mRNA_Ecto-sp13_S_contig10874.783.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10874.783.1
Unique NamemRNA_Ecto-sp13_S_contig10874.783.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: D8LGC2_ECTSI (Lon protease homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC2_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 4.850e-160
Identity = 303/309 (98.06%), Postives = 303/309 (98.06%), Query Frame = 1
Query:    1 MSSEDVAPVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXX-EGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGEE 924
            MSSEDVAPVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXX EGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRL DQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQA   ILEETSLEKRLRRVLELVREQTRVLSIASKI SEVEGKLNSRHREYYLRQQLKAIRSELGEE
Sbjct:    1 MSSEDVAPVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLHDQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQA---ILEETSLEKRLRRVLELVREQTRVLSIASKINSEVEGKLNSRHREYYLRQQLKAIRSELGEE 306          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: A0A6H5K538_9PHAE (Lon N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K538_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 1.120e-134
Identity = 246/312 (78.85%), Postives = 250/312 (80.13%), Query Frame = 1
Query:    1 MSSEDVAPVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARI----AILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGEE 924
            MS +DVAPVQLPVFVVRDRVLFPGGLLRLSVGKP+SVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEE SAS               XXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTG+ETFK                                        VKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARI    AILEETSLEKRLRRVLELVREQTR+LSIASKI SEVEGKLNSRHREYYLRQQLKAIRSELGEE
Sbjct:    1 MSPDDVAPVQLPVFVVRDRVLFPGGLLRLSVGKPQSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEERSASDDVAIFRDHQQRPGAXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGNETFK----------------------------------------VKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIVSCGAILEETSLEKRLRRVLELVREQTRILSIASKINSEVEGKLNSRHREYYLRQQLKAIRSELGEE 272          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: A0A2R5GJ38_9STRA (Lon protease homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ38_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.600e-40
Identity = 106/305 (34.75%), Postives = 161/305 (52.79%), Query Frame = 1
Query:   22 PVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXEGRIL---STMSRVGCAAKVVQMGRVTG--SETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGE 921
            P QLP+  +R RVL PG LLRL +G+P SVRLVES+  +      +         G  + V+       A      AS                           G      ++  + G  A+V+Q+ ++ G  S  F++++LV+G+SR+ +  +   E      +    D GS+ D EV+AL++N+RE AQ LLE+ + R+ P     +E++D +  ASPG +AD+LA++++    +KQ    +L E  L  RLRR LEL+  Q  V  ++ KI++EVEGKL +  REYYLRQQL+AI  ELG+
Sbjct:   13 PTQLPLLTIRRRVLVPGVLLRLQIGRPNSVRLVESIWDSSTRSFKK---------GALLAVSTVKTESDAASSSSGASAKKAIGDKNNNKDAGAGAEPLEVVDMPGASEDGPTSCYKAGTVARVLQLSKINGKDSSNFQFTLLVEGLSRMSVEEIVRTEPYTVAKIAWKADIGSVNDTEVRALAINVREIAQDLLELQRKRNSPLGKKTKEVIDNLDRASPGRLADLLAANLDASVEEKQH---VLAEQELAPRLRRTLELLNRQVEVFRMSDKIQNEVEGKLKNTQREYYLRQQLRAINEELGQ 305          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: A0A4D9CQU2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQU2_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.320e-32
Identity = 111/330 (33.64%), Postives = 157/330 (47.58%), Query Frame = 1
Query:   22 PVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVL-----------------------------KSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGEE 924
            P  LP+ V+R+RVLFPGGLLRLSVGKP+SVRL+E  L +++  L    +     GG   + A+     GA +                                        SR G      +          K  + +     +R+ S+ EE              GS+AD+ VKAL++NLR+A Q L + L                             KS+S P   +ARE+ +++  ASP A+AD L + +N+P   KQ    +LEE  LE RLR  LEL+REQ  ++ ++SKI +EVE +L++R REYYLRQQLK I+ +LGEE
Sbjct:   23 PSTLPLLVIRNRVLFPGGLLRLSVGKPRSVRLIEDFLVSQKRPLQPQHHSSPLRGGFIAVAALIP---GASE----------------------------------------SREGGGGXXREGXXXXXXXXXKGLLALTPYFIVRVRSLGEE--------------GSLADSRVKALAINLRDATQELHKALRARATGALDVTGNGSSSNKNALDGATGVTKSQSQPFLPSAREVAESIQNASPSALADELVTHLNVPLEAKQR---LLEEPRLEARLRGALELIREQVEIIRLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEE 292          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: A0A1F9KWE5_9DELT (Lon protease n=1 Tax=Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 TaxID=1797895 RepID=A0A1F9KWE5_9DELT)

HSP 1 Score: 130 bits (327), Expect = 3.980e-30
Identity = 99/302 (32.78%), Postives = 163/302 (53.97%), Query Frame = 1
Query:   16 VAPVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGE 921
            V P +LPV  +R+ VLFPG ++ L +G+PK+VRLVE  +  +++G                LVA+  QR   VD+                                  + + +  +GCAA++V++ + +      +SV+VQG+SR+RL   S+    L   +    D  S    EV+AL+++L++ A+ +L ++         +A E+L+ V  A  G +AD++AS++    ++KQ+   +LE   L +R+RRVLEL+  Q  VL +++KI S+V+G+++   REYYLRQQLKAI+ ELGE
Sbjct:   34 VIPEELPVLTLRNTVLFPGSIVPLGIGRPKTVRLVEESI--KDNG----------------LVAVVAQRDPDVDDP---------------------------------VPADLYGLGCAARLVKLVKASKDN---FSVVVQGLSRVRLTEYSQSLPYLKARI-HAVDDSSTNVVEVEALTMSLKKTAREVLRLIPELPP----SAAELLERVDDA--GVLADLIASNVEASVDEKQS---VLETFDLVQRMRRVLELLSRQLEVLKLSNKISSQVKGEMSKTQREYYLRQQLKAIKDELGE 271          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: A0A2E6VX71_9DELT (Lon protease n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VX71_9DELT)

HSP 1 Score: 128 bits (322), Expect = 1.840e-29
Identity = 91/300 (30.33%), Postives = 163/300 (54.33%), Query Frame = 1
Query:   22 PVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGE 921
            P +LP+  +R+ V FPG ++ L++G+ K++RL+E    TR+ G                L+ I TQ+   +D                                    +  + R+G  A+V+++ R TG + F  +++V+G+SR  +   ++EE     T+    D+G+  D EV+ALSLNL+  A+ ++++L        + A+++L++++    G +AD++ ++I+    +KQ    ILE   L++RL++VLEL+  Q  VL +++KI S+V+G+++   REYYLRQQLKAI+ ELG+
Sbjct:   22 PSELPILPLRNSVFFPGAVMPLTIGRAKTIRLIEET--TRDSG----------------LLGIITQKAPEIDNP---------------------------------TIEDLYRIGTVARVIKLAR-TGKDGF--NIVVEGISRFEINQFTQEEPYFTATITPRLDEGT-GDVEVEALSLNLKTTAREVIDMLPEIP----VMAKQLLESIN--DGGHLADLITANIDATIEEKQE---ILEAVQLKRRLKKVLELLSRQYEVLKLSNKINSQVKGEMSRTQREYYLRQQLKAIKDELGD 257          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: UPI0019A15C56 (Endopeptidase La n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI0019A15C56)

HSP 1 Score: 111 bits (278), Expect = 1.140e-23
Identity = 94/305 (30.82%), Postives = 150/305 (49.18%), Query Frame = 1
Query:   22 PVQLPVFV----VRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIA-DAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGE 921
            P +LP  V    +R+ VLFPG ++ + VG+PKSV+LVE  +                      ++ I TQ+   V++                                      + RVGCAA+++++ ++       YSV++QGV RIR+  ++  +  +   V  L D  S   D E +AL LN++E A+ L+ ++     PR   A  +LD+ S   PG VAD++ S+++I   +KQ    +LE   +  RLR+VL L+  Q  +L +  +I S+V+ ++    REY LRQQLKAI+ ELGE
Sbjct:    9 PHELPDVVSLLPLRNSVLFPGAIIPIDVGRPKSVKLVEEAIAHERP-----------------IIGIVTQKEARVEDPSDGD---------------------------------IHRVGCAARILKVIKLARDN---YSVILQGVMRIRIDEITGHDPFIQAKVSELRDVISPRLDVEAEALVLNIKETARKLISLVPEL--PR--EAAALLDSTS--DPGQVADMVISNLDIEPAEKQE---VLEAIDVLDRLRKVLTLLTRQLEILKVRERINSQVQEEMGHSQREYVLRQQLKAIKGELGE 251          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: G4Z1Q4_PHYSP (Lon protease homolog n=7 Tax=Phytophthora TaxID=4783 RepID=G4Z1Q4_PHYSP)

HSP 1 Score: 111 bits (278), Expect = 1.190e-23
Identity = 95/314 (30.25%), Postives = 155/314 (49.36%), Query Frame = 1
Query:    4 SSEDVAPVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLG-TREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAE-------VKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGE 921
            +S   AP+QLP+  +  +VLFP   LRL++    +++L++ L+   R   + R + GG +    ++ +AIFT+R  A   +G A                                  +  VG  A+VVQ+ R+ G      SVLVQG+ R++L  V++    L G+V RL     +  A+       ++ L+L L+   Q  LE  KS    R  N   ++DA+  +S G +ADV+ S +N+  ++KQ    +LE   +  R    + L+ ++T    +  KI+SEV+ KL    +E+ LRQQL+AI+ ELGE
Sbjct:    6 TSTATAPLQLPILPLDGKVLFPRTYLRLAITSASALQLLKDLVWEVRAPKMSRRSGGGDTAASTSLTLAIFTRRSSA---DGDADTHQVLPTT-------------------AEAKDAVYSVGTVARVVQLTRMQGGVP-GLSVLVQGLHRVQLQDVAQTRPYLVGSVQRLVAPVPVKGAKAEETALTLEQLALRLKHLTQEYLETAKSAPLLRRSNG--LVDAIGNSSAGELADVVVSYLNVGVDEKQQ---VLEAVPVALRCELAVALLEQETEKARLQRKIQSEVQDKLEGTRKEFLLRQQLEAIKKELGE 291          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: A0A534NCQ0_9DELT (Endopeptidase La (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534NCQ0_9DELT)

HSP 1 Score: 107 bits (268), Expect = 1.410e-23
Identity = 64/189 (33.86%), Postives = 128/189 (67.72%), Query Frame = 1
Query:  355 MSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGE 921
            + ++G  A++V++ ++ G +   YS++VQG++R R++ + +E   L   +  + D+  + + E++AL +NL++ A+ ++E++     P A  A E++++++   PG +AD++A+++++P  +KQ    +LE   L++R++ VLEL+  +  +L ++SKI S+V+G+++   REYYLRQQLKAI+ ELGE
Sbjct:   88 LHKMGTVARIVKLLKM-GEDN--YSLVVQGLARFRVVELVQEHPYLKARIEPVDDKSPVDEVEIEALGINLKKLAREVIEMMPEL--PAA--ATELVESIT--QPGHLADLIAANVDVPIEEKQQ---VLETVDLKERMKLVLELLNRKREILKLSSKIDSQVKGEMSKTQREYYLRQQLKAIKEELGE 264          
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Match: A0A2S9XY18_9DELT (Lon protease n=4 Tax=Myxococcales TaxID=29 RepID=A0A2S9XY18_9DELT)

HSP 1 Score: 110 bits (275), Expect = 2.830e-23
Identity = 87/300 (29.00%), Postives = 148/300 (49.33%), Query Frame = 1
Query:   22 PVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDGLHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASXXXXXXXXXXXXXXXXXXXXXXXXXXEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVSRIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVLKSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEETSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKAIRSELGE 921
            P  + +  +R+ VLFPG ++ + VG+PKSV+L+E  +                      ++ I TQ+    ++ G+                                   +  VGCA +++++ ++       YSV++QGV RI++  +  +E  L   V  L +    +  E +AL  N++E A+ L+ ++     PR   A  +LD+VS   PG VAD++AS+++I  ++KQ    +LE   +  RLR+VL L+  Q  +L I  +I ++V+ ++    REY LRQQLKAI+ ELGE
Sbjct:   15 PEVVSLLPLRNSVLFPGSIIPIDVGRPKSVKLIEEAIAAERP-----------------VIGIVTQKAARTEDPGA---------------------------------DDLHEVGCAVRILKVIKLARDN---YSVILQGVMRIKIEELVSDEPFLQARVSELPEHDP-SPLEAEALVANIKETAKKLISLVPEL--PR--EAAALLDSVS--EPGQVADLVASNLDIEPSEKQE---VLEAFDVSTRLRKVLTLLTRQLEILEIRERINTQVQEEMGHSQREYVLRQQLKAIKGELGE 251          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10874.783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGC2_ECTSI4.850e-16098.06Lon protease homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K538_9PHAE1.120e-13478.85Lon N-terminal domain-containing protein (Fragment... [more]
A0A2R5GJ38_9STRA2.600e-4034.75Lon protease homolog n=1 Tax=Hondaea fermentalgian... [more]
A0A4D9CQU2_9STRA3.320e-3233.64Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1F9KWE5_9DELT3.980e-3032.78Lon protease n=1 Tax=Deltaproteobacteria bacterium... [more]
A0A2E6VX71_9DELT1.840e-2930.33Lon protease n=1 Tax=Myxococcales bacterium TaxID=... [more]
UPI0019A15C561.140e-2330.82Endopeptidase La n=1 Tax=Deltaproteobacteria bacte... [more]
G4Z1Q4_PHYSP1.190e-2330.25Lon protease homolog n=7 Tax=Phytophthora TaxID=47... [more]
A0A534NCQ0_9DELT1.410e-2333.86Endopeptidase La (Fragment) n=1 Tax=Deltaproteobac... [more]
A0A2S9XY18_9DELT2.830e-2329.00Lon protease n=4 Tax=Myxococcales TaxID=29 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10874contigEcto-sp13_S_contig10874:96..4619 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score486.9
Seed ortholog evalue7.1e-135
Seed eggNOG ortholog2880.D8LGC2
Preferred nameLONP2
Model size924
KEGG koko:K01338,ko:K08675
KEGG Pathwayko04112,map04112
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0002020,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006139,GO:0006259,GO:0006508,GO:0006605,GO:0006625,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007005,GO:0007031,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009791,GO:0009894,GO:0009987,GO:0010033,GO:0010467,GO:0010565,GO:0014070,GO:0015031,GO:0015833,GO:0015919,GO:0016043,GO:0016485,GO:0016558,GO:0016560,GO:0016787,GO:0017038,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0019899,GO:0022622,GO:0031323,GO:0031329,GO:0031907,GO:0031974,GO:0031998,GO:0032042,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0040007,GO:0042221,GO:0042579,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045184,GO:0046320,GO:0046483,GO:0046907,GO:0048364,GO:0048527,GO:0048528,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0050994,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0055085,GO:0062012,GO:0065002,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0090304,GO:0090696,GO:0099402,GO:0140096,GO:1901360,GO:1901564
Exons6
EggNOG free text desc.ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial
EggNOG OGsCOG0466@1,KOG2004@2759
EC3.4.21.53
Cds size924
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10874.783.1prot_Ecto-sp13_S_contig10874.783.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10874 96..4619 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462560.562568-CDS-Ecto-sp13_S_contig10874:95..2841681462560.562568-CDS-Ecto-sp13_S_contig10874:95..284Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10874 96..284 -
1681462560.5752282-CDS-Ecto-sp13_S_contig10874:987..11791681462560.5752282-CDS-Ecto-sp13_S_contig10874:987..1179Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10874 988..1179 -
1681462560.5848181-CDS-Ecto-sp13_S_contig10874:1780..19001681462560.5848181-CDS-Ecto-sp13_S_contig10874:1780..1900Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10874 1781..1900 -
1681462560.5940483-CDS-Ecto-sp13_S_contig10874:2268..24701681462560.5940483-CDS-Ecto-sp13_S_contig10874:2268..2470Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10874 2269..2470 -
1681462560.6073334-CDS-Ecto-sp13_S_contig10874:3241..34291681462560.6073334-CDS-Ecto-sp13_S_contig10874:3241..3429Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10874 3242..3429 -
1681462560.6162798-CDS-Ecto-sp13_S_contig10874:4586..46191681462560.6162798-CDS-Ecto-sp13_S_contig10874:4586..4619Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10874 4587..4619 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10874.783.1

>prot_Ecto-sp13_S_contig10874.783.1 ID=prot_Ecto-sp13_S_contig10874.783.1|Name=mRNA_Ecto-sp13_S_contig10874.783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp
MSSEDVAPVQLPVFVVRDRVLFPGGLLRLSVGKPKSVRLVESLLGTREDG
LHRHANGGGSGGGPTILVAIFTQRVGAVDEEGSASDDVAIVRDQQQRPGA
GGGGGGGGGGGEGRILSTMSRVGCAAKVVQMGRVTGSETFKYSVLVQGVS
RIRLLSVSEEELMLHGTVVRLFDQGSIADAEVKALSLNLREAAQALLEVL
KSRSHPRAMNAREILDAVSAASPGAVADVLASSINIPTNQKQARIAILEE
TSLEKRLRRVLELVREQTRVLSIASKIKSEVEGKLNSRHREYYLRQQLKA
IRSELGEE
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mRNA from alignment at Ecto-sp13_S_contig10874:96..4619-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10874.783.1 ID=mRNA_Ecto-sp13_S_contig10874.783.1|Name=mRNA_Ecto-sp13_S_contig10874.783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4524bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10874:96..4619- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCGGAAGATGTCGCTCCTGTGCAGCTGGTGAGCCCCCGCAACGT AATCGTGTGGCAATGACGAGGTGCTTCAAAGGCCAGCGCTTGACAGGAAG GGCTTGTTGGCCTCAACCATTTTTCCATTTTGAAGTTGGCAGTCTCTCGC ACCGGCGACCACTTTCGGTGCGCGACGTTGAACAGGTGGTTAGCCCACGG CGTATAGCTGTATGGATCTTGCCTTGTTGATCCCCCATCGAGTGCCTGGG GTACACCTCAAGTCACGGGGGACATTTGTGACAGAGATGTACTCTTCCCA ACGACAGCCCTGACCTGCTGTACGTACATATATGTGCGATCAGACATTTG CGAGTGGGCTGTGTTCCCTGCGATCGCACCGCCATTACACCGGATAGTTC ACATGAGAGGAGTGATTCTGTCGCTGCATGTCTACGACCGTTCTCTAACT CTTGTCCTCACTCGAAGCGTGTGTCATAGTGGTCTATGGTGCCCCCCCTC CTACAGCCGTACTGCTTCAACCCGGCTGTTGTTAGGAAACATAAGCGTGT ACAAGTACCCCTCAAGTTCTCCGTCAGTAATAAGCTGCTGCTACAAGTAC TGCCATCCCCGTGTTTTCCCTCTCAACAACCCACACCTGCTGCATTCCCG TTGGGCATGGGTCCCGTGCCTCACTCGGGAAGGCCGACCTGCCGCTCCAT GAAACCTCCCATCCATTAGCAGTCTATTCGTTACTCAGGATGAGTCGATT TCCTGCTGTGGACTCCGCACTGTTGTGATTAGCTGGCGATGGCATGTATC TGTACGTGAGCTGGGTCATCTCGCCGCCGTCGGAAGTGTTCGTCGTGTGT GATTCCGCCGCCAGACCCCCCAAGATGGTGGGGACGGGGTGGGGGGCATT CCAGAGAATGTGTACGCGCTGTCGACGAGGATAGATAGGCGCGTACGAAC AAGCATCTGTGCTGTGCCCCCCGGTATTTCGTACAGTAGGTACGCGCAGG GTGCCTTCTCTTCTTCCCAGTCGCCTTACACATTACAATACAAGAGCTTC GTAGTACTACTGTAGATCTCGGATAGTGCTACGCCGCCGCCCTACTACCC GGCCGACCCCTCTGTTGTTACGCGCACCCCCCATGCGCGCACGCCTGTCT TCACCCCACGCAACGACGGCGGGTTTTCGTGGTGTGAAAGCCGGTGTTCG TGGTGCGGGACCGGGTGCTGTTCCCTGGAGGCCTGCTGAGGCTAAGCGTG GGCAAGCCCAAGTCGGTGCGGCTGGTGGAGTCCCTCCTCGGCACCCGAGA AGACGGCCTCCACCGACACGCCAACGGGGGGGGAAGCGGAGGAGGGCCTA CCATCCTCGTCGCCATATTCACACAGAGGTATGCATACGTGTATTTACAC GGAAGTATCATACGTGTCAAACAACGGAGGGAACGCACGCCTATCTTGAG ACTCGAGGTATGTCGTGAAGCCGCATTGCCATGGGTGGTTGTGGGGTCAG AAACCACACTCGAAACGATTGGCATGCACATTAATAGTTTTTTTCCGTCT CTCTTCTTTGACTTAGCGGGGTTGCCCGAGAGTTGCGGGTAGTCTGCAAC AGCTGGTCGAAATATCGACTGCTACATAGCACTGACGGTGTCCAACGCAC AGGTGGTGAGTGCCCTCGGAAGCATTCGAGGATTCCAGCCATGTTATGTC CACCAACCCTGATCGGCATCTACGCTTGGTTCAAGCGTCGCCCATAGCAC TCACTCCAGCTGGTGGTTCCTCTCTTGTTTCCAATCCCCACGCAATGACG TGCTCCGTGTGCCTACTCTCCTTGCTCTCATTCTCCCTATAAAGTATTTC CGTTTGCTTCCTGGTTGTTGTGTCGTAAATTTAGCTTTTTCCTCTCTCTT TGTTCTCTTTCTCTCATCTGCGTACCATGCGTACAGCCGACGAATGCTTG TGGGCACTCTCCAAATAGCGTGAGGACATCACAACGTTTTTGTCCCTTTT CATGACTCTGCCGGCACGTACTCGTTGGTCTGCCGAGCTTACCCGTGCCA TACATGACCCCTTGGCGATTTGTATGACGATGCACCTCTTCTTTGCGCGT GTGTATTTTCTTTTTCCACCGCGCCGTTATGCCGGCCATACGCTGCAAGG GTCGGCGCTGTAGACGAGGAGGGGTCGGCATCCGATGACGTCGCGATTGT CCGAGACCAGCAGCAACGGCCGGGGGCGGGTGGCGGCGGAGGCGGCGGAG GCGGAGGCGGCGAGGGCCGCATCCTCAGCACCATGAGCCGTGTCGGGTGT GCGGCCAAGGTGGTGCAGATGGGGAGGGTCACTGGCAGCGAAACCTTCAA GGTGACGCTGAGACCGGGTGCTGGTGTTACTGCTTGGTTTTTCTGTTGTG TCTTCGTTTCTGCTGCTGCTGCTGTGGTTATCATTGTTGCTTGCTGATGT TATGTTTGTGTCCGTTGCTCTGCTGCTGCTGGCACTGCTGCTGCTGCTGC TGCTGATGGTGCTTTTAATGCTGCCGCGGGCTGTGTGGCTCTGTGTTTTT TTTGTATGTCGGCCTGGAATTTCGCGTCTGATTTCGACCTGATCCAGTCT GTTTCCAGCTCTCCTGCCCTCTCCCAGTTCTCGCCAGACCTCATGCCTAC TATCCCTCCCCACCCTGTCTTTCCATCGATCGAAACGGCCGCATCACTGG GGCTTTGCTGCCACAACAGTATTCTGTGCTCGTGCAAGGCGTGTCGCGCA TCCGTCTGCTGAGCGTTTCGGAGGAAGAGCTGATGCTACACGGGACTGTC GTGCGCCTCTTCGATCAGGGTTCAATCGCCGATGCGGAGGTGCGTGCGTG TTGCGGTTTCGTTTGGGTTCGGGTGTTCCCGGGCTCGGTTCACCAGCAGT AACAGTACCAGCAGCACCAGCAGTACCGTCAGCACCTGCAGCACCAGAAG AAGCAGCAACAGCACCAGCAGCACCGCCAAGAGTCTCGAGTTGCTTCGTG AGACCGCACCCCGTCCTCCAAACCTCCTCTCCGCCCCGGCCCCCCCCTCC CCCCCCCTCGGCCGGGGGAGCCCGATGACTAGACGGCGTATTCGCGTGTT TCGTCTCATTAAACCTCACCACGTTGGTCGGCCCGTGTGTGCGGTCCATC GTACGTAAAGAAACACAGCATACACATTGCCGCACACGAGCACCAGTGAG CGTTAGCTCTTGCAGGCCTCCACGCCGAATCTTGAAAGTAGATTGGGTGG GATTGGGTGGAGGCTGACAGATGTCAACAAAAGGGCATGACGGACGGAAA ACAAACAAGAAGGAAAAGAGGCTTTAGCAAGGTCGGCGGGGGATTGGGGA CAGGCATGACCTTCCTTCATCTTGGGGACCCACCATCTCTCCGCCTCGCT CTCTTTGCCCCTGTCTCGACCCCAACCCCCCTCCTCCCAGGTTAAGGCGC TGTCGCTGAACCTTCGAGAGGCGGCCCAGGCCCTGCTCGAGGTGCTAAAG TCGCGCAGCCACCCTAGGGCGATGAACGCTAGGGAGATACTCGACGCCGT GTCGGCGGCGTCCCCCGGAGCCGTCGCGGATGTCCTGGCCTCGAGCATTA ACATCCCCACGAACCAGAAGCAGGCGAGAATCGTCTCGTATGGTGTTTGT CCTCGTGGTTGTGTGTGAGCATCGTCGGCGCGCTGACCGGCTGCTTGCCA ATGCGCCTGTCCTTCAGCGGGAAAACCGTTTGTGTTCGCTTGTGTGTGGG TTGCGTGTTGTGTCTGCAGCGCACTTTATGTGAAACGCTATACTTTGTAG GAGTATTTCGCCGTTCGTGTCCGCGCATGAGAAGCCCGAACATGCGCACA CGCAACACCCAGGAGTTCGGTCATTTGTGTGTGCGTCGACTCATGCCATG TGGCATTTATTTTCGCCTGTTTTTTTTTGTTCTTCCTTTGTTTCGAAAGC CCGTCTCACAACTACCAGCATGGATCTCTGTGTGCAAAAGTCGCGGCTGC GTGTACTGGTCTAATGCTTGTCAGGCTCGGCAGCGTGTTGTTTTCTACGA GTTCATTCCTGGCGTTAGGTGAAGCCGGTGTTCCTGCCGAACCGCCCATT CCGTTTGGACCAAGAAAAGCCGCTCGAGAAGAACTACCCTGGCTTCCATC TTCTTCTTTTTCGACGTTTCCTCCGGTAGCGACACCCTCGCTTGTCACCC GAGAAGCTACTTCATATTCAGACGTCGGAAGCGTACCTCGAACAAAATGA GGGGGCTGCGGCAAGAGGCATTGTCCTTCATCAATCCCAACAACAACACC TTCCCCCGCGCTCATCCTACCCCTGTACCGGACAGGCCATTCTTGAGGAA ACCTCTCTCGAGAAGAGGCTGAGGCGGGTGCTGGAACTCGTGCGCGAGCA GACGCGGGTTCTCTCGATCGCCAGCAAGATTAAGTCGGAGGTGGAAGGAA AGCTCAACAGCCGGCACAGAGAGTACTACCTCCGGCAGCAGCTCAAGGCC ATCCGCTCTGAGCTCGGCGAAGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10874:96..4619-

>mRNA_Ecto-sp13_S_contig10874.783.1 ID=mRNA_Ecto-sp13_S_contig10874.783.1|Name=mRNA_Ecto-sp13_S_contig10874.783.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=924bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10874:96..4619- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCGGAAGATGTCGCTCCTGTGCAGCTGCCGGTGTTCGTGGTGCG
GGACCGGGTGCTGTTCCCTGGAGGCCTGCTGAGGCTAAGCGTGGGCAAGC
CCAAGTCGGTGCGGCTGGTGGAGTCCCTCCTCGGCACCCGAGAAGACGGC
CTCCACCGACACGCCAACGGGGGGGGAAGCGGAGGAGGGCCTACCATCCT
CGTCGCCATATTCACACAGAGGGTCGGCGCTGTAGACGAGGAGGGGTCGG
CATCCGATGACGTCGCGATTGTCCGAGACCAGCAGCAACGGCCGGGGGCG
GGTGGCGGCGGAGGCGGCGGAGGCGGAGGCGGCGAGGGCCGCATCCTCAG
CACCATGAGCCGTGTCGGGTGTGCGGCCAAGGTGGTGCAGATGGGGAGGG
TCACTGGCAGCGAAACCTTCAAGTATTCTGTGCTCGTGCAAGGCGTGTCG
CGCATCCGTCTGCTGAGCGTTTCGGAGGAAGAGCTGATGCTACACGGGAC
TGTCGTGCGCCTCTTCGATCAGGGTTCAATCGCCGATGCGGAGGTTAAGG
CGCTGTCGCTGAACCTTCGAGAGGCGGCCCAGGCCCTGCTCGAGGTGCTA
AAGTCGCGCAGCCACCCTAGGGCGATGAACGCTAGGGAGATACTCGACGC
CGTGTCGGCGGCGTCCCCCGGAGCCGTCGCGGATGTCCTGGCCTCGAGCA
TTAACATCCCCACGAACCAGAAGCAGGCGAGAATCGCCATTCTTGAGGAA
ACCTCTCTCGAGAAGAGGCTGAGGCGGGTGCTGGAACTCGTGCGCGAGCA
GACGCGGGTTCTCTCGATCGCCAGCAAGATTAAGTCGGAGGTGGAAGGAA
AGCTCAACAGCCGGCACAGAGAGTACTACCTCCGGCAGCAGCTCAAGGCC
ATCCGCTCTGAGCTCGGCGAAGAG
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