mRNA_Ecto-sp13_S_contig10866.776.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: D8LTC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC9_ECTSI) HSP 1 Score: 462 bits (1190), Expect = 6.020e-160 Identity = 268/276 (97.10%), Postives = 273/276 (98.91%), Query Frame = 2
Query: 11 QISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 838
+ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVN+LSDRDQMQLELANDSVHSSTEKVKGATSNVPVLP GSAATAPG+VVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQA+LDKRRVVGARTHAAAKEREDAADGLDMKE+DTMGGSDSFRETLARA HGK RRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG
Sbjct: 13 KISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPVGSAATAPGVVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQALLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKHRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 288
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A6H5L8Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q7_9PHAE) HSP 1 Score: 460 bits (1184), Expect = 1.350e-157 Identity = 266/279 (95.34%), Postives = 273/279 (97.85%), Query Frame = 2
Query: 2 AEIQISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 838
AEIQISEKDYFIRA+EFKVWLCHKK+ FEDLTSDESHELFDKF+KDWNRGKLDPHFYEGRLPDELIARTKKTQH+WGFVN+LSDRDQMQLELANDSVHSSTEKVKGATSNVPVLP GSAATAPG+VV KQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXX EKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKE+DTMGGSDSFRETLARA HGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG
Sbjct: 103 AEIQISEKDYFIRAMEFKVWLCHKKETLFEDLTSDESHELFDKFVKDWNRGKLDPHFYEGRLPDELIARTKKTQHRWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPIGSAATAPGLVVKKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXREKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 381
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A836CIB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB7_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.730e-44 Identity = 95/228 (41.67%), Postives = 128/228 (56.14%), Query Frame = 2
Query: 8 IQISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSA------ATAP-----GMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGG 658
++++E DYF+R EF VWL ++K FE+L+S ++H+ F KF K+WN GKL+P +Y G +P++ +A KKTQH WGFV +++DRD+ L+ A +S+ + T K + A A + AP G G + GRGG HA LDEIAPKETGRQA +DKRR VGA H AA+ERE DGLD+ E DTMGG
Sbjct: 58 VKLTEDDYFVRVDEFSVWLLDHRRKRFEELSSKDAHKQFAKFCKEWNAGKLEPTYYSGAIPEDKVAAAKKTQHSWGFVKRMTDRDKSTLKAATNSIKTDTAITKASAGGSTACAASHATNMVRPSVAPRGGGEGDTGGSRGHGRGGGLKAV------------------------HAAALDEIAPKETGRQAAIDKRRTVGAAMHGAAREREFQRDGLDLPEQDTMGG 261
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A3F2RY91_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY91_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.040e-41 Identity = 108/284 (38.03%), Postives = 157/284 (55.28%), Query Frame = 2
Query: 14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELF-DKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGS-----DSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKA----GQK-ITIQPRR 832
ISE DYF+RA EF+VWL K K+ +DL+++E+ +LF F++ WNRGKL FY+G LPD ++ +TK+T+H+WGFV KL ++++ L A DSV +T+K +L +G+ A+ K R + E V+DE+APKETGR+A + KRR +G + H AA++RED DGLD+ E MGG D F+ +A+ ++R+Q + L GLAAKE + F+ MGL G+K +TI PRR
Sbjct: 67 ISEDDYFLRATEFRVWLTQSKGKYVDDLSTEEATQLFRGDFVRKWNRGKLAEMFYKG-LPDAVLEQTKRTRHRWGFVAKLGEKEKFALATAKDSVDVATKKKD-------LLNSGNGASVKDPPREKTETDRS-NSRRKGREEEDKEETWKRRKVERKKEKEYRDTVMDELAPKETGREAQIQKRRQLGEKLHGAARDREDTRDGLDVSEDFLMGGGRHGGEDDFQRRMAQRDSARRRKQGEQQAKLAGLAAKESARMDKFLEDMGLAGANTNGRKPMTIAPRR 341
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A329RWI0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWI0_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.370e-41 Identity = 125/282 (44.33%), Postives = 175/282 (62.06%), Query Frame = 2
Query: 14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFD-KFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGG---SDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGL-----KAGQKITIQPRR 832
I+E+DYF+R EF+VWL K K+ +DL++DE+ ELF +F + WNRGKL FYEG LPD ++ +TK+T+H+WGFV KL D+++ +L A DSV +T+K S + P + + DG XXXXXXXXXXXXXXXXXXXXX E +V++E+ PK TGR+A ++KRR +G + H AA++REDA DGLD+ + MGG SD + +A+ ++R+Q + E L L AKE + F+ MGL G+ +TI PRR
Sbjct: 48 ITEEDYFLRQTEFRVWLAQTKNKYVDDLSTDEAMELFTVEFARKWNRGKLSKMFYEG-LPDAVVEQTKRTRHQWGFVAKLGDKEKFELATAKDSVDVATKKKSLLISEEKKV------KGPKL----EEDGSRTKRRSXXXXXXXXXXXXXXXXXXXXXEREYRDLVMEELEPKATGREAQIEKRRQLGDKLHGAARDREDARDGLDLSDDFLMGGRGGSDDLKHRMAQRDLVRRRKQEQQQEKLAALKAKESARMDKFLEDMGLAGPNANGGKTMTIAPRR 318
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A662X0P8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0P8_9STRA) HSP 1 Score: 158 bits (399), Expect = 3.520e-40 Identity = 135/285 (47.37%), Postives = 172/285 (60.35%), Query Frame = 2
Query: 14 ISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELF-DKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGR--GGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKT------EHLQGLAAKEEEKRAAFMAQMGL---KAGQKITIQPRR 832
ISE DYF+RA EF+VWL K KF +DL+++E+ LF D+F + WNRGKL FYEG LPD ++ +TK+T+H+WGFV KL +R++ L A DSV +T K ++ + AGS + A G + Q + + XXXXXXXXXXXXXXXXXXXXXX E VVLDE+APK TGR+A L+KRR VG R H AA++REDA DGL++ E MGG E L GLAAKE + F+A MGL G+ +TI PRR
Sbjct: 113 ISEDDYFLRATEFRVWLAQTKGKFVDDLSTEETTALFRDEFARKWNRGKLARMFYEG-LPDAVLEQTKRTRHRWGFVAKLGERERFDLATAKDSVDVATRK-----EDLLNVHAGSTSRARGPMPASQDEAKMKRNAKDEXXXXXXXXXXXXXXXXXXXXXXREDRDVVLDELAPKATGREAQLEKRRQVGQRLHGAARDREDARDGLNLSEDFIMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKLAGLAAKESARMDKFLADMGLAGASGGKPMTIAPRR 391
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A5D6Y8C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C8_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.380e-40 Identity = 133/289 (46.02%), Postives = 173/289 (59.86%), Query Frame = 2
Query: 11 QISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFD-KFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKG-ATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHA----------VVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDS-FRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKA--GQKITIQPRR 832
+ISE D+F+RA EF+VWL K K+ EDLT+ E+ LF KF+K WNRG+L FYEG +P+ ++ +T++T+H WGF +LSD++ MQL A DSV +T K AT P P XXXXXXXXXXXXXXXXXXXXXXXXXX HA VL+E+APKETGR+A L+KRR V + H AA++RE+ DGLD+ +A MGGS S + L + RRQ + + L AKE + F+ MG+ A G+ ITI PR+
Sbjct: 28 EISEDDFFLRATEFRVWLAQTKNKYVEDLTTQEASALFQRKFVKKWNRGRLARMFYEG-IPEHVLEQTRRTKHTWGFAARLSDKEAMQLASARDSVGVATRKTDLLATPRAPAAPEPEPLERSSRTHHDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHADRKRHRQHRESVLEELAPKETGREAALEKRRQVAGKLHGAARDREENRDGLDVSDAFLMGGSGSDLQHRLQAREQARDRRQQEQQDKLDEFKAKEAARMDKFLQDMGISATAGKPITIAPRK 315
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A6A3DRB7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DRB7_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.990e-37 Identity = 119/287 (41.46%), Postives = 178/287 (62.02%), Query Frame = 2
Query: 11 QISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELF-DKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHA--VVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGS-----DSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGL-----KAGQKITIQPRR 832
+++++DYF+R EF++WL K K+ +DL+++E+ +LF D+F K WNRGKL FYEG LP+ ++ +TK+T+H+WGFV KL ++++ +L A DSV +T+K +L +G + G V + + XXXXXXXXXXXXXXXXXXXXXXXE+ +++E+APK TGR+A ++KRR +G + H +AK+RED DGLD + MGG D + +A+ ++R+Q + E L L AKE + F+ MGL G+ + I PRR
Sbjct: 57 KVTDEDYFLRQTEFRLWLAQSKGKYVDDLSTEEATKLFTDEFAKKWNRGKLSKMFYEG-LPESVVEQTKRTRHRWGFVAKLGEKEKFELATAKDSVGVATKKEN-------LLSSGRTRESIGNVSASFEESKSKPDRRXXXXXXXXXXXXXXXXXXXXXXXEREYRDTMMEELAPKATGREAQIEKRRQLGDKLHGSAKDREDTRDGLDFSDDFLMGGGRGAGGDDLKRRIAQRDSARRRKQDERQEKLAELKAKESARMDKFLEGMGLAGPNANGGKPMIIPPRR 335
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A485KJU9_9STRA (Aste57867_8246 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJU9_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.040e-37 Identity = 101/278 (36.33%), Postives = 154/278 (55.40%), Query Frame = 2
Query: 5 EIQISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHA-VVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPRR 832
++QISE DYF +A+EF+VWL +K+ +F+DLTS ++ F KF+ WN GKLD +Y ++P ++ ++T+HKWG K+++ ++++L D+V ST K P S AT+ K+ D XXXXX KH +VL+E+APK TGR+A ++K+R V A H AA++ EDA DGL + +A MGGSD F+ + R H + RR + + + E + F+A MG++ GQ +ITI PR+
Sbjct: 45 DVQISEDDYFEKALEFRVWLKLEKRLYFDDLTSADAQGYFGKFVHKWNGGKLDSMYYT-KIPQHILEGIQRTKHKWGL--KMNETERLELASTKDTVDISTNKGTNHPPPYKSHPQTSKATSASFASKKRDD-----------DSDXXXXXERKRAKRDKKTYVKHKEMVLEELAPKATGREATIEKKRQVAASVHGAARQNEDAKDGLTLSDAFLMGGSDDFQARVQRRKHAQDRRVEEQQQRVTAAQEAEAARMQKFLADMGIQPGQERITIAPRK 308
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Match: A0A067BZG8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZG8_SAPPC) HSP 1 Score: 147 bits (372), Expect = 2.800e-37 Identity = 109/275 (39.64%), Postives = 158/275 (57.45%), Query Frame = 2
Query: 11 QISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNKLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHA-VVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKEADTMGGSDSFRETLARAHHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQ-KITIQPR 829
+IS DYF +A EF+VWL +KK++FEDLTSD++ + FDKF + WN GKLD +Y +P ++ +T+HKWGF+ L++ +++ L D+V +T K GA+S+ P S AT+P +Q XXXXXXXXXXX KH +V++E+APK TGR A ++K+R A H AA+ +EDA DGLD+ + MGGSD F + R + +RQ K + + E + F+ MG++ GQ +ITI PR
Sbjct: 36 RISRDDYFEKAREFRVWLKTEKKRYFEDLTSDDAMQYFDKFARRWNDGKLDAMYYAS-IPQHILESVNRTKHKWGFLKNLNESERLHLASTKDTVDITTNK-SGASSST-ARP--SKATSPPRSSKQQXX------------XXXXXXXXXXXDKYERKRYHKHKELVMEELAPKATGRDATVEKKREKAATLHGAARAKEDAKDGLDLSDDFLMGGSDDFHARIQRRKAAQDKRQDEKQQRVTAAQEAEAARMQKFLQDMGIQPGQDRITIAPR 293 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10866.776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10866.776.1 >prot_Ecto-sp13_S_contig10866.776.1 ID=prot_Ecto-sp13_S_contig10866.776.1|Name=mRNA_Ecto-sp13_S_contig10866.776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp MQLELANDSVHSSTEKVKGATSNVPVLPAGSAATAPGMVVGKQADGRGGDback to top mRNA from alignment at Ecto-sp13_S_contig10866:786..4328- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10866.776.1 ID=mRNA_Ecto-sp13_S_contig10866.776.1|Name=mRNA_Ecto-sp13_S_contig10866.776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10866:786..4328- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10866:786..4328- >mRNA_Ecto-sp13_S_contig10866.776.1 ID=mRNA_Ecto-sp13_S_contig10866.776.1|Name=mRNA_Ecto-sp13_S_contig10866.776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=576bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10866:786..4328- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |