESYWMMADGELVITLQKGFKGETWDAALKGQGGEQIDVAT 151
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A482T3Y8_9ARCH (CS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3Y8_9ARCH) HSP 1 Score: 134 bits (336), Expect = 4.780e-36 Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 1
Query: 265 SKKGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGR-NTQVDPMT 603
+KKGKEGR+KFEHEGRT+YEWEQ+L EV +YI+ PPGV ++ I+P H+ +G+KG P+IDEDTGG V ES W+++ GE+ + LQK KA+ W AL+GR +++D T
Sbjct: 55 TKKGKEGRLKFEHEGRTIYEWEQNLTEVLIYIDMPPGVTRKMLDILISPSHLRVGVKGTSPYIDEDTGGLVKTSESTWLIEEGEIQITLQKSLKAEAWDCALKGRAGSEIDAFT 168
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A2R5GR63_9STRA (NudC domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GR63_9STRA) HSP 1 Score: 132 bits (331), Expect = 9.530e-36 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 1
Query: 274 GKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPM 600
G+ R +FEH+GR VYEWEQ+L+EV +Y+ P GV A +ECKI+ H+ LG+KGNPPFIDED G ES W MD GEL +NL+KM+KA TW +AL+G +DP+
Sbjct: 2 GESKRHRFEHDGRLVYEWEQNLDEVLIYVRPPEGVTAKMIECKISKNHLTLGIKGNPPFIDEDLGDSCEAGESMWTMDDGELEINLKKMRKASTWESALKGHGA-LDPV 109
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Match: A0A4D9DCE6_9STRA (CS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCE6_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.320e-35 Identity = 63/112 (56.25%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 271 KGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRVECKITPRHICLGLK-GNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMT 603
KGKEGR+KFE++GRT+YEWEQ+LE+V++Y+ P GVKA + C I H+ LGLK PFIDE TGG V ES+W ++ GEL+V LQK KK + WP+AL GR + +DP+T
Sbjct: 60 KGKEGRLKFEYDGRTIYEWEQTLEDVSIYVTPPSGVKASMLRCTIASSHLTLGLKEAGHPFIDEATGGSVKAAESFWTLEDGELHVLLQKAKKGEVWPSALAGRGS-LDPVT 170 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10903.805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10903.805.1 >prot_Ecto-sp13_S_contig10903.805.1 ID=prot_Ecto-sp13_S_contig10903.805.1|Name=mRNA_Ecto-sp13_S_contig10903.805.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp MVDYSRFDHIGSDSDDDGAAVGSSKPTAMRPGAAAQQEAVRASGSSSLPSback to top mRNA from alignment at Ecto-sp13_S_contig10903:3..2044- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10903.805.1 ID=mRNA_Ecto-sp13_S_contig10903.805.1|Name=mRNA_Ecto-sp13_S_contig10903.805.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2042bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10903:3..2044- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10903:3..2044- >mRNA_Ecto-sp13_S_contig10903.805.1 ID=mRNA_Ecto-sp13_S_contig10903.805.1|Name=mRNA_Ecto-sp13_S_contig10903.805.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10903:3..2044- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |