mRNA_Ecto-sp13_S_contig109.799.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig109.799.1
Unique NamemRNA_Ecto-sp13_S_contig109.799.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI)

HSP 1 Score: 847 bits (2189), Expect = 1.020e-304
Identity = 522/580 (90.00%), Postives = 528/580 (91.03%), Query Frame = 1 
Query:   40 QEQRFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHGLNDGVGGGVGDGGNASKAGVRGGRKSTDSNRSSVGSSSKQINAAAAAGNRGHERSSSLGQSGMAPAXXXXXXXXXXXXXXXXXXXXXGHIRTESGSALMGRREDCMAVEKGVWDAGGHGHGRLPSLDLVTGGLRNLHGSGGXXXXXXXSGGQGVGTEMPPTLGRLVPSAENVVSRESSPMKPGAGXXXXXXXXXXXXXNRMHAGSSDYQHTGNRLGGGGHHPTYGRSQDDLNLTPRSHFAGPIMGLGLHQGVAGNWAAGGVHGGXXXXXXG----YSNSLTPNQEFFGSNGSRNSNPYQGSSPRVLQNMHSRDDLDVLRPRKTRRTGPSFDQESHADNQDPSQAFLAMSPRATGAGGDGGGGFMDERGGYLNTSAVYASPDELPPAAPRRLVSRHNTPSRPERSSAXXXXXXXXXXXXXXXXXXXXXXXXXXEPSSMDXXXXXXXXXXXXXALTSQGFQ 1767
            QEQRFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHGLNDGVGGGVGDGGN  KAG RGGRKSTDSNRSSVGSSSKQ+NA+             LGQSGMA  XXXXXXXXXXXXXXXXXXXXXGHIRTESGSALMGRREDCMAVEKGVWDAGGHGHGRLPSLDLVTGGLRNLHGSGGXXXXXXX     VGTEMPPTLGRLVPSAENVVSRESSPMKPGAG             NRMHAGSSDYQHTGNRL GGGHHPTYGRSQDDLNLTPRSHFAGPIMGLGLHQGVAGNWAAGGVHG XXXXXX     Y+NSLTPNQEFFGSNGSRNSNPYQGSSPRVLQNMHSRDDLDVLRPRKTRRTGPSFDQESHA+NQDPSQAFLAMSPRA G GGDGGGGF++ERGGYLNTSAVYASPDELPPAAPRRLVSRHNTPSRPERS  XXXXXXXXXXXXXXXXXXXXXXX   EPSSMD  XXXXXXXXXXXALTSQGFQ
Sbjct:   39 QEQRFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHGLNDGVGGGVGDGGNVPKAGARGGRKSTDSNRSSVGSSSKQVNASXXXXXXXXXXXXXLGQSGMAXXXXXXXXXXXXXXXXXXXXXXXGHIRTESGSALMGRREDCMAVEKGVWDAGGHGHGRLPSLDLVTGGLRNLHGSGGXXXXXXXXX-XXVGTEMPPTLGRLVPSAENVVSRESSPMKPGAGGGGG---------NRMHAGSSDYQHTGNRLDGGGHHPTYGRSQDDLNLTPRSHFAGPIMGLGLHQGVAGNWAAGGVHGXXXXXXXXXXXXYANSLTPNQEFFGSNGSRNSNPYQGSSPRVLQNMHSRDDLDVLRPRKTRRTGPSFDQESHANNQDPSQAFLAMSPRAAGTGGDGGGGFIEERGGYLNTSAVYASPDELPPAAPRRLVSRHNTPSRPERSXXXXXXXXXXXXXXXXXXXXXXXXXSL-EPSSMDTDXXXXXXXXXXXALTSQGFQ 607
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A6H5JLW3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE)

HSP 1 Score: 861 bits (2224), Expect = 1.060e-300
Identity = 531/599 (88.65%), Postives = 535/599 (89.32%), Query Frame = 1 
Query:    1 PAAGGAAQPTLQQQEQRFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPE------IPPEFAHDVHGHGLNDGVGGGVGDGGNASKAGVRGGRKSTDSNRSSVGSSSKQINAAAAAGNRGHERSSSLGQSGMAPAXXXXXXXXXXXXXXXXXXXXXGHIRTESGSALMGRREDCMAVEKGVWDAGGHGHGRLPSLDLVTGGLRNLHGSGGXXXXXXXSGGQGVGTEMPPTLGRLVPSAENVVSRESSPMKPGAGXXXXXXXXXXXXX-NRMHAGSSDYQHTGNRLGGGGHHPTYGRSQDDLNLTPRSHFAGPIMGLGLHQGVAGNWAAGGVHGGXXXXXXGYSNSLTPNQEFFGSNGSRNSNPYQGSSPRVLQNMHSRDDLDVLRPRKTRRTGPSFDQESHADNQDPS---QAFLAMSPRATGAGGDGGGGFMDERGGYLNTSAVYASPDELPPAAPRRLVSRHNTPSRPERSSAXXXXXXXXXXXXXXXXXXXXXXXXXXEPSSMDXXXXXXXXXXXXXALTSQGFQ 1767
            PAAGGAAQPTLQQQEQRFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPE      IPPEFAHDVHGHGLNDGVGGGVGDGGNA KAGVRGGRKSTDSNR SVGSSSKQINAA            SLGQSGM   XXXXXXXXXXXXXXXXXXXXXGHIRTESGSALMGRRED MAVEKGVWDAGGHGHGRLPSL+LVTGGLRNLHGSG         GGQGVGTEMPPTLGRLVPSAENVVSRE SPMKPGAGXXXXXXXXXXXXX NRMHAGSSDYQHTG RL GGGHHPTYGRSQDDLNLTPRSHFAGPIMGLGLHQGVAGNWAAGGVHGG      GYSNSLTPNQEFFGSNGSRNSNPYQGSSPRVLQ MHSRDDLDVLRPRKTRRTGPSFDQESHA NQDPS   +AFLAMSPRATG GGDGGGGFMDERGGYLNTSAVYASPDELPPAAPRRLVSRH+TPSRPERSSA    XXXXXXXXXXXXXXXX      +PSSMD    XXXXXXXX ALTSQGFQ
Sbjct:    3 PAAGGAAQPTLQQQEQRFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEEEAFPQIPPEFAHDVHGHGLNDGVGGGVGDGGNAPKAGVRGGRKSTDSNRFSVGSSSKQINAAGXXXXXXXXXXXSLGQSGMXXXXXXXXXXXXXXXXXXXXXXXXGHIRTESGSALMGRREDRMAVEKGVWDAGGHGHGRLPSLNLVTGGLRNLHGSGNGGRTGN-GGGQGVGTEMPPTLGRLVPSAENVVSREPSPMKPGAGXXXXXXXXXXXXXXNRMHAGSSDYQHTGPRLDGGGHHPTYGRSQDDLNLTPRSHFAGPIMGLGLHQGVAGNWAAGGVHGGGPG---GYSNSLTPNQEFFGSNGSRNSNPYQGSSPRVLQTMHSRDDLDVLRPRKTRRTGPSFDQESHAYNQDPSPTTKAFLAMSPRATGTGGDGGGGFMDERGGYLNTSAVYASPDELPPAAPRRLVSRHSTPSRPERSSASKNKXXXXXXXXXXXXXXXXHLMSL-DPSSMDTDGTXXXXXXXX-ALTSQGFQ 595
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A835Z533_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z533_9STRA)

HSP 1 Score: 126 bits (316), Expect = 6.410e-31
Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 1 
Query:   91 LFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 402
            L+ IL+ E P+VI W+++G+AF I D  +F  +++P  FK +K+SSFQRQLNLYGFRK+VRG EAGGYMH  F+RG+ + L  VRRG  P  PP++   ++G G
Sbjct:    6 LYNILEVEAPEVITWTSTGRAFGIQDMPRFRTQVLPTHFKHDKFSSFQRQLNLYGFRKIVRGKEAGGYMHKDFQRGRADLLPHVRRGHMPPCPPQYERKIYGSG 109
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A835Z0U6_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U6_9STRA)

HSP 1 Score: 126 bits (316), Expect = 6.410e-31
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 1 
Query:   91 LFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHG 396
            L  IL+ E   +IGWS SG++F I +   F  +I+P++FK +K+SSFQRQLNLYGFRK+V+GNE+G Y+H  F RG PE L QVRRG  P  PP + H V+G
Sbjct:    8 LASILENESADIIGWSQSGRSFGIREMNAFKDQILPQYFKHDKFSSFQRQLNLYGFRKIVKGNESGCYIHTYFRRGHPELLKQVRRGQMPPCPPRYEHKVYG 109
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A6H5L4Y2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y2_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 7.990e-28
Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 1 
Query:   67 SGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 402
            SG  F   L  +LK E   ++ W+++G AF I D+  F ++++  +FK NK+SSFQRQLNLYGFRK+V+G E+G YMHP+F R +P+ LS+VRRG  P  PPE+   V+G G
Sbjct:    3 SGNGFPYILHDLLKNEASAIVTWTSTGTAFGILDNAAFGQDVLSSYFKHNKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYGSG 114
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A835YPY0_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 9.140e-28
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 1 
Query:  112 EDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHG 402
            E P VI W++SG+AF I D   F   I+P+ FK +K+SSFQRQLNLYGFRK+VRG E+GGYMH  F+RG+ + L  V+RG+ P  PPE+   ++G G
Sbjct:    2 EAPDVIKWTSSGQAFGIQDMATFRTVILPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYGSG 98
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A835YN41_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN41_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.810e-27
Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 1 
Query:   79 FALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHG 396
            F   L  IL+ E P++I WS++G+AF I +   F  +I+P++FK +K+SSFQRQLNLYGFRK+V+G E+G Y+H  F+RG PE L QVRRG  P  PP +   V+G
Sbjct:   24 FPYVLISILENESPEIITWSSTGRAFGIRNMAAFKTKILPQYFKHDKFSSFQRQLNLYGFRKIVKGRESGCYIHCYFQRGHPELLKQVRRGQVPPCPPRYERKVYG 129
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A6H5JIP5_9PHAE (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIP5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 9.100e-27
Identity = 56/132 (42.42%), Postives = 90/132 (68.18%), Query Frame = 1 
Query:    4 AAGGAAQPTLQQQEQRFGKRGS-GQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHG 396
            +AG ++   L +  QR G R + G+ FA+  + IL  E   +I W+ SG+AF++ D  +F +EI+ ++F+ NK+SSF+RQLNLYG+RK+++G +AG YMHP F+RG+PE L +V++G  P       +++HG
Sbjct:   27 SAGASSVGHLPRSMQRPGPRTTAGRGFAVKFYDILSQESSDIITWTKSGQAFQVVDYTRFSEEILLKYFRHNKFSSFRRQLNLYGYRKVIKGPDAGAYMHPFFQRGRPELLGEVKKGKVPHYEMHGVNEIHG 158
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA)

HSP 1 Score: 122 bits (306), Expect = 5.220e-26
Identity = 55/100 (55.00%), Postives = 73/100 (73.00%), Query Frame = 1 
Query:   49 RFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRR 348
            RFGKRG+ QAFA  LF++L  E P ++ W+ SG AFRI D EKF  E + ++FK N  +SFQRQLNLYGFRK ++G ++GG+ H  F+R +PE L +VRR
Sbjct:   19 RFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRR 118
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BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 120 bits (302), Expect = 6.090e-26
Identity = 57/120 (47.50%), Postives = 82/120 (68.33%), Query Frame = 1 
Query:   49 RFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHGLN 408
            R G+RG+ QAFA  L++IL+ E   ++ W+A+G AF + D ++F KEI+ ++F+ +K++SFQRQLNLYGFRK+ RG++AG Y H  F +GKP+ LS VRR      P    H  HG  L+
Sbjct:    5 RTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSSSPSP-PHPAHGFALH 123
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig109.799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU68_ECTSI1.020e-30490.00Heat Shock transcription factor (Partial) (Fragmen... [more]
A0A6H5JLW3_9PHAE1.060e-30088.65HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A835Z533_9STRA6.410e-3152.88HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A835Z0U6_9STRA6.410e-3154.90HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A6H5L4Y2_9PHAE7.990e-2850.00HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A835YPY0_9STRA9.140e-2854.64HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A835YN41_9STRA1.810e-2751.89HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A6H5JIP5_9PHAE9.100e-2742.42HSF_DOMAIN domain-containing protein (Fragment) n=... [more]
A0A835YGA3_9STRA5.220e-2655.00HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A6V1QFS1_HETAK6.090e-2647.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig109contigEcto-sp13_S_contig109:2047..5888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score96.7
Seed ortholog evalue3.9e-17
Seed eggNOG ortholog2880.D8LLB2
Model size1768
KEGG koko:K09414,ko:K09419
KEGG Pathwayko04212,ko05134,map04212,map05134
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG5169@1,KOG0627@2759
Ec32 ortholog descriptionHeat Shock transcription factor
Ec32 orthologEc-16_000430.1
Cds size1767
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462561.7056339-CDS-Ecto-sp13_S_contig109:2046..22571681462561.7056339-CDS-Ecto-sp13_S_contig109:2046..2257Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig109 2047..2257 +
1681462561.7247522-CDS-Ecto-sp13_S_contig109:3117..32691681462561.7247522-CDS-Ecto-sp13_S_contig109:3117..3269Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig109 3118..3269 +
1681462561.735774-CDS-Ecto-sp13_S_contig109:4084..45941681462561.735774-CDS-Ecto-sp13_S_contig109:4084..4594Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig109 4085..4594 +
1681462561.7454238-CDS-Ecto-sp13_S_contig109:4994..58881681462561.7454238-CDS-Ecto-sp13_S_contig109:4994..5888Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig109 4995..5888 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig109.799.1prot_Ecto-sp13_S_contig109.799.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig109 2047..5888 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig109.799.1

>prot_Ecto-sp13_S_contig109.799.1 ID=prot_Ecto-sp13_S_contig109.799.1|Name=mRNA_Ecto-sp13_S_contig109.799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=589bp
PAAGGAAQPTLQQQEQRFGKRGSGQAFALGLFQILKTEDPKVIGWSASGK
AFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMH
PLFERGKPEQLSQVRRGFFPEIPPEFAHDVHGHGLNDGVGGGVGDGGNAS
KAGVRGGRKSTDSNRSSVGSSSKQINAAAAAGNRGHERSSSLGQSGMAPA
AAAAAAAVTAAATAAAGGRGGGHIRTESGSALMGRREDCMAVEKGVWDAG
GHGHGRLPSLDLVTGGLRNLHGSGGGGGRNGNSGGQGVGTEMPPTLGRLV
PSAENVVSRESSPMKPGAGGGSGGGGGGGGGGNRMHAGSSDYQHTGNRLG
GGGHHPTYGRSQDDLNLTPRSHFAGPIMGLGLHQGVAGNWAAGGVHGGGP
GGGGGYSNSLTPNQEFFGSNGSRNSNPYQGSSPRVLQNMHSRDDLDVLRP
RKTRRTGPSFDQESHADNQDPSQAFLAMSPRATGAGGDGGGGFMDERGGY
LNTSAVYASPDELPPAAPRRLVSRHNTPSRPERSSASKNKGGGDGDDAGK
RGGQQQQHLMSLEPSSMDTDGTAGGGGGGGAALTSQGFQ
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mRNA from alignment at Ecto-sp13_S_contig109:2047..5888+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig109.799.1 ID=mRNA_Ecto-sp13_S_contig109.799.1|Name=mRNA_Ecto-sp13_S_contig109.799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3842bp|location=Sequence derived from alignment at Ecto-sp13_S_contig109:2047..5888+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCTGCCGCCGGAGGAGCAGCGCAGCCTACCCTGCAGCAACAAGAGCAGCG
GTTCGGCAAGCGCGGGTCCGGACAGGCGTTCGCCCTCGGGCTTTTCCAGA
TCCTCAAGACGGAGGATCCGAAGGTCATCGGGTGGTCCGCGTCCGGAAAG
GCGTTTCGCATCGGGGACTCGGAGAAGTTCTGCAAGGAAATCATGCCGAG
GTTTTTCAAACGTGAGAAATAGGCGCTGTCTGTGTGTATTGTACCGCTGA
ACCAGCAAGACCAAAATGTCGAGAGGGTATGCTCAGTACACTTTTCAAAC
CCGATAATAAGCACTGGCCTGTCCGCATGTTCTGTACTATACTTACCGCT
GAACCGCACAACCATTTCAATCAGAATATGAGGAGATTTCGGCTATTGTA
GGCTTTTCAACCCCGAGATCAGCGCTGTCCACATTTACCGCAAGCACACG
AGAATGCCTTACCCCTCGTGCGGCATTTGGTTGTCTTGGAGGGGATGAAC
CTCTTGGTTTCGGTTGGTCGTCTAGACGTCATCTGTTGCCTGGCGTCTGT
CTTGTGGTGTGTCACTGCTACTGCTCAAGGAGGACAGAAAGCTTACACGA
ACGATGCATACCATGCGTGCATGCCAGGGCGTTTTCTAAATGGGTTGTCC
AGAGGATAAGTAGCAGTTTCGGTTTAGGTCTTATACACGAGGGCAAGATG
AGGAGTAGTTATGTTTGAGCCCACGGAAGGGAGGAGTTCCGTATGGCACG
ACTGCCACACGTAAAGACTAAGACTCCACCCCATACCTTTCAACAGCTGT
GGTTCTATACTTGATCTAGCAGGTAGTCTTAATTTCAGTGATTTGCGTAT
TTTTTCTTTATAGAAGTACAAAGCTTTAGAACAGAGAAGCCTAGACCGGG
GTACAGCAGTAGTACTCACTTCCGTTTCTCGACTCCTTGACCAAACCAAA
CGAGTCGCTCTCCCCGTATCTCTGACATGCAATGCACTGCTGTACCGAAC
CTCCTTGCTGCTCGGGCATGGTGCATCCGTCGTCCGTGGTCGACTCGACT
CGACCGATCGCCCTCTCGCAGAGAACAAGTACTCGAGCTTCCAACGCCAG
CTGAACCTGTACGGGTTTCGTAAGCTGGTGAGAGGGAACGAGGCGGGGGG
ATACATGCACCCCCTTTTCGAGCGGGGCAAGCCGGAGCAGCTGAGCCAGG
TCCGCAGAGGCTTCTTTCCAGAGGTGAGTTGTCCACGAAGGGATGGAGGA
ATTACGAAACGAAAGAAAGGCAGCAAAATAGCTGTGAGCCTCAAGACCGT
AGTGTGTAGGTGTGTCGTGTTATGTAGGTTGCGAAGGCGTGCATGGCTGA
AGGCAAGGTGGCTTTGAGCGTCAGGACGTTTGTGCGTGTCTTGTTAGAGT
GCGGACGTGCCTCTATAGGAGGAGGCCTTCCCTCAGTTACGGAGAGAAAA
AAGATTTGAGCCTCGCTCATTAAGACCATATTATATGTGTTCATTATAAC
AGAGCTGAAAGGTAGGCAGCTTTGTATTGCATACTTGAAGACATGTTTGT
TGGCAAATGTAAGCGAGGCAACTCTGTGCCTCAAGACCTCTGTGGGAGTT
GGTGCATCATTTTCGAACGCGCTCACCCGTGCACACGTGCGTGCAGTTGT
GCATACACGTATGTAGCACCGCCGTGTGTTGCCACCCCCGGGGTGCCGGC
GTGGCGTGAGTAGCTACAGCTGCAAGTCCGGTTGGTTGATTTCACGATGA
GCACTTCCACATGACCCTTTTTCTACAGCTCCTTTTTGCCTCAAACGTGT
CGTGTAAGTTGGTGCGCTTCTGCCGTGTATCCGAGCGTAGAACATGCTGT
CAATCCATGGCGATTTTCAACCTTGCCGTCATGTGTCCACGTCCACACTA
GGCGAGAATAGGCCTCCCTCCTCCCCGCTGCTGCAGGCAAAGACGCATCC
CCGCCTTGACCTCTGACTCGATTCACCCACTCCACCCCCCTCTCGACCGC
GTTGGCGTACTTCTGATCGTTCGTATACGTACCTTCAGATCCCTCCCGAG
TTCGCGCACGACGTTCACGGGCACGGCCTCAATGATGGGGTGGGTGGCGG
GGTCGGAGACGGCGGCAACGCGTCGAAAGCGGGGGTACGAGGCGGTCGCA
AGTCCACCGACTCGAACAGGTCCAGCGTTGGCAGCAGCTCTAAGCAAATC
AACGCCGCCGCCGCCGCCGGCAACAGGGGACACGAGCGCTCGTCGAGCCT
CGGGCAGTCGGGAATGGCGCCTGCGGCTGCGGCTGCCGCCGCCGCCGTTA
CCGCTGCCGCCACCGCCGCCGCTGGCGGGCGCGGGGGCGGGCACATCCGG
ACCGAGAGCGGGTCGGCGCTGATGGGCCGGAGGGAGGACTGCATGGCCGT
CGAGAAGGGGGTGTGGGATGCGGGGGGGCACGGGCACGGGCGCCTGCCTT
CCCTCGACTTGGTGACGGGGGGGCTCAGGAATTTGCACGGCAGTGGCGGC
GGCGGCGGGAGGAATGGGAATAGCGGGGGGCAGGGAGTCGGGACGGAGGT
GGGTGGGATGAGAGAGGACAAGCCCAGCCGCCGTTTTTGGTCTCTGTTGC
GACTCCGGGGCCTGTAGAAGGGGTGCTTGCTTCGACAACGGTTCGTTTGT
GGTGTTTACAACCAGGCGGGCAGGCAAGCGTGGCGAAGAGAATGTTTATT
TTTGCCGCAGGCATCATGACATCATTCTTGTGTGTTTCGGTCGCGGAGAA
AGCATCTATGCACCGACGCGACGTCTTCAAAGGCCGTCAGTCTTTTGTTT
TTCTCCGTCCCGTAGTTGTTATGTCGTGCCTTATCCGCTCTCCCTCGCGC
TAGCGCTCGCATGACCGTTTGTGGCTGCAGCTGATTCGATCGGATCATTT
ATTTTCCCAACCGTACCGTATGCATACCGCTATACGTGGAAATTTCAGAT
GCCGCCGACGTTGGGGCGACTGGTACCTTCCGCCGAGAACGTCGTATCCC
GTGAGTCTTCCCCGATGAAGCCCGGCGCGGGAGGCGGCAGCGGTGGCGGC
GGCGGCGGCGGCGGCGGCGGTAACAGGATGCACGCGGGCTCGTCCGACTA
CCAGCACACCGGCAACCGACTAGGCGGCGGGGGCCACCACCCGACCTACG
GCCGCAGCCAGGATGACCTTAACCTTACTCCTCGCTCTCACTTCGCCGGG
CCTATCATGGGGCTGGGCCTGCACCAGGGGGTAGCGGGGAATTGGGCGGC
CGGCGGTGTCCACGGCGGCGGGCCCGGCGGGGGCGGGGGCTACTCGAACT
CGCTCACCCCTAACCAAGAGTTCTTCGGTAGCAACGGCAGCCGGAACAGC
AACCCGTACCAGGGGAGCAGCCCCCGGGTGCTGCAGAACATGCACTCGAG
GGACGACCTCGACGTGCTGCGGCCCCGCAAGACTCGCCGCACGGGACCCT
CGTTCGACCAGGAGAGCCACGCCGACAACCAAGACCCGTCGCAGGCGTTT
CTCGCCATGAGCCCCCGCGCGACCGGGGCCGGCGGCGACGGAGGGGGAGG
CTTTATGGATGAGCGCGGCGGGTACCTCAACACGTCGGCGGTGTACGCCT
CGCCGGACGAGTTGCCGCCGGCCGCGCCGCGCAGGCTGGTGTCTCGGCAC
AACACGCCGTCTCGGCCGGAGCGGTCGAGCGCTTCGAAGAACAAGGGGGG
CGGCGATGGAGATGACGCCGGGAAGCGGGGAGGGCAGCAGCAGCAGCACC
TCATGAGCCTCGAGCCCAGCTCCATGGACACGGATGGCACTGCCGGCGGC
GGTGGCGGCGGCGGCGCGGCTCTCACCAGCCAGGGCTTCCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig109:2047..5888+

>mRNA_Ecto-sp13_S_contig109.799.1 ID=mRNA_Ecto-sp13_S_contig109.799.1|Name=mRNA_Ecto-sp13_S_contig109.799.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1767bp|location=Sequence derived from alignment at Ecto-sp13_S_contig109:2047..5888+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCTGCCGCCGGAGGAGCAGCGCAGCCTACCCTGCAGCAACAAGAGCAGCG
GTTCGGCAAGCGCGGGTCCGGACAGGCGTTCGCCCTCGGGCTTTTCCAGA
TCCTCAAGACGGAGGATCCGAAGGTCATCGGGTGGTCCGCGTCCGGAAAG
GCGTTTCGCATCGGGGACTCGGAGAAGTTCTGCAAGGAAATCATGCCGAG
GTTTTTCAAACAGAACAAGTACTCGAGCTTCCAACGCCAGCTGAACCTGT
ACGGGTTTCGTAAGCTGGTGAGAGGGAACGAGGCGGGGGGATACATGCAC
CCCCTTTTCGAGCGGGGCAAGCCGGAGCAGCTGAGCCAGGTCCGCAGAGG
CTTCTTTCCAGAGATCCCTCCCGAGTTCGCGCACGACGTTCACGGGCACG
GCCTCAATGATGGGGTGGGTGGCGGGGTCGGAGACGGCGGCAACGCGTCG
AAAGCGGGGGTACGAGGCGGTCGCAAGTCCACCGACTCGAACAGGTCCAG
CGTTGGCAGCAGCTCTAAGCAAATCAACGCCGCCGCCGCCGCCGGCAACA
GGGGACACGAGCGCTCGTCGAGCCTCGGGCAGTCGGGAATGGCGCCTGCG
GCTGCGGCTGCCGCCGCCGCCGTTACCGCTGCCGCCACCGCCGCCGCTGG
CGGGCGCGGGGGCGGGCACATCCGGACCGAGAGCGGGTCGGCGCTGATGG
GCCGGAGGGAGGACTGCATGGCCGTCGAGAAGGGGGTGTGGGATGCGGGG
GGGCACGGGCACGGGCGCCTGCCTTCCCTCGACTTGGTGACGGGGGGGCT
CAGGAATTTGCACGGCAGTGGCGGCGGCGGCGGGAGGAATGGGAATAGCG
GGGGGCAGGGAGTCGGGACGGAGATGCCGCCGACGTTGGGGCGACTGGTA
CCTTCCGCCGAGAACGTCGTATCCCGTGAGTCTTCCCCGATGAAGCCCGG
CGCGGGAGGCGGCAGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGTAACA
GGATGCACGCGGGCTCGTCCGACTACCAGCACACCGGCAACCGACTAGGC
GGCGGGGGCCACCACCCGACCTACGGCCGCAGCCAGGATGACCTTAACCT
TACTCCTCGCTCTCACTTCGCCGGGCCTATCATGGGGCTGGGCCTGCACC
AGGGGGTAGCGGGGAATTGGGCGGCCGGCGGTGTCCACGGCGGCGGGCCC
GGCGGGGGCGGGGGCTACTCGAACTCGCTCACCCCTAACCAAGAGTTCTT
CGGTAGCAACGGCAGCCGGAACAGCAACCCGTACCAGGGGAGCAGCCCCC
GGGTGCTGCAGAACATGCACTCGAGGGACGACCTCGACGTGCTGCGGCCC
CGCAAGACTCGCCGCACGGGACCCTCGTTCGACCAGGAGAGCCACGCCGA
CAACCAAGACCCGTCGCAGGCGTTTCTCGCCATGAGCCCCCGCGCGACCG
GGGCCGGCGGCGACGGAGGGGGAGGCTTTATGGATGAGCGCGGCGGGTAC
CTCAACACGTCGGCGGTGTACGCCTCGCCGGACGAGTTGCCGCCGGCCGC
GCCGCGCAGGCTGGTGTCTCGGCACAACACGCCGTCTCGGCCGGAGCGGT
CGAGCGCTTCGAAGAACAAGGGGGGCGGCGATGGAGATGACGCCGGGAAG
CGGGGAGGGCAGCAGCAGCAGCACCTCATGAGCCTCGAGCCCAGCTCCAT
GGACACGGATGGCACTGCCGGCGGCGGTGGCGGCGGCGGCGCGGCTCTCA
CCAGCCAGGGCTTCCAG
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