mRNA_Ecto-sp13_S_contig10866.776.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10866.776.1
Unique NamemRNA_Ecto-sp13_S_contig10866.776.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: D8LTC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC9_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 6.020e-160
Identity = 268/276 (97.10%), Postives = 273/276 (98.91%), Query Frame = 2
Query:   11 QISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 838
            +ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVN+LSDRDQMQLELANDSVHSSTEKVKGATSNVPVLP GSAATAPG+VVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQA+LDKRRVVGARTHAAAKEREDAADGLDMKE+DTMGGSDSFRETLARA HGK RRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG
Sbjct:   13 KISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPVGSAATAPGVVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQALLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKHRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 288          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A6H5L8Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q7_9PHAE)

HSP 1 Score: 460 bits (1184), Expect = 1.350e-157
Identity = 266/279 (95.34%), Postives = 273/279 (97.85%), Query Frame = 2
Query:    2 AEIQISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 838
            AEIQISEKDYFIRA+EFKVWLCHKK+  FEDLTSDESHELFDKF+KDWNRGKLDPHFYEGRLPDELIARTKKTQH+WGFVN+LSDRDQMQLELANDSVHSSTEKVKGATSNVPVLP GSAATAPG+VV KQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXX EKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKE+DTMGGSDSFRETLARA HGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG
Sbjct:  103 AEIQISEKDYFIRAMEFKVWLCHKKETLFEDLTSDESHELFDKFVKDWNRGKLDPHFYEGRLPDELIARTKKTQHRWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPIGSAATAPGLVVKKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXREKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 381          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A836CIB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.730e-44
Identity = 95/228 (41.67%), Postives = 128/228 (56.14%), Query Frame = 2
Query:    8 IQISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSA------ATAP-----GMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGG 658
            ++++E DYF+R  EF VWL   ++K FE+L+S ++H+ F KF K+WN GKL+P +Y G +P++ +A  KKTQH WGFV +++DRD+  L+ A +S+ + T   K +        A  A      + AP     G   G +  GRGG                             HA  LDEIAPKETGRQA +DKRR VGA  H AA+ERE   DGLD+ E DTMGG
Sbjct:   58 VKLTEDDYFVRVDEFSVWLLDHRRKRFEELSSKDAHKQFAKFCKEWNAGKLEPTYYSGAIPEDKVAAAKKTQHSWGFVKRMTDRDKSTLKAATNSIKTDTAITKASAGGSTACAASHATNMVRPSVAPRGGGEGDTGGSRGHGRGGGLKAV------------------------HAAALDEIAPKETGRQAAIDKRRTVGAAMHGAAREREFQRDGLDLPEQDTMGG 261          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A3F2RY91_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY91_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.040e-41
Identity = 108/284 (38.03%), Postives = 157/284 (55.28%), Query Frame = 2
Query:   14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELF-DKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGS-----DSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKA----GQK-ITIQPRR 832
            ISE DYF+RA EF+VWL   K K+ +DL+++E+ +LF   F++ WNRGKL   FY+G LPD ++ +TK+T+H+WGFV KL ++++  L  A DSV  +T+K         +L +G+ A+       K    R  +                          E    V+DE+APKETGR+A + KRR +G + H AA++RED  DGLD+ E   MGG      D F+  +A+    ++R+Q  +   L GLAAKE  +   F+  MGL      G+K +TI PRR
Sbjct:   67 ISEDDYFLRATEFRVWLTQSKGKYVDDLSTEEATQLFRGDFVRKWNRGKLAEMFYKG-LPDAVLEQTKRTRHRWGFVAKLGEKEKFALATAKDSVDVATKKKD-------LLNSGNGASVKDPPREKTETDRS-NSRRKGREEEDKEETWKRRKVERKKEKEYRDTVMDELAPKETGREAQIQKRRQLGEKLHGAARDREDTRDGLDVSEDFLMGGGRHGGEDDFQRRMAQRDSARRRKQGEQQAKLAGLAAKESARMDKFLEDMGLAGANTNGRKPMTIAPRR 341          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A329RWI0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWI0_9STRA)

HSP 1 Score: 159 bits (401), Expect = 3.370e-41
Identity = 125/282 (44.33%), Postives = 175/282 (62.06%), Query Frame = 2
Query:   14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFD-KFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGG---SDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGL-----KAGQKITIQPRR 832
            I+E+DYF+R  EF+VWL   K K+ +DL++DE+ ELF  +F + WNRGKL   FYEG LPD ++ +TK+T+H+WGFV KL D+++ +L  A DSV  +T+K     S    +        P +    + DG       XXXXXXXXXXXXXXXXXXXXX  E   +V++E+ PK TGR+A ++KRR +G + H AA++REDA DGLD+ +   MGG   SD  +  +A+    ++R+Q  + E L  L AKE  +   F+  MGL       G+ +TI PRR
Sbjct:   48 ITEEDYFLRQTEFRVWLAQTKNKYVDDLSTDEAMELFTVEFARKWNRGKLSKMFYEG-LPDAVVEQTKRTRHQWGFVAKLGDKEKFELATAKDSVDVATKKKSLLISEEKKV------KGPKL----EEDGSRTKRRSXXXXXXXXXXXXXXXXXXXXXEREYRDLVMEELEPKATGREAQIEKRRQLGDKLHGAARDREDARDGLDLSDDFLMGGRGGSDDLKHRMAQRDLVRRRKQEQQQEKLAALKAKESARMDKFLEDMGLAGPNANGGKTMTIAPRR 318          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A662X0P8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0P8_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.520e-40
Identity = 135/285 (47.37%), Postives = 172/285 (60.35%), Query Frame = 2
Query:   14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELF-DKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGR--GGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKT------EHLQGLAAKEEEKRAAFMAQMGL---KAGQKITIQPRR 832
            ISE DYF+RA EF+VWL   K KF +DL+++E+  LF D+F + WNRGKL   FYEG LPD ++ +TK+T+H+WGFV KL +R++  L  A DSV  +T K      ++  + AGS + A G +   Q + +        XXXXXXXXXXXXXXXXXXXXXX E   VVLDE+APK TGR+A L+KRR VG R H AA++REDA DGL++ E   MGG                             E L GLAAKE  +   F+A MGL     G+ +TI PRR
Sbjct:  113 ISEDDYFLRATEFRVWLAQTKGKFVDDLSTEETTALFRDEFARKWNRGKLARMFYEG-LPDAVLEQTKRTRHRWGFVAKLGERERFDLATAKDSVDVATRK-----EDLLNVHAGSTSRARGPMPASQDEAKMKRNAKDEXXXXXXXXXXXXXXXXXXXXXXREDRDVVLDELAPKATGREAQLEKRRQVGQRLHGAARDREDARDGLNLSEDFIMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKLAGLAAKESARMDKFLADMGLAGASGGKPMTIAPRR 391          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A5D6Y8C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C8_9STRA)

HSP 1 Score: 155 bits (392), Expect = 6.380e-40
Identity = 133/289 (46.02%), Postives = 173/289 (59.86%), Query Frame = 2
Query:   11 QISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFD-KFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKG-ATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHA----------VVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDS-FRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKA--GQKITIQPRR 832
            +ISE D+F+RA EF+VWL   K K+ EDLT+ E+  LF  KF+K WNRG+L   FYEG +P+ ++ +T++T+H WGF  +LSD++ MQL  A DSV  +T K    AT   P  P                      XXXXXXXXXXXXXXXXXXXXXXXXXX  HA           VL+E+APKETGR+A L+KRR V  + H AA++RE+  DGLD+ +A  MGGS S  +  L      + RRQ  + + L    AKE  +   F+  MG+ A  G+ ITI PR+
Sbjct:   28 EISEDDFFLRATEFRVWLAQTKNKYVEDLTTQEASALFQRKFVKKWNRGRLARMFYEG-IPEHVLEQTRRTKHTWGFAARLSDKEAMQLASARDSVGVATRKTDLLATPRAPAAPEPEPLERSSRTHHDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHADRKRHRQHRESVLEELAPKETGREAALEKRRQVAGKLHGAARDREENRDGLDVSDAFLMGGSGSDLQHRLQAREQARDRRQQEQQDKLDEFKAKEAARMDKFLQDMGISATAGKPITIAPRK 315          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A6A3DRB7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DRB7_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.990e-37
Identity = 119/287 (41.46%), Postives = 178/287 (62.02%), Query Frame = 2
Query:   11 QISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELF-DKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHA--VVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGS-----DSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGL-----KAGQKITIQPRR 832
            +++++DYF+R  EF++WL   K K+ +DL+++E+ +LF D+F K WNRGKL   FYEG LP+ ++ +TK+T+H+WGFV KL ++++ +L  A DSV  +T+K         +L +G    + G V     + +      XXXXXXXXXXXXXXXXXXXXXXXE+     +++E+APK TGR+A ++KRR +G + H +AK+RED  DGLD  +   MGG      D  +  +A+    ++R+Q  + E L  L AKE  +   F+  MGL       G+ + I PRR
Sbjct:   57 KVTDEDYFLRQTEFRLWLAQSKGKYVDDLSTEEATKLFTDEFAKKWNRGKLSKMFYEG-LPESVVEQTKRTRHRWGFVAKLGEKEKFELATAKDSVGVATKKEN-------LLSSGRTRESIGNVSASFEESKSKPDRRXXXXXXXXXXXXXXXXXXXXXXXEREYRDTMMEELAPKATGREAQIEKRRQLGDKLHGSAKDREDTRDGLDFSDDFLMGGGRGAGGDDLKRRIAQRDSARRRKQDERQEKLAELKAKESARMDKFLEGMGLAGPNANGGKPMIIPPRR 335          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A485KJU9_9STRA (Aste57867_8246 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJU9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.040e-37
Identity = 101/278 (36.33%), Postives = 154/278 (55.40%), Query Frame = 2
Query:    5 EIQISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHA-VVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPRR 832
            ++QISE DYF +A+EF+VWL  +K+ +F+DLTS ++   F KF+  WN GKLD  +Y  ++P  ++   ++T+HKWG   K+++ ++++L    D+V  ST K           P  S AT+      K+ D              XXXXX             KH  +VL+E+APK TGR+A ++K+R V A  H AA++ EDA DGL + +A  MGGSD F+  + R  H + RR   + + +      E  +   F+A MG++ GQ +ITI PR+
Sbjct:   45 DVQISEDDYFEKALEFRVWLKLEKRLYFDDLTSADAQGYFGKFVHKWNGGKLDSMYYT-KIPQHILEGIQRTKHKWGL--KMNETERLELASTKDTVDISTNKGTNHPPPYKSHPQTSKATSASFASKKRDD-----------DSDXXXXXERKRAKRDKKTYVKHKEMVLEELAPKATGREATIEKKRQVAASVHGAARQNEDAKDGLTLSDAFLMGGSDDFQARVQRRKHAQDRRVEEQQQRVTAAQEAEAARMQKFLADMGIQPGQERITIAPRK 308          
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A067BZG8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZG8_SAPPC)

HSP 1 Score: 147 bits (372), Expect = 2.800e-37
Identity = 109/275 (39.64%), Postives = 158/275 (57.45%), Query Frame = 2
Query:   11 QISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHA-VVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPR 829
            +IS  DYF +A EF+VWL  +KK++FEDLTSD++ + FDKF + WN GKLD  +Y   +P  ++    +T+HKWGF+  L++ +++ L    D+V  +T K  GA+S+    P  S AT+P     +Q              XXXXXXXXXXX         KH  +V++E+APK TGR A ++K+R   A  H AA+ +EDA DGLD+ +   MGGSD F   + R    + +RQ  K + +      E  +   F+  MG++ GQ +ITI PR
Sbjct:   36 RISRDDYFEKAREFRVWLKTEKKRYFEDLTSDDAMQYFDKFARRWNDGKLDAMYYAS-IPQHILESVNRTKHKWGFLKNLNESERLHLASTKDTVDITTNK-SGASSST-ARP--SKATSPPRSSKQQXX------------XXXXXXXXXXXDKYERKRYHKHKELVMEELAPKATGRDATVEKKREKAATLHGAARAKEDAKDGLDLSDDFLMGGSDDFHARIQRRKAAQDKRQDEKQQRVTAAQEAEAARMQKFLQDMGIQPGQDRITIAPR 293          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTC9_ECTSI6.020e-16097.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8Q7_9PHAE1.350e-15795.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CIB7_9STRA2.730e-4441.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3F2RY91_9STRA3.040e-4138.03Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A329RWI0_9STRA3.370e-4144.33Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A662X0P8_9STRA3.520e-4047.37Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A5D6Y8C8_9STRA6.380e-4046.02Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3DRB7_9STRA1.990e-3741.46Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A485KJU9_9STRA2.040e-3736.33Aste57867_8246 protein n=1 Tax=Aphanomyces stellat... [more]
A0A067BZG8_SAPPC2.800e-3739.64Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10866contigEcto-sp13_S_contig10866:786..4328 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score295.8
Seed ortholog evalue1.4e-77
Seed eggNOG ortholog2880.D8LTC9
Model size1399
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0007275,GO:0008150,GO:0009791,GO:0009908,GO:0009966,GO:0010646,GO:0010928,GO:0022414,GO:0023051,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048467,GO:0048479,GO:0048480,GO:0048519,GO:0048523,GO:0048583,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0051302,GO:0051782,GO:0061458,GO:0065007,GO:0090567,GO:0099402
Exons6
EggNOG OGs2BY93@1,2S2GY@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_006090.1
Cds size576
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10866.776.1prot_Ecto-sp13_S_contig10866.776.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10866 1344..2867 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462560.1203063-UTR-Ecto-sp13_S_contig10866:785..13431681462560.1203063-UTR-Ecto-sp13_S_contig10866:785..1343Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10866 786..1343 -
1681462560.1808794-UTR-Ecto-sp13_S_contig10866:2867..28981681462560.1808794-UTR-Ecto-sp13_S_contig10866:2867..2898Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10866 2868..2898 -
1681462560.1887438-UTR-Ecto-sp13_S_contig10866:3480..35641681462560.1887438-UTR-Ecto-sp13_S_contig10866:3480..3564Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10866 3481..3564 -
1681462560.196828-UTR-Ecto-sp13_S_contig10866:4178..43281681462560.196828-UTR-Ecto-sp13_S_contig10866:4178..4328Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10866 4179..4328 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462560.1365764-CDS-Ecto-sp13_S_contig10866:1343..14571681462560.1365764-CDS-Ecto-sp13_S_contig10866:1343..1457Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10866 1344..1457 -
1681462560.146536-CDS-Ecto-sp13_S_contig10866:1808..19791681462560.146536-CDS-Ecto-sp13_S_contig10866:1808..1979Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10866 1809..1979 -
1681462560.1576831-CDS-Ecto-sp13_S_contig10866:2302..25451681462560.1576831-CDS-Ecto-sp13_S_contig10866:2302..2545Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10866 2303..2545 -
1681462560.1720533-CDS-Ecto-sp13_S_contig10866:2819..28671681462560.1720533-CDS-Ecto-sp13_S_contig10866:2819..2867Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10866 2820..2867 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10866.776.1

>prot_Ecto-sp13_S_contig10866.776.1 ID=prot_Ecto-sp13_S_contig10866.776.1|Name=mRNA_Ecto-sp13_S_contig10866.776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp
MQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGD
GDGRGGGGGSGSGRRTEAKRQRRQEREKHAVVLDEIAPKETGRQAVLDKR
RVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQ
MAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG*
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mRNA from alignment at Ecto-sp13_S_contig10866:786..4328-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10866.776.1 ID=mRNA_Ecto-sp13_S_contig10866.776.1|Name=mRNA_Ecto-sp13_S_contig10866.776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10866:786..4328- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCCGAAATCCAGATCAGCGAGAAGGACTACTTCATCCGCGCGGTGGAGT TCAAGGTGTGGCTCTGCCACAAGAAGAAGAAGTTCTTCGAGGATCTCACC TCAGACGAGTCGCACGAGCTCTTCGACAAATTCATCAAGGACTGGAACAG GTATATAGCTACATAGCTCACGTGCGTTTCGGGCCGCCCGGCTCAGCTAT TAGCAAGAGGTTGTGGCAAAGGGGGCCTGAAGGGGGTGTGGTGTGGACAT GCTGCTTTTGCGGCTGCTGTGCCGAAGATGTTTGGTTGAAGGGACACATT TTTTTTTTTTTCACGATAAGAACCATTTATAGCTAGATTCTCAAACTGCC GTTCTCTGGTGTTGCGTGTAATCCCTCACTGGCGCTGTGCCAAAGACCAT TGCTCATAGTGCCACCCTTGGTACGGCACCTGAAAACGCTAGTCTCCGAA TGCTCCAATATCCGAGCATACCACCCACTCGATTCCTCGTGCCATCGCCC TTAGTCGTTCTTACCTGCATGCACCGTCGTTTCTCTTTTTGATGCTGCTA TTAATACTGGATGTCGGTGCTACTTTTGCTGATACTCATGCCGCAAGGGG CGTTGAGACTCTCGAGATGACGATGATGACCCGGCCTGAAATTTCGGCGT GTGCCCTCGCCACCCGCCTGCCCCCCATATGCAAGTCTGCACACAAACAA CTCACCCTCTTTTTTTATTTTTATGTTTTCCCTCCCTTCGTTTTTTCTCG GCTTGTCCAAAAAGGGGAAAGCTCGACCCCCACTTCTACGAGGGTCGCCT CCCCGACGAACTGATTGCCCGGACAAAGAAAACGCAGCACAAATGGGGGT GAGCGCTTTCTTCTTCTAGACAGAACGGTCCTCGTAAGGACGCAACAAGA ATTGATGCACGTATATTTTTTTTTGCACAGAGGGATTGATGGTTGTGTGC GAGTCTTCATGTCGCCTGTGCTCTTCTACACCACCATGAAAAATTCACCG ACGATCTCTTCGAGGACCAGCACGGTTGCCCCAGGCACGCTTCGTTGCCG AATAAGCGGCGCAGCGCTACCGGTGTGTTGTACAACCAGCGGCTTTTGCT TGTGCGTTGCCCTCGGCACGAAGAAGAAAGAACGAGACCTGCTTTGTGTC GGCTTTCTCTCGGCTGAGCGAGGCAGTCCGAGAGTCATGTCCTGCTGCAG AACTTTCCGGCAGCGCAAAAGGGGCAGGGGGGGGGGGGGGCTTCCCTCGT TTCCGCATGGAGCAACGCCGCTAGGCCTTAAGATCGACAAACGCGTTTTG TGTCAATGGCCGAGCGGTCTTGTCAAGCGGTCCACCGAGCTCTTACCCTC ACCCCCCCCCCCCCCCCCCCCCTGCCTACATGTTCCGTGCGGCTGCGTTG TTCGGGCTGCTGGGCCCCTTCCGCGGACAGGTTTGTGAACAAGTTGAGCG ACCGGGATCAGATGCAGCTGGAGCTAGCCAATGACTCAGTCCACTCCAGC ACGGAGAAGGTGAGCGAGGGAACCACGACTAACGTTGATGGGAAGGAAAC GCTTTTTTTTTCTTCTCTCCTTCTAGGTCTGTGAGAGCGTTACATCTTCG AAAAAGGATTCAAGGATCCACACGCAACACAAGGGTTGTTAGCGTGTGGT GGTTCCGCGTGTTTCAATCTTGACCTTCCCCGCCTCAATTCGGAAAAGTA TGACACCGCCTGTATTAAACCGCTGCGTCAAATTACATACAGGAGCAACC ACGCTTCGAAAAATTTCAACGAACCAATCGCAGGTCAAAGGGGCCACCAG CAACGTCCCTGTCCTACCGGCCGGGTCGGCCGCAACAGCTCCGGGGATGG TGGTGGGGAAGCAGGCCGACGGCCGTGGCGGGGACGGGGACGGTAGAGGC GGCGGCGGCGGGAGCGGGAGCGGGCGCAGGACGGAGGCGAAGCGGCAGCG GCGGCAAGAGCGGGAGAAGCACGCGGTCGTCCTCGACGAGATCGCTCCGA AGGAGACGGGCCGACAAGCGGTGTTGGTGAGACAATTGAGCATATGCTGG CGCGTGTGGTGGTGACGATGTTGATGTCCCCCCCGGAGCCTGCTGGAGGA AGGACACACACGTGACAGCTCATGGTGGCATACGACGCACGGCCGCCGCA CGTTGACGATGTCGGCCGCCAGCAAGAGAAACGGCAGCAAAGATGATTCG GACGATTCGATTCTGCAGGCATCACCGCCTGTGGGGAAAGTACACACATG ACAACCCCCCCGCGGCGGTGTTGCTTTTGCTCTATAGTCTCGCCGTCGTG ACTCACCCGCCTTTGCTGTGTTGTGTTTTGTCTCTCTTCTCGCCCTAAGG ACAAGCGCCGCGTGGTCGGCGCAAGAACACACGCTGCGGCGAAGGAGAGG GAGGACGCCGCGGACGGCTTGGACATGAAGGAGGCGGACACCATGGGCGG GTCGGATAGCTTCCGCGAGACCCTCGCGCGAGCCCATCACGGGAAGCAGC GGCGACAGATGGCAAAGACGGTGCGCGAGAGCGGCGTGTTTGTGTTTAAG GCTCTTCTCGTGTCTTCGTTTTGTCCGCCACGACACGCTGTGTTGATTTT TGCAGACATCATCGAGCTCGAAAGCCATCGCACGCGCACGCAACCACGGT TCGTTCGAAGCGAGCGCGGTATTCGATTTTCTCTGGTGTACGAAAGAGCA GCAGGGCACGATGCAACCCTGTTGTTTGTCTTGCTACAAAGCTTAGGCTT CGCGGAGACCTATATTGTGCTGCGCATGCTCCCTCGCCAAGTCCCAGGCC AATTCAATCTATCTTTGTTGTCTGCCTCGATCCCTCCCCGCCGTCTATTT TCGCGGTGACGCCGGTACCAGGAGCACCTGCAGGGACTAGCCGCGAAGGA AGAGGAGAAACGCGCGGCTTTCATGGCGCAGATGGGCCTGAAAGCCGGCC AGAAAATTACGATTCAGCCTCGCAGAGACGGGTAACGAGGAAGAGAGGAC GGGGATTCTTGGTTGTGTAGCCTTCGTAGAAATAAATGCTCTAGGAAAGG GTTTCTCGTTCAATGCCCAGATCGCGACATTTGAGCGTGCAAGAGAAAAA TATGCTGTGGCGATCGTGTATGCGGGTGCAATCGTTTATGTGCCGTAGCC GGGTTCGTTCGTTCCCGTCGGTGAAACTGCTCCGAAAAGCAATCGTGATT TTCATTTGTCGTTTGTTTCGATCCTTCCTTTCGGGTGCAATCGCTCGCCG TTTCTCTGCGTACGTATGTAGACCACACGGCGCCGTTGCCGATATCACGT TGTGGAGGTCTCCGAGATCCGGGGCCATTGAACAAGGGAGACCAACTTGG TTATCGATCCCTGCTCTAACAAGTCTTGACGGCTGCATGCGGTGGTTCTC GTGCGTGCTCGGTGGTTTCATGTCTAATGCTCTCGCCGACATCGCTTTCA GTCCTTGCAGACCCACGACAACGCAGACACAGCAGTGACAACTGATGTCA CCCACGCTCCCCTGCGGGCTCCTTTTTCTTCGAAACGAATGCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10866:786..4328-

>mRNA_Ecto-sp13_S_contig10866.776.1 ID=mRNA_Ecto-sp13_S_contig10866.776.1|Name=mRNA_Ecto-sp13_S_contig10866.776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=576bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10866:786..4328- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGCTGGAGCTAGCCAATGACTCAGTCCACTCCAGCACGGAGAAGGT
CAAAGGGGCCACCAGCAACGTCCCTGTCCTACCGGCCGGGTCGGCCGCAA
CAGCTCCGGGGATGGTGGTGGGGAAGCAGGCCGACGGCCGTGGCGGGGAC
GGGGACGGTAGAGGCGGCGGCGGCGGGAGCGGGAGCGGGCGCAGGACGGA
GGCGAAGCGGCAGCGGCGGCAAGAGCGGGAGAAGCACGCGGTCGTCCTCG
ACGAGATCGCTCCGAAGGAGACGGGCCGACAAGCGGTGTTGGACAAGCGC
CGCGTGGTCGGCGCAAGAACACACGCTGCGGCGAAGGAGAGGGAGGACGC
CGCGGACGGCTTGGACATGAAGGAGGCGGACACCATGGGCGGGTCGGATA
GCTTCCGCGAGACCCTCGCGCGAGCCCATCACGGGAAGCAGCGGCGACAG
ATGGCAAAGACGGAGCACCTGCAGGGACTAGCCGCGAAGGAAGAGGAGAA
ACGCGCGGCTTTCATGGCGCAGATGGGCCTGAAAGCCGGCCAGAAAATTA
CGATTCAGCCTCGCAGAGACGGGTAA
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