mRNA_Ecto-sp13_S_contig10885.792.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: A0A6H5KXU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXU2_9PHAE) HSP 1 Score: 245 bits (626), Expect = 7.430e-74 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 1
Query: 1 QVTFKVEFQAGASGRNFGWVKLDGESLAVAVAAAGWARVKDQGASSKSSELEELVELGKTAEANKLGIFTDDSAKQEAGSREVKWTDVDGVAILAAHKGVPVKATIEHLRDGSSYRALLHDSWTMIS 381
QVTFKVEFQAGASGRNFGWVKLDGESLAVAVAAAGWARVKDQGASSKSSELEELVELGK AEANKLGIFTDDSAKQEAGSREVKWTDVDGVAILAAHKGVPVKATIEHLRDGSSYRALLHDSWTMIS
Sbjct: 69 QVTFKVEFQAGASGRNFGWVKLDGESLAVAVAAAGWARVKDQGASSKSSELEELVELGKNAEANKLGIFTDDSAKQEAGSREVKWTDVDGVAILAAHKGVPVKATIEHLRDGSSYRALLHDSWTMIS 195
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: W7TNM8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNM8_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.050e-14 Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 1 QVTFKVEFQAGA-SGRNFGWVKLDGESLAVAVAAAGWARVK---DQGASSKSSELEELVELGKTAEANKLGIFTDDSAKQEAGSRE-VKW-TDVDGVAILAAHKGVPVKATIEHLRDGSSYRALLHDSWTMIS 381
QV+FKV++ + R FG + L+GESL V GWARV+ S S ELEELV L A A K G+ ++ E +RE V+W VD AIL KG P + TIE++RDG ++RAL+ DS T ++
Sbjct: 72 QVSFKVDYTVPMLNNREFGTITLNGESLNRTVVKEGWARVRLPRTGNESEASPELEELVRLEAEALAEKKGLHAGEAG--EGATREGVQWGPGVDTEAILQRIKGKPTRMTIEYVRDGGAFRALVLDSHTYVN 202
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: A0A2Z7DEI5_9LAMI (Ribonuclease n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7DEI5_9LAMI) HSP 1 Score: 72.4 bits (176), Expect = 2.810e-12 Identity = 48/127 (37.80%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1 QVTFKVEFQAGASGRNFGWVKLDGESLAVAVAAAGWARVKDQGASSK--SSELEELVELGKTAEANKLGIFTDDSAKQEAGSREVKWTDV------DGVAILAAHKGVPVKATIEHLRDGSSYRALL 357
+VTFKV++ + R FG V + ++LA+ V AAGWA+VKD G S L EL+ L + A+ +G ++ EA R + + + D VA+LAA+KG P++A ++H+RDGS+ R L
Sbjct: 74 EVTFKVDYTVASINREFGTVFIGDKNLALIVVAAGWAKVKDVGQQKGEVSPFLAELLRLEEQAKQQGVGRWSRVPGAAEASVRNLPPSAMSDPGSFDVVALLAANKGSPLEAIVDHVRDGSTLRVHL 200
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: A0A1C7NH35_9FUNG (Nuclease domain-containing protein 1 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NH35_9FUNG) HSP 1 Score: 71.2 bits (173), Expect = 7.070e-12 Identity = 46/123 (37.40%), Postives = 75/123 (60.98%), Query Frame = 1
Query: 1 QVTFKVEFQAGASGRNFGWVKL-DGESLAVAVAAAGWARVKDQGASSKSSE--LEELVELGKTAEANKLGIFTDDSAKQEAGSREVKWT-DVDGVAILAAHKGVPVKATIEHLRDGSSYRALL 357
+V+F ++ + R +G + L +G+++A AGW +V++ + + E LE+L +L K AE +LG+++DD +K G R+V + D DG A L HKG P+ A IE +RDGS++R LL
Sbjct: 69 EVSFVSDYTVPTTQREYGTIYLSNGDNVAELGVKAGWLKVREGKTTREDQEEQLEKLQDLQKEAEDARLGLWSDDQSK---GVRQVSFNFDGDGRAFLNKHKGKPLDAVIEQVRDGSTFRVLL 188
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: D8SE51_SELML (Ribonuclease n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SE51_SELML) HSP 1 Score: 70.9 bits (172), Expect = 9.690e-12 Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 1
Query: 1 QVTFKVEFQ-AGASGRNFGWVKLDGESLAVAVAAAGWARVKDQGASSKSSELEELVELGKTAEANKLGIFTDDSAKQEAGSREVK---------WTDVDGVAILAAHKGVPVKATIEHLRDGSSYRALLHDSWTMI 378
+VTFKV++ A + R FG V +D ++A+AVA+AGWA+V+ QGA KS +EEL++ + A LGI+ AG R ++ + D A+L + KG P++A +E +RDGSS+R L S+ +
Sbjct: 70 EVTFKVDYAVANLNNREFGSVFMDDANVALAVASAGWAKVR-QGAE-KSPFIEELLKAEEQARQQGLGIWNK-VRNGGAGERSIRSIPPSAIGDTSTFDARALLESSKGKPLRAFVEQVRDGSSFRVYLLPSFQFV 202
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: A0A830D1B1_9LAMI (Ribonuclease n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D1B1_9LAMI) HSP 1 Score: 70.5 bits (171), Expect = 1.330e-11 Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1 QVTFKVEFQAGASGRNFGWVKLDGESLAVAVAAAGWARVKDQGASSKSSE--LEELVELGKTAEANKLGIFTDDSAKQEAGSREVKWTDV------DGVAILAAHKGVPVKATIEHLRDGSSYRALL 357
+VTF+V++ + R FG V L +++A+ VAAAGWA+V++QG + L EL+ L + A+ LG + E+ R++ + V D +A+LAA KG P++A ++ +RDGS+ R L
Sbjct: 76 EVTFRVDYTVPSINREFGSVFLGDKNVALLVAAAGWAKVREQGQQKGEASPFLAELLRLEELAKNQGLGRWNRAPGASESAIRDLPPSAVSDSGNFDAMALLAAKKGSPLEAIVDQVRDGSTIRVYL 202
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: A0A087SNJ1_AUXPR (Ribonuclease n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SNJ1_AUXPR) HSP 1 Score: 67.0 bits (162), Expect = 2.140e-10 Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 4 VTFKVEFQAGAS-GRNFGWVKL-DGESLAVAVAAAGWARVKDQGASSKSSELEELVELGKTAEANKLGIFTDDSAKQEAGSREVKWTDV-DGVAILAAH-KGVPVKATIEHLRDGSSYRALL 357
V F+VE+ S GR FG V L + +++AVAV AAG+A+V+ G +S+ E L + AEA LG++T D+A EA R+V +D D + LAA KG PV+A +E + GS RA L
Sbjct: 76 VVFRVEYTLDQSAGREFGSVFLNERDNVAVAVVAAGYAKVRPAGGQ-QSAFYENLARAQEQAEAKALGLWTKDAAALEAAVRDVTSSDAFDAASFLAATGKGKPVQALVEAVISGSMLRATL 196
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: A0A3M7L4X2_AUXPR (Uncharacterized protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L4X2_AUXPR) HSP 1 Score: 67.0 bits (162), Expect = 2.200e-10 Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 4 VTFKVEFQAGAS-GRNFGWVKL-DGESLAVAVAAAGWARVKDQGASSKSSELEELVELGKTAEANKLGIFTDDSAKQEAGSREVKWTDV-DGVAILAAH-KGVPVKATIEHLRDGSSYRALL 357
V F+VE+ S GR FG V L + +++AVAV AAG+A+V+ G +S+ E L + AEA LG++T D+A EA R+V +D D + LAA KG PV+A +E + GS RA L
Sbjct: 409 VVFRVEYTLDQSAGREFGSVFLNERDNVAVAVVAAGYAKVRPAGGQ-QSAFYENLARAQEQAEAKALGLWTKDAAALEAAVRDVTSSDAFDAASFLAATGKGKPVQALVEAVISGSMLRATL 529
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: A0A2K3D8G2_CHLRE (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D8G2_CHLRE) HSP 1 Score: 62.0 bits (149), Expect = 1.220e-8 Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 10 FKVEFQAGASG-RNFGWVKLD-GESLAVAVAAAGWARVKDQGASSKSSELEELVELGKTAEANKLGIFTDDSAKQEAGSREVKWTDVDGVAILAAH--KGVPVKATIEHLRDGSSYRALLHDSWTM 375
F+V++ A G R FG V L+ +++A+AV AAGWA+V+D G KS +++L + A+ + LG++T D A+ RE D D ++L A KG V A +E + GSS R L + T+
Sbjct: 77 FRVDYVVEAIGNREFGSVFLNQNDNVALAVVAAGWAKVRDAG-KEKSPYMDDLKRAEEAAQGSGLGLWTKDPARTARAVRETAGQDDDAASLLLAKVGKGGMVDAVVEAVLGGSSLRVSLLPTGTI 201
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Match: UPI001C9C4F40 (staphylococcal nuclease domain-containing protein 1 n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C4F40) HSP 1 Score: 59.7 bits (143), Expect = 7.760e-8 Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 4 VTFKVEFQAGASGRNFG--WVKLD--GESLAVAVAAAGWARVKDQGASSKSSELEELVELGKTAEANKLGIFTDDSAKQEAGSREVKWTDVDGVAILAAHKGVPVKATIEHLRDGSSYRALL 357
VTF E AS R +G W+ D GE++A ++ + G A VK G + S L L EL A+A G ++ + + R+VKW+ + I+ + G PVKA IEH+RDGS+ +ALL
Sbjct: 91 VTFAEEKSVSAS-RTYGSVWIGKDANGENVAESLVSEGLATVKRDGVRNPSPALLRLQELEDAAKAAGKGKWSGEPSSDHI--RDVKWSVENPRVIVDKYGGKPVKAIIEHVRDGSTVKALL 209 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10885.792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10885.792.1 >prot_Ecto-sp13_S_contig10885.792.1 ID=prot_Ecto-sp13_S_contig10885.792.1|Name=mRNA_Ecto-sp13_S_contig10885.792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp QVTFKVEFQAGASGRNFGWVKLDGESLAVAVAAAGWARVKDQGASSKSSEback to top mRNA from alignment at Ecto-sp13_S_contig10885:2..1941- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10885.792.1 ID=mRNA_Ecto-sp13_S_contig10885.792.1|Name=mRNA_Ecto-sp13_S_contig10885.792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1940bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10885:2..1941- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10885:2..1941- >mRNA_Ecto-sp13_S_contig10885.792.1 ID=mRNA_Ecto-sp13_S_contig10885.792.1|Name=mRNA_Ecto-sp13_S_contig10885.792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=381bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10885:2..1941- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |