mRNA_Ecto-sp13_S_contig10871.781.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: D7FXJ9_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ9_ECTSI) HSP 1 Score: 352 bits (904), Expect = 6.030e-121 Identity = 172/181 (95.03%), Postives = 176/181 (97.24%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKNIIGDRPENADPAYESNYAISTRWVARDGSGLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV 543
TLGRLVFNIFEPVNLPVLIV+IKN IGDRPENADPAYESNY ISTRWVARDGSGLRGRVEISGTCWEDPS+PERVLVRF+KGSIEPDEGQDLDAWRKVIGVRD+EGTKDKG STLKEKAARLMLKVVFGFQGPAD LGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV
Sbjct: 123 TLGRLVFNIFEPVNLPVLIVAIKNTIGDRPENADPAYESNYVISTRWVARDGSGLRGRVEISGTCWEDPSMPERVLVRFTKGSIEPDEGQDLDAWRKVIGVRDVEGTKDKGPLSTLKEKAARLMLKVVFGFQGPADGLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV 303
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: A0A6H5JYC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC1_9PHAE) HSP 1 Score: 199 bits (506), Expect = 1.240e-62 Identity = 104/160 (65.00%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 64 IKNIIGDRPENADPAYESNYAISTRWVARDGSGLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV 543
+KN GDRPE ADPAYES Y IST WVARDG+GLRGRVEI+ T EGQDLDAWR VIGVRD EGTK+KG S LKEKAA+LMLKVVFGF+GPAD+LG RGELS EMKRSP G+ +++YLDEE+ VTRG +G LVVV RV
Sbjct: 1 MKNTCGDRPEPADPAYESPYDISTHWVARDGNGLRGRVEIAETY----------------------EGQDLDAWRNVIGVRDTEGTKEKGRLSMLKEKAAKLMLKVVFGFRGPADNLGRRGELSCEMKRSPSGHFEVLYLDEEIWVTRGHKGTLVVVTRV 138
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: A0A835ZKX0_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKX0_9STRA) HSP 1 Score: 143 bits (361), Expect = 9.250e-39 Identity = 84/186 (45.16%), Postives = 105/186 (56.45%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKNIIGDRP--ENADPAYESNYAISTRWVARD---GSGLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV 543
TLGRL FN+FEP LPV I I N + D P D E Y + +VAR G LRG V +SG CW D R+ V F G + P +GQDL W V R EG + + L +K LMLK+ GFQ PAD +G Y M R P+GYLDI+YLD+ +RVTRG +G++VVV+RV
Sbjct: 128 TLGRLAFNLFEPTKLPVSITHIVNTLEDVPAERQGDRPGELTYDLVNSFVARSPESGVELRGEVAVSGVCWPDSKDANRLRVAFGAGELRPAQGQDLAEWEAVFKPR--EGKEKPRV--PLGKKLTNLMLKLFMGFQPPAD--AGQGVQRYTMNRPPEGYLDILYLDDALRVTRGNRGSIVVVERV 307
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: A0A7S2TSA9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TSA9_9EUKA) HSP 1 Score: 117 bits (293), Expect = 3.210e-28 Identity = 66/184 (35.87%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKNIIGDRPENAD-PAYESNYAISTRWVAR-DGSGLRGRVEISGTCWEDPSI-PERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV 543
TLGR+ FN+F P L V + + N++ PE+ + P Y ++ A DG L CW D + P+R++V F++G +EP EG DLD W+ V K L L E R +++ + G + P L G + Y M + P G+LDI+YLDEE+R+TRG +G++V+VDR+
Sbjct: 189 TLGRMSFNMFAPRELVVTVKKMTNVLMPLPESPEYPERAGAYTVTAELKAEVDGKQLDMVFTSDAVCWPDGAEHPDRLMVAFTEGKLEPAEGADLDLWKGVFS------NPKKSLRQQLTEPLTRWLMRRMIGLE-PPKGLDVDGAMRYRMSKPPAGHLDILYLDEEIRITRGNRGSIVIVDRM 365
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: A0A846BZ97_9CYAN (Fimbrial protein n=4 Tax=unclassified Okeania TaxID=2634635 RepID=A0A846BZ97_9CYAN) HSP 1 Score: 111 bits (277), Expect = 8.330e-27 Identity = 62/181 (34.25%), Postives = 103/181 (56.91%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKNIIGDRPENADPAYESNYAISTRWVARDGSGLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV 543
TLGRL FN+FEP NL ++I S++ + E +++ S + L+G V G C+ P+ + + V F+ G++ P +G+DL W+ + G ++K LKE+ + LK++FG P GE+S+ MKRSPKG L+++YLDEE R+T+G++G ++V +R+
Sbjct: 79 TLGRLAFNMFEPTNLKLVIDSVRQPVVLLGEGEKRSHDIVVEFSI--IDELFPPLKGIVRNLGVCY--PADNQNLQVEFTGGTLGPQKGEDLSTWKDIFG-------QNKSSKKGLKEQLMSVFLKLMFGLVPPQGMNTETGEISFTMKRSPKGRLEVLYLDEEFRITKGEKGTVLVCERL 248
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: B1X0M5_CROS5 (PAP_fibrillin domain-containing protein n=1 Tax=Crocosphaera subtropica (strain ATCC 51142 / BH68) TaxID=43989 RepID=B1X0M5_CROS5) HSP 1 Score: 109 bits (273), Expect = 2.920e-26 Identity = 65/180 (36.11%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKNIIGDRPENADPAYESNYAISTRWVARDGSGLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDR 540
TLGRL FN+F+P NL V+I +K I E + + + + D L+G + G C+ P V V F+ G + P QDL+ W++V E + +KGL KE +LK++FG P GE+++EMKRSPKG I+YLDEE+R+ +G +G +VV+ R
Sbjct: 79 TLGRLAFNLFKPTNLKVVIDCVKQPILKLEEVNK--FSHDIVVEFTVIDSDFPKLKGLIYNLGICY--PDTDNTVQVEFTGGKLSPQPNQDLNLWKQVFNQ---EKSDNKGL----KEAFTSFILKIIFGLVPPNAMNNQTGEITFEMKRSPKGKSSILYLDEEIRINKGDKGTVVVLQR 247
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: UPI000D1F42B3 (fimbrial protein n=1 Tax=Cyanothece sp. BG0011 TaxID=2082950 RepID=UPI000D1F42B3) HSP 1 Score: 107 bits (268), Expect = 1.600e-25 Identity = 68/184 (36.96%), Postives = 102/184 (55.43%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKN--IIGDRPENADPAYESNYAISTRWVARDGS--GLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDR 540
TLGRL FN+F+P NL V+I +K I+ D E + ++ I + D + L+G V G C+ P+ E + V F+ G + P QDL W++V E + +KGL KE +LK++FG P GE+ ++MKRSPKG L I+YLDEE+R+T G++G ++V +R
Sbjct: 79 TLGRLAFNMFQPTNLKVVIDCVKQPVILLDEEE------KRSHDIIVEFTVIDPNFPELKGLVHNLGICY--PATDETLQVEFTGGKLTPQADQDLSVWKQVFNT---EKSDNKGL----KELFTSFILKLMFGLVPPKAMNEETGEIYFQMKRSPKGKLKILYLDEEIRITLGEKGTILVCER 247
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: B7KCL7_GLOC7 (PAP_fibrillin domain-containing protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KCL7_GLOC7) HSP 1 Score: 106 bits (264), Expect = 6.390e-25 Identity = 62/181 (34.25%), Postives = 102/181 (56.35%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKNIIGDRPENADPAYESNYAISTRWVARDGSGLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPR-GELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDR 540
TLGRL FN+F+P L ++I + + P N + + + + L+G V G C +PS + V+F+ ++P E ++L++W+ V + K L T KE+ +M K++FG P +++ P+ GE+S+ M RSPKG LDIIYLDEE+R+T+G++G ++V R
Sbjct: 80 TLGRLAFNMFQPAQLKLVIDRVCQPVF--PVNNGQQKSHDIIVEFTTIDDNFPQLKGIVHNFGIC--EPSSDRTLQVKFTGSVLKPQESENLESWKPVF-------KQQKSLKKTWKERLTSVMGKIMFGLV-PPEEMNPQTGEVSFTMNRSPKGSLDIIYLDEELRITKGEKGTVLVCQR 248
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: A0A7S4DXT7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXT7_9EUKA) HSP 1 Score: 106 bits (264), Expect = 1.130e-24 Identity = 61/184 (33.15%), Postives = 91/184 (49.46%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKNIIGDRPENADPAYESNYAIST----RWVARDGSGLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDR 540
+LGR+ FN+F P +L V + + N + P + A T +G L W D + P R+ V F+ G++EP EG D+ WR V + K L L E M+K + G + P LG G+L Y M + P GYLDI+YLD++ R+T+G +G++V+VDR
Sbjct: 97 SLGRMSFNMFAPRDLVVTVKKMTNTLAPLPSGESTKHPEGTAAYTVICDLKTNVEGQQLDMVFTSEAVSWPDEADPNRLAVAFTAGTLEPAEGADVKLWRSVFT------SPKKSLRQRLTEPLTMWMMKKMIGLEAPKG-LGADGKLRYSMSKPPAGYLDIMYLDDDFRITKGNRGSVVIVDR 273
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Match: E0UHU9_GLOV7 (PAP fibrillin family protein n=1 Tax=Gloeothece verrucosa (strain PCC 7822) TaxID=497965 RepID=E0UHU9_GLOV7) HSP 1 Score: 105 bits (262), Expect = 1.320e-24 Identity = 60/182 (32.97%), Postives = 100/182 (54.95%), Query Frame = 1
Query: 1 TLGRLVFNIFEPVNLPVLIVSIKNIIGDRPENADPAYESNYAISTRWVARDGSGLRGRVEISGTCWEDPSIPERVLVRFSKGSIEPDEGQDLDAWRKVIGVRDIEGTKDKGLFSTLKEKAARLMLKVVFGFQGPADDLGPR-GELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV 543
TLGRL FN+F+PV L ++I + + P N + + + + ++G V G C +P + V+F+ ++P E Q+LD W+ + + K + KEK +M K++FG P + + P+ GE+S+ M+R PKG LDIIY+DEE+R+TRG++G ++V R+
Sbjct: 80 TLGRLAFNMFQPVKLKLVIDRVLQPVF--PVNNGQQRSHDIIVEFTTIEDNLPEIKGIVHNFGIC--EPKTDSSLQVQFTGSMMKPQEQQNLDVWKSLFNQQSKSSNK------SWKEKVGAVMAKIMFGLV-PPEQMNPKTGEVSFSMRRPPKGSLDIIYVDEELRITRGEKGTVLVCQRL 250 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10871.781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10871.781.1 >prot_Ecto-sp13_S_contig10871.781.1 ID=prot_Ecto-sp13_S_contig10871.781.1|Name=mRNA_Ecto-sp13_S_contig10871.781.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp TLGRLVFNIFEPVNLPVLIVSIKNIIGDRPENADPAYESNYAISTRWVARback to top mRNA from alignment at Ecto-sp13_S_contig10871:1769..2920+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10871.781.1 ID=mRNA_Ecto-sp13_S_contig10871.781.1|Name=mRNA_Ecto-sp13_S_contig10871.781.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1152bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10871:1769..2920+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10871:1769..2920+ >mRNA_Ecto-sp13_S_contig10871.781.1 ID=mRNA_Ecto-sp13_S_contig10871.781.1|Name=mRNA_Ecto-sp13_S_contig10871.781.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10871:1769..2920+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |