mRNA_Ecto-sp13_S_contig1089.796.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: D8LLN6_ECTSI (Oxidoreductase, short chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN6_ECTSI) HSP 1 Score: 595 bits (1535), Expect = 1.430e-206 Identity = 309/342 (90.35%), Postives = 323/342 (94.44%), Query Frame = 3
Query: 234 MTRTALRSAVVVFSAFAQHSTSFVLRGSPGAAPGAFTQHPRGQHPSNAPMALGLTDRIGSTAAVGIRATSMASSSTDETAPVSPLPGNCLVIGGNRGLGLEVVRHLKERESTILATTRTTNADLEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEMYADKYDELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLGLGVYALEDPESYGPFSELPW 1259
M RTALRSAVVV AFAQ STSFVL SP AAPGAFT +PRGQHPS+ PMA GLT+RIGSTA VG RA MASSST+ET PVSPLPGNCLVIGGNRGLGLEVVRHLK+REST+LATTRTTNADLEAVGVSVLEGIDV+DK+SGTKLVEAVQKELGEGGTLDYVICN GILIPDTFEDP+FDAAVKMYEVCVLGPLRVLQALVVSGLLR+GS+IGM+TSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVK RGVAIVNIHPGFMKTSMTE+YADKYDELGAIGPEEAAPGIVKAVEDLTLE TGKFIAP+GSKSLGLGVYALEDPESYGPF ELPW
Sbjct: 1 MARTALRSAVVVVLAFAQLSTSFVLWSSPAAAPGAFTPYPRGQHPSSTPMAPGLTERIGSTAVVGARA--MASSSTNETPPVSPLPGNCLVIGGNRGLGLEVVRHLKKRESTVLATTRTTNADLEAVGVSVLEGIDVSDKDSGTKLVEAVQKELGEGGTLDYVICNAGILIPDTFEDPEFDAAVKMYEVCVLGPLRVLQALVVSGLLRKGSNIGMITSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKTRGVAIVNIHPGFMKTSMTEIYADKYDELGAIGPEEAAPGIVKAVEDLTLETTGKFIAPQGSKSLGLGVYALEDPESYGPFCELPW 340
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: A0A1X6NYS2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYS2_PORUM) HSP 1 Score: 244 bits (623), Expect = 1.750e-71 Identity = 131/262 (50.00%), Postives = 176/262 (67.18%), Query Frame = 3
Query: 483 PLPGNCLVIGGNRGLGLEVVRHLKERESTILATTRTT-NADLEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDY--VICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEMYADKYDELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLGLGVYALEDPESYGPFSELPW 1259
PL + L+IG GLGLE+ + L + + T R T + LE + S++ GIDVA + KLVE EL G ++ ++C GIL PD+ D + D +M +VC LGPLR++ ALV +GLL GS +G+VTSEGGS+GLRT EGG NYGHH SK A+NM GK+ +LD+ RG+ +V IHPGFMK+SMTE + +KYDELGA+ P AA G+V+ ++ L +NTG+FI P GS++LG GV+ LE+ E GP SELPW
Sbjct: 9 PLGDHALIIGAGSGLGLELAKVLAPTGTALAVTVRNTVDPALEELDASIIRGIDVAT-DGPDKLVE----ELAALGWVNVSTLVCVAGILKPDSLGDLQPDNWRQMMDVCALGPLRIVDALVTAGLLTAGSKVGLVTSEGGSIGLRTPKEGGGNYGHHCSKAAENMAGKILSLDLAERGMPLVCIHPGFMKSSMTEPFKEKYDELGAVEPHVAAKGVVECMKQLNKDNTGRFIQPLGSENLGFGVWGLEEAEKKGPMSELPW 265
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: A0A7S1ESF3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESF3_9RHOD) HSP 1 Score: 205 bits (521), Expect = 5.850e-56 Identity = 113/260 (43.46%), Postives = 165/260 (63.46%), Query Frame = 3
Query: 492 GNCLVIGGNRGLGLEVVRHLKERESTILATTRTT--NADLEAVGV-SVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMT-EMYADKYDELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLGLGVYALEDPESYGPFSELPW 1259
G LVIGG+RGLGLE+V+ L ++A R +A+LEAV +V+ G D N + E + L E +D V+ G +T ++ + VKM+++C + P ++L ++ + + IG +TSEGGS+GLRTE EGG NYGHHMSK + NM+GKL A D+KP G+++V IHPGF++T MT + Y+ +DELGA+ A P I++ V DL+LE+TG+F+A G+ LGLG+YA+EDP P ++LPW
Sbjct: 83 GTTLVIGGDRGLGLEMVKALTNNGCKVIAAIRKDKPSAELEAVNPHTVITGADFMSDN----VDEIICNGLTE--PVDTVMMVSGYFTTETLDEFNREEEVKMFKICAISPGQILTSMHKNKKFAPNAKIGFITSEGGSIGLRTEKEGGLNYGHHMSKASSNMLGKLLAYDLKPFGISMVMIHPGFLRTDMTADKYSHLWDELGAVTAATAVPYILQCVADLSLESTGRFVAAMGAHGLGLGIYAIEDPSKLVPGADLPW 336
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: A0A0F7SXX7_PHARH (Short chain dehydrogenase reductase family superfamily n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SXX7_PHARH) HSP 1 Score: 192 bits (488), Expect = 6.330e-52 Identity = 105/238 (44.12%), Postives = 148/238 (62.18%), Query Frame = 3
Query: 489 PGNCLVIGGNRGLGLEVVRHLKERESTILATTRTTNAD-LEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEMYADKYDELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLG 1199
P L++G NRGLGL + + L +R +T+ ATTR+ + GV V+EGIDV + +G LVE + EG LD + G+L +TF++P F A + MY++C +GP+ + AL S I ++TSEGGS+ LRTE EGG +GHH SK A NM+G L + D+KP+GV +V IHPGF+ T MT D Y + GA+ PE AAP + V+ +TL++TG+F AP G K +G
Sbjct: 38 PLKALIVGANRGLGLALTKELHKRGTTVYATTRSPAKEGTFPDGVHVIEGIDVGEPGAGKTLVEKL-----EGAKLDLTVIVAGLLKEETFKEPDFQAEMDMYKICAVGPVFITSALSKSSFASNAKLI-LLTSEGGSITLRTEKEGGGMFGHHGSKAAANMVGHLLSYDLKPKGVTVVMIHPGFLITDMTGGMKDHYKKGGAVKPEVAAPIFLDFVDTVTLKHTGQFWAPMGPKGIG 269
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: V2XTU7_MONRO (Short chain dehydrogenase reductase family superfamily n=3 Tax=Moniliophthora TaxID=221102 RepID=V2XTU7_MONRO) HSP 1 Score: 190 bits (482), Expect = 1.520e-51 Identity = 100/235 (42.55%), Postives = 147/235 (62.55%), Query Frame = 3
Query: 501 LVIGGNRGLGLEVVRHLKERESTILATTRTTNADLEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEM--YADKYDELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLG 1199
LVIG +RGLG E+ ++L + T+ AT R+T + L + GV + +D+ +++ G+K+V+ + G LD VI N G+ + F+ P F V+MY+V + P+ ++ LV + LL S + ++TSEGGS+GLRT+ EGG NYGHH SK A NM+GKL A D+K +G+ + IHPGFMKT MT+ + Y+ GA+ P EAA + V DLT + TG F AP+G +G
Sbjct: 5 LVIGASRGLGQELAKYLASKGHTVFATVRSTPSGLSS-GVETIPNVDLTEEDVGSKIVKGLS-----GQKLDLVIVNAGVFKKEDFDSPSFADEVEMYKVVAIAPVNIIHHLVKANLLNSPSKVILITSEGGSIGLRTQEEGGGNYGHHGSKAAANMVGKLLAHDLKDKGITVAMIHPGFMKTDMTKNVGFDQFYESGGAVEPAEAAQSTIDFVLDLTPDQTGTFWAPRGPAGVG 233
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: A0A1E3I5S4_9TREE (Cytoplasmic protein n=2 Tax=Cryptococcus depauperatus TaxID=5208 RepID=A0A1E3I5S4_9TREE) HSP 1 Score: 187 bits (476), Expect = 1.380e-50 Identity = 107/262 (40.84%), Postives = 162/262 (61.83%), Query Frame = 3
Query: 495 NCLVIGGNRGLGLEVVRHLKER--ESTILATTR-TTNADLEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEMYADK--YDELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLGLGVYALEDP--ESYGPFSELPW 1259
N LV+G +RGLGL +V+H + + + AT R + +AD+ GV+++E +D + ++ G K+V+ +Q G +D V+ G+L P+ E+ + V MY VC + P+ V+QAL+++ L + I +VTSE GS+ LRTE EGG +GHH SK A+NM+G L + D+K RGV+I IHPGF+KT MT+ + YD++GA+ P+EAA + V L L+ TGKF AP G+K +G L + + GP E+PW
Sbjct: 5 NVLVVGASRGLGLVLVKHYSSQLTPANVFATVRGSASADVFPEGVNIIEDVDCSREDCGKKIVDGLQ-----GAAVDIVVYVAGVLKPEKLEELSWKDEVLMYTVCSIAPVFVVQALLMASSLAPDARIALVTSEAGSITLRTESEGGGAFGHHGSKAAENMVGHLLSYDLKERGVSIAMIHPGFLKTDMTKDAGMEQFYDKMGAVTPDEAAKPFAEFVNKLNLDMTGKFWAPLGAKGIGNAEEVLGEEVLDKSGPL-EIPW 260
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: A0A8H3IKQ9_9LECA (Uncharacterized protein n=1 Tax=Heterodermia speciosa TaxID=116794 RepID=A0A8H3IKQ9_9LECA) HSP 1 Score: 186 bits (473), Expect = 3.030e-50 Identity = 96/238 (40.34%), Postives = 156/238 (65.55%), Query Frame = 3
Query: 495 NCLVIGGNRGLGLEVVR-HLKERESTILATTRTTNADLEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEMYA-DKY-DELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLG 1199
N L++G +RGLG + + + +++++ I AT+RT++ ++ +EGID+A +++G +V+ ++ G TLD VI G +TF+ P FDA V+MY++ +GP+ ++ LV +GL+ + I +V+SE GS+ LR E EGG NYGHH SK A NM GKL +LD+K +G+A+ +HPGFM+T MT+ DKY D GA+ P+EAA + + + L + +TG++ AP+G + +G
Sbjct: 2 NILIVGASRGLGASLTKFYAQDKDNHIFATSRTSSTAESPEHITYVEGIDIASEDAGPSIVKRIKPS---GKTLDVVIITAGYFATETFDKPDFDAEVQMYKISSIGPVFIVHHLVKAGLMAKDGKIVLVSSESGSITLRHESEGGGNYGHHASKAALNMAGKLLSLDLKAKGIAVGIVHPGFMRTEMTKGVGFDKYWDAGGAVTPDEAAASLKQYISKLDMGSTGEYWAPRGPRDIG 236
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: A0A507CIT0_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CIT0_9FUNG) HSP 1 Score: 185 bits (469), Expect = 9.740e-50 Identity = 111/254 (43.70%), Postives = 154/254 (60.63%), Query Frame = 3
Query: 504 VIGGNRGLGLEVVRHLKERESTILATTRTTNADLEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEMYA-DK-YDELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLGLGVYALEDPESYGPFSELPW 1259
+IG + GLGL + +H + + + TTR D++ GV + +D ++K S +L +EL YV+ G ++F++ ++ +KMY+ +GPL V + LV G LR GS + +TSE GS+GLRTE EGG YGHH SK AQNM GKL + D+KP+G++IV IHPGFMKT +T+ DK Y++ GAI PEEA ++K V +LTLENTGKFIAP G K +G + L E ELPW
Sbjct: 9 IIGASSGLGLALAKHFASKGTRVYGTTRD-GKDIQVEGVFTSK-LDTSEKRSIDELKIPEIQEL-------YVVA--GYFSKESFDEMSWEEELKMYKTGAMGPLFVTRHLVKQGSLRHGSKVIWITSEAGSIGLRTEKEGGGLYGHHASKTAQNMNGKLLSFDLKPKGISIVMIHPGFMKTGLTKSVGFDKHYEKGGAIDPEEAVEPLLKVVANLTLENTGKFIAPVGPKGVG-NAHVLGPVEKLPAPLELPW 250
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: A0A8H6G570_9LECA (Uncharacterized protein n=2 Tax=Parmeliaceae TaxID=78060 RepID=A0A8H6G570_9LECA) HSP 1 Score: 184 bits (467), Expect = 1.910e-49 Identity = 104/255 (40.78%), Postives = 155/255 (60.78%), Query Frame = 3
Query: 501 LVIGGNRGLGLEVVRHLKERESTILATTRTTNADLEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEMYA-DKY-DELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLGLGVYALEDPESYGPFSELPW 1259
+++G +RGLG E+ + +T+ AT+R+ A + + + IDVA +++G KL + K+ TLD VI G ++F P +D VKMY +GP+ ++ LV +GLL +GS I +V+SE GS+ LR E EGG NYGHH SK A NM+GKL +LD+K +GVA+ +HPGFM+T MT DK+ D+ GA+ P+EAA ++K +E +E TG++ AP+G + +G L S P +LPW
Sbjct: 5 IIVGASRGLGAELAKQYASN-NTVFATSRSDKAPESSKNIEYIANIDVAKEDAGQKLASHIGKK-----TLDTVIITAGYFATESFGSPSWDNQVKMYTTSSIGPVFIVHYLVKAGLLAKGSKIILVSSESGSITLRHESEGGGNYGHHASKSALNMVGKLLSLDLKEKGVAVGIVHPGFMRTEMTRGVGFDKFWDDGGAVTPDEAAKSLIKFIETFDIEKTGEYWAPRGPRDIGTAEAVLGKDLST-PL-QLPW 251
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Match: A0A067N344_PLEOS (Uncharacterized protein n=1 Tax=Pleurotus ostreatus PC15 TaxID=1137138 RepID=A0A067N344_PLEOS) HSP 1 Score: 181 bits (458), Expect = 3.440e-48 Identity = 94/235 (40.00%), Postives = 144/235 (61.28%), Query Frame = 3
Query: 501 LVIGGNRGLGLEVVRHLKERESTILATTRTTNADLEAVGVSVLEGIDVADKNSGTKLVEAVQKELGEGGTLDYVICNVGILIPDTFEDPKFDAAVKMYEVCVLGPLRVLQALVVSGLLREGSSIGMVTSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKPRGVAIVNIHPGFMKTSMTEM--YADKYDELGAIGPEEAAPGIVKAVEDLTLENTGKFIAPKGSKSLG 1199
LVIG +RGLGLE+ + L + + AT R+ DL + G+SV+ ID+ + +G K+ + + LD+VI N G+ +T +P ++A V+MY+V + P+ + LV + LL + ++T+EGGS+ LRT+ EGG N+GHH SK A NM+GKL A+D+ +GV + IHPGFM+T MT+ Y +D GA+ P EAA ++ + L +E TG F AP+G + +G
Sbjct: 5 LVIGASRGLGLELAKLLHAQGHEVFATVRSQTHDLPS-GISVISDIDIGSEGAGAKIANDIGQR-----KLDWVIVNAGVFKAETLSEPNYEAEVEMYKVVAIAPVFIAHHLVKADLLAPSAKFILITTEGGSIALRTQEEGGGNHGHHGSKAAANMVGKLLAIDLYSKGVTVAMIHPGFMRTDMTKSVGYDKFWDAGGAVLPSEAAKSTIEFISSLNIEQTGTFWAPRGPRDIG 233 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1089.796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1089.796.1 >prot_Ecto-sp13_S_contig1089.796.1 ID=prot_Ecto-sp13_S_contig1089.796.1|Name=mRNA_Ecto-sp13_S_contig1089.796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp MTRTALRSAVVVFSAFAQHSTSFVLRGSPGAAPGAFTQHPRGQHPSNAPMback to top mRNA from alignment at Ecto-sp13_S_contig1089:5512..11349+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1089.796.1 ID=mRNA_Ecto-sp13_S_contig1089.796.1|Name=mRNA_Ecto-sp13_S_contig1089.796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5838bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1089:5512..11349+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1089:5512..11349+ >mRNA_Ecto-sp13_S_contig1089.796.1 ID=mRNA_Ecto-sp13_S_contig1089.796.1|Name=mRNA_Ecto-sp13_S_contig1089.796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1089:5512..11349+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |