mRNA_Ecto-sp13_S_contig10865.774.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10865.774.1
Unique NamemRNA_Ecto-sp13_S_contig10865.774.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: A0A6H5JMT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT0_9PHAE)

HSP 1 Score: 757 bits (1954), Expect = 2.300e-271
Identity = 432/480 (90.00%), Postives = 441/480 (91.88%), Query Frame = 1 
Query:    1 RSGPAAATVGSGIGSVRANGERDSASVTSASLRSLQAVLMINDASASPGGAPASKAADNVYGHLDPPAVAAATPTAGGGTQIVDGTRSGAGGCCGRGKALLTTGVSQPTVNPTWPVSEASWLHADAQVEDLDGTRLLLLRVFAVDPDSASARDPSHPRQSPAPPPAQALGHGGVDAAARAGDGTATLGPVVWECTIDVKGLTALPVGSRLSHLWALPADCLLVEMYNGGLYAADWVVQALSSNSALPEAVAGGRARAGXXXXXXXXXXXXXXXXX-DQEPLDEVLRRVLVLEAEAERGRVELAAQLEKAAPGDRKHCAAAESACAMDTLRLELTNQQELLEAEEASFFREKRYLEVETLAVEELLQGIAEAEEAAIEDGRQLESEKRETFKSHVLLEARRARLTAELQAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRY-VRDEV 1434
            RSGPAAA VGSGIGS RANGERDSASVT+ASLRSLQAVLM+NDASASP GA AS+A D VYGH DPP VAA TP AGGGT  VDG  +GAGG CGRGK LLTT VSQPTVNPTWPV EASWLHADAQVEDLDGTRLLLLRVFAVDPDSASARDPS PRQSPAPPPAQA GH  VDAAARA DGTATLGPVVWECTIDVKGLTALPVGSRLSHLWALPADCLLVEM NGGLYAADWVVQALSSNSALPEAVAGGR R  XXXXXX      XXXXX DQEPLDE+LRRVLVLEAEAERGRVELAAQLEKAAPGDRKHCAAAESACAMDTLRLEL+NQQELLEAEEASF REKRYLE ETLAVEELL+GIAEAEEAAIEDGRQLESE+RETFKSHVLLEARRARLTAELQAIYPIKYQG+LKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASR  VRD V
Sbjct:   35 RSGPAAAAVGSGIGSGRANGERDSASVTNASLRSLQAVLMMNDASASPAGASASEATDGVYGHHDPPVVAATTPIAGGGTWAVDGATTGAGGFCGRGKVLLTTEVSQPTVNPTWPVPEASWLHADAQVEDLDGTRLLLLRVFAVDPDSASARDPSPPRQSPAPPPAQASGHTAVDAAARARDGTATLGPVVWECTIDVKGLTALPVGSRLSHLWALPADCLLVEMSNGGLYAADWVVQALSSNSALPEAVAGGRTRGXXXXXXXAWRDDSXXXXXXDQEPLDEMLRRVLVLEAEAERGRVELAAQLEKAAPGDRKHCAAAESACAMDTLRLELSNQQELLEAEEASFLREKRYLEAETLAVEELLKGIAEAEEAAIEDGRQLESEQRETFKSHVLLEARRARLTAELQAIYPIKYQGSLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRSAVRDNV 514
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: D7FL65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL65_ECTSI)

HSP 1 Score: 583 bits (1504), Expect = 1.320e-205
Identity = 342/371 (92.18%), Postives = 345/371 (92.99%), Query Frame = 1 
Query:    1 RSGPAAATVGSGIGSVRANGERDSASVTSASLRSLQAVLMINDASASPGGAPASKAADNVYGHLDPPAVAAATPTAGGGTQIVDGTRSGAGGCCGRGKALLTTGVSQPTVNPTWPVSEASWLHADAQVEDLDGTRLLLLRVFAVDPDSASARDPSHPRQSPAPPPAQALGHGGVDAAARAGDGTATLGPVVWECTIDVKGLTALPVGSRLSHLWALPADCLLVEMYNGGLYAADWVVQALSSNSALPEAVAGGRARAGXXXXXXXXXXXXXXXXXDQEPLDEVLRRVLVLEAEAERGRVELAAQLEKAAPGDRKHCAAAESACAMDTLRLELTNQQELLEAEEASFFREKRYLEVETLAVEELLQGIAEAE 1113
            RSGPAAA VGSGIGS RANGERDSASVTSASLRSL+AVL +NDASASPGGA ASKAAD VYGH DPPAVAAAT T   GT+ VDG   GAGG CGRGKALLTTGVSQPTVNPTWPVSEASWLHADAQ EDLDGTRLLLLRVFAVDPDSASARDPSHPRQSPAPPPAQA GH GVDAAARAGDGTATLGPVVWECTIDVKGLTALPVGSRLSHLWALPADCLLVEM NGGLYAADWVVQALSSNSALPEAVAGGRAR  XXXXXXXXXXXXXXXXXDQEPLDEVLRRVLVLEAEAERGRVELAAQLEKAAPGDRK CAAAESACAMDTLRLELT QQELLEAEEASF REKRYLE ETLAVEELL GIAEAE
Sbjct:   35 RSGPAAAAVGSGIGSGRANGERDSASVTSASLRSLRAVLTMNDASASPGGASASKAADGVYGHHDPPAVAAATXTXXXGTRAVDGATRGAGGFCGRGKALLTTGVSQPTVNPTWPVSEASWLHADAQAEDLDGTRLLLLRVFAVDPDSASARDPSHPRQSPAPPPAQASGHSGVDAAARAGDGTATLGPVVWECTIDVKGLTALPVGSRLSHLWALPADCLLVEMSNGGLYAADWVVQALSSNSALPEAVAGGRARGXXXXXXXXXXXXXXXXXXDQEPLDEVLRRVLVLEAEAERGRVELAAQLEKAAPGDRKVCAAAESACAMDTLRLELTIQQELLEAEEASFLREKRYLEAETLAVEELLTGIAEAE 405
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: D7FL64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL64_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 1.680e-34
Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 1 
Query: 1219 QAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRY-VRDEV 1434
            QAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASR  VRD V
Sbjct:    3 QAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRSAVRDNV 75
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: A0A7R9U751_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U751_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.550e-22
Identity = 75/151 (49.67%), Postives = 102/151 (67.55%), Query Frame = 1 
Query:  991 ELTNQQELLEAEEASFFREKRYLEVETLAVEELLQGIAEAEEAAIEDGRQLESEKRET--FKSHVLLEARRARLTAELQAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRY-VRDEV 1434
            +L  ++++L AEEA+  R+       T  V EL+Q IA+  E+A  +  + ++E  ET   ++  LLEAR+ RL AELQ+IYP++   N KE+ IRGLELP DL   DDE ISSALGY AHLV ML+KYL + LRYQ++Y +SR  +RDEV
Sbjct:  321 DLKREEDMLAAEEAALRRD-------TGEVRELIQRIAQ--ESADLEKLEEDAEAAETTYLRTSFLLEARQTRLLAELQSIYPLQLMPN-KEWAIRGLELPKDLSGKDDEHISSALGYAAHLVLMLSKYLAVPLRYQILYYSSRSAIRDEV 461
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: A0A7S1XLF7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLF7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 6.280e-21
Identity = 53/90 (58.89%), Postives = 71/90 (78.89%), Query Frame = 1 
Query: 1168 KSHVLLEARRARLTAELQAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRY-VRDEV 1434
            ++  LLEAR+ RL AELQ+IYP++   N +E+ IRGLELP ++ S DDE +SSALGYTAHLV ML+KYL + LRYQ+++ +SR  +RDEV
Sbjct:   27 RTQFLLEARQTRLLAELQSIYPLQLLPN-REWAIRGLELPREMLSKDDEHVSSALGYTAHLVLMLSKYLGVPLRYQILFYSSRSAIRDEV 115
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: A0A7S3HCI1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCI1_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.460e-18
Identity = 50/99 (50.51%), Postives = 76/99 (76.77%), Query Frame = 1 
Query: 1141 LESEKRETFKSHVLLEARRARLTAELQAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASR-YVRDEV 1434
            + ++K++  K   LLEAR+ +L +ELQ IYPI+   N  EF IRG+E+PADLY+ +DE++++ALGYT HL+ + +KYL+I LRYQ+++ ASR ++RD V
Sbjct:  278 INNKKQDWLKIKFLLEARKIKLLSELQTIYPIERLDN-GEFAIRGVEMPADLYAREDEQVAAALGYTVHLLLLASKYLEIPLRYQLLFMASRSFIRDPV 375
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: A0A7S2SPW0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.380e-16
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 1 
Query: 1159 ETFKSHVLLEARRARLTAELQAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRY-VRDEV 1434
            E  +   LLEAR+ +L +ELQ+IYPI  +    E+ I+GL+LP D  S DD+++SSALGY  H+V MLAKY QI LRYQ+ Y ASR  VRD V
Sbjct:  348 EALRHEFLLEARQVKLVSELQSIYPIT-ETEHHEWAIKGLDLPEDCTSADDDQVSSALGYVVHVVVMLAKYFQIPLRYQLAYFASRSAVRDRV 439
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: A0A7S2ATJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATJ2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.480e-12
Identity = 48/116 (41.38%), Postives = 76/116 (65.52%), Query Frame = 1 
Query: 1105 EAEEAAIEDGRQLESEKRETFKSHVLLEARRARLTAELQAIYPIKY----QGNLKEFTIRGLELPADLYSI-DDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASR-YVRDEV 1434
            EA + + E+ + +  ++ E  +S  LLEAR+ +L +ELQ+IYPI        +   + IR L L   +  + DDER++SALGY  HL+ ML+KYL++SLRY++ ++ASR ++RD V
Sbjct:   80 EARKLSGEEQKDVSDKREELDRSEYLLEARQVKLVSELQSIYPISSIDDPHDDKTHWIIRDLVLTNPIQDMKDDERLASALGYITHLLVMLSKYLEVSLRYKLEFSASRSHIRDRV 195
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: A0A7S2BP53_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BP53_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.930e-11
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 1 
Query: 1267 IRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRY-VRDEV 1434
            IRGL+LP +  + DDE +SSALGY  HL+ ML+KYLQI LRYQ++Y+ASR  VRD V
Sbjct:    2 IRGLDLPYNYEAKDDEVVSSALGYVTHLMLMLSKYLQIPLRYQLVYSASRSAVRDRV 58
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BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Match: K3WUK5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUK5_GLOUD)

HSP 1 Score: 75.1 bits (183), Expect = 1.000e-10
Identity = 41/89 (46.07%), Postives = 68/89 (76.40%), Query Frame = 1 
Query: 1183 LEARRARLTAELQAIYPIKYQGNLKEFTIRGLE-LPADLYSI---DDERISSALGYTAHLVCMLAKYLQISLRYQVI-YNASRYVRDEV 1434
            + +R+A L  +L A+YPI+Y+G + E+ IRG++ L +DL +    +++ IS+ALGY AHLV ML+KYLQ++LRY+V+ Y++  Y++DE+
Sbjct:  372 IRSRQAMLVKQLGAVYPIEYEG-VGEYKIRGIKILNSDLTAAGRAEEDTISTALGYIAHLVFMLSKYLQVNLRYRVVPYSSRSYLKDEI 459
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10865.774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMT0_9PHAE2.300e-27190.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL65_ECTSI1.320e-20592.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FL64_ECTSI1.680e-3495.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U751_9STRA2.550e-2249.67Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XLF7_9STRA6.280e-2158.89Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3HCI1_9STRA3.460e-1850.51Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SPW0_9STRA5.380e-1654.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2ATJ2_9STRA1.480e-1241.38Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2BP53_9STRA8.930e-1163.16Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K3WUK5_GLOUD1.000e-1046.07Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10865contigEcto-sp13_S_contig10865:37..4728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score134.0
Seed ortholog evalue1.8e-28
Seed eggNOG ortholog2880.D7FL64
Preferred nameUVRAG
Model size1434
KEGG koko:K01384,ko:K21249
KEGG Pathwayko04140,ko04150,ko04310,ko04390,ko04550,ko04916,ko04934,ko05165,ko05166,ko05200,ko05205,ko05217,ko05224,ko05225,ko05226,map04140,map04150,map04310,map04390,map04550,map04916,map04934,map05165,map05166,map05200,map05205,map05217,map05224,map05225,map05226
KEGG ModuleM00677
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000149,GO:0000226,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000726,GO:0001932,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005813,GO:0005815,GO:0005856,GO:0005942,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006810,GO:0006890,GO:0006906,GO:0006914,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007034,GO:0007049,GO:0007051,GO:0007059,GO:0007098,GO:0007275,GO:0007399,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007548,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0008285,GO:0008593,GO:0009056,GO:0009057,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010506,GO:0010508,GO:0010564,GO:0010638,GO:0010646,GO:0010648,GO:0012505,GO:0015630,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016239,GO:0016241,GO:0016322,GO:0017124,GO:0019058,GO:0019220,GO:0019222,GO:0019898,GO:0019904,GO:0021700,GO:0022008,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030100,GO:0030139,GO:0030154,GO:0030182,GO:0030260,GO:0030496,GO:0030539,GO:0031023,GO:0031090,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031399,GO:0031410,GO:0031982,GO:0032268,GO:0032465,GO:0032501,GO:0032502,GO:0032535,GO:0032801,GO:0032879,GO:0032991,GO:0033043,GO:0033554,GO:0034622,GO:0034641,GO:0035112,GO:0035126,GO:0035215,GO:0035239,GO:0035295,GO:0035493,GO:0042127,GO:0042325,GO:0042551,GO:0043112,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043243,GO:0043244,GO:0043549,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044403,GO:0044409,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045324,GO:0045335,GO:0045746,GO:0045807,GO:0045859,GO:0046483,GO:0046661,GO:0046718,GO:0046907,GO:0048193,GO:0048259,GO:0048260,GO:0048284,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048608,GO:0048666,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051036,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051171,GO:0051174,GO:0051179,GO:0051234,GO:0051235,GO:0051246,GO:0051302,GO:0051338,GO:0051640,GO:0051641,GO:0051645,GO:0051649,GO:0051651,GO:0051657,GO:0051684,GO:0051701,GO:0051704,GO:0051716,GO:0051726,GO:0051806,GO:0051828,GO:0060255,GO:0060429,GO:0060562,GO:0060627,GO:0061024,GO:0061025,GO:0061458,GO:0061695,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0071695,GO:0071704,GO:0071840,GO:0071900,GO:0071985,GO:0080090,GO:0090066,GO:0090174,GO:0090304,GO:0090598,GO:0097680,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:1901096,GO:1901098,GO:1901360,GO:1901575,GO:1902494,GO:1990234
Exons8
EggNOG free text desc.SNARE complex assembly
EggNOG OGsKOG2896@1,KOG2896@2759
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-19_005330.1
Cds size1434
COG Functional cat.OU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10865.774.1prot_Ecto-sp13_S_contig10865.774.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10865 37..4728 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462560.0139594-CDS-Ecto-sp13_S_contig10865:36..2491681462560.0139594-CDS-Ecto-sp13_S_contig10865:36..249Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10865 37..249 -
1681462560.0313773-CDS-Ecto-sp13_S_contig10865:639..7461681462560.0313773-CDS-Ecto-sp13_S_contig10865:639..746Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10865 640..746 -
1681462560.0407078-CDS-Ecto-sp13_S_contig10865:1341..14471681462560.0407078-CDS-Ecto-sp13_S_contig10865:1341..1447Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10865 1342..1447 -
1681462560.0493538-CDS-Ecto-sp13_S_contig10865:1891..20531681462560.0493538-CDS-Ecto-sp13_S_contig10865:1891..2053Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10865 1892..2053 -
1681462560.0626252-CDS-Ecto-sp13_S_contig10865:2552..26981681462560.0626252-CDS-Ecto-sp13_S_contig10865:2552..2698Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10865 2553..2698 -
1681462560.0717952-CDS-Ecto-sp13_S_contig10865:3240..35341681462560.0717952-CDS-Ecto-sp13_S_contig10865:3240..3534Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10865 3241..3534 -
1681462560.0815601-CDS-Ecto-sp13_S_contig10865:3805..40751681462560.0815601-CDS-Ecto-sp13_S_contig10865:3805..4075Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10865 3806..4075 -
1681462560.0909393-CDS-Ecto-sp13_S_contig10865:4592..47281681462560.0909393-CDS-Ecto-sp13_S_contig10865:4592..4728Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10865 4593..4728 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10865.774.1

>prot_Ecto-sp13_S_contig10865.774.1 ID=prot_Ecto-sp13_S_contig10865.774.1|Name=mRNA_Ecto-sp13_S_contig10865.774.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=478bp
RSGPAAATVGSGIGSVRANGERDSASVTSASLRSLQAVLMINDASASPGG
APASKAADNVYGHLDPPAVAAATPTAGGGTQIVDGTRSGAGGCCGRGKAL
LTTGVSQPTVNPTWPVSEASWLHADAQVEDLDGTRLLLLRVFAVDPDSAS
ARDPSHPRQSPAPPPAQALGHGGVDAAARAGDGTATLGPVVWECTIDVKG
LTALPVGSRLSHLWALPADCLLVEMYNGGLYAADWVVQALSSNSALPEAV
AGGRARAGGGGGEAWRDDSDEEDDEDQEPLDEVLRRVLVLEAEAERGRVE
LAAQLEKAAPGDRKHCAAAESACAMDTLRLELTNQQELLEAEEASFFREK
RYLEVETLAVEELLQGIAEAEEAAIEDGRQLESEKRETFKSHVLLEARRA
RLTAELQAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHL
VCMLAKYLQISLRYQVIYNASRYVRDEV
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mRNA from alignment at Ecto-sp13_S_contig10865:37..4728-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10865.774.1 ID=mRNA_Ecto-sp13_S_contig10865.774.1|Name=mRNA_Ecto-sp13_S_contig10865.774.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4692bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10865:37..4728- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGAGCGGTCCAGCAGCAGCGACCGTGGGGTCCGGGATTGGAAGTGTTCG
GGCCAATGGCGAACGCGATTCTGCTTCAGTCACGAGCGCAAGCCTCCGCA
GCTTGCAAGCGGTCCTCATGATAAACGATGCATCAGGTTTGTGCGGCTGC
CATCCCGATACGGTTGTGAACACCAAGCAAATTGGAAGGCCCACACAAAA
CGAGAGAGGTTAGACCTTAGAGTACGAAAGGGCAGCTCGACTAGCTAGTC
AGAGATTTCCCCCACACTGCCCGGTTGATTATGAAGGCATCTAGGGCCTG
ACGGCTAGTATAGGTGGTGACATGTTTAGCAAAGCAGTACATGTATAAAT
CTTCCTCCAACAGTCACATCGTGTTCTGGATGCTGTTTCAAGACCCCTTC
ACACGGGTGGGACGAAATGATGTTCTACTTCTTGTAGGCCGAATCGCTAC
TGCTACGGTGCCGTGGTATGTCCCTGCATCTGTTCTGCCGCTGCAAGCTG
TGTGCTCGGACTGGAACTGACGTGAACTAGGCCCAGTAAGTACAGGGCTC
CCGTTGTCGCTGCGCCCTGCTCTTTGATTTCTCGCGGTGCCAACCGCTAC
ACAGCTTTCGCCACAACGACTGGTCTCCTTGCTTCGTTTGTTGTTACGCC
CAGCTTCGCCAGGAGGCGCGCCAGCCTCTAAAGCGGCCGACAACGTGTAC
GGCCACCTTGACCCACCGGCGGTAGCAGCTGCAACACCAACAGCAGGAGG
CGGTACACAGATTGTTGACGGCACGAGGAGCGGTGCCGGTGGTTGTTGTG
GTAGGGGGAAGGCCTTGCTGACCACGGGCGTTTCGCAGCCCACCGTTAAC
CCCACTTGGCCCGTTTCTGAGGCATCTTGGCTGCACGCGGATGCCCAGGT
GGAAGATCTGGACGGCACGCGACGTGAGTGCTGCTTGCTTTTCAGGCGTG
TGATGGGTGCATGGTTTTTGCAGGACGTGTTTTGTCTTGCGTGTCTTCTG
CGAATGGTGGTGCTTACGTTGTTCCCGATGCACTCTTTTCCATGTTTCTC
CCATTCCTATGAATAGCTGCTGCTGCCGCTGCTGCTGCTGTTTCTGCGGT
TGTATGTTTGATGACCGGAGGAGATCCCAGACGACGCCCTCACTGTCTAA
CCCCGCGCCCAATGGCTACGCTTTGGTTTTACGGAGGGGAGCAGTACTCT
TGCTGCGGGTCTTTGCCGTTGATCCGGACTCTGCGAGCGCCCGAGATCCT
TCGCACCCAAGGCAGTCGCCGGCACCACCACCTGCTCAAGCCTTGGGGCA
TGGGGGGGTCGATGCCGCAGCAAGGGCAGGGGATGGCACGGCGACCCTCG
GGCCAGTGGTGTGGGAGTGCACGATAGACGTCAAAGGGTTAACGGCACTG
CCGGTCGGATCGAGGCTGTCCCACTTGTGGGCGCTGCCCGCGGACTGTTT
GCTGGTGGAGATGTATAACGGGGGCCTCTACGCCGCAGGTGCGTTATTTC
CAGTGTCTTTCGTACACCCTACAATCCTGTGGCGTAATTCGGGGGGCTCG
CGAGAGTGACTTTGTTTTTGGTGGAAAGGGCGGTGAATACATCCCACGCC
TAGTAGGGGGCTGTATTGGAAAGAGTCACGCCACTGTCTTGTCTTGCTAC
TGTTTTGTCTTTCGTTCTGTTCCTCGAGACTGTAAGTGTTTCGCGAAAGG
TCGTTGTATTCACATTGTTGATTCGGAATGAAGCAATAACACGTCAAGCT
CTGCCTTGAGGATACCGTCTCTCCGCCACGGCACGCAGCAACGGGGTGTA
CCATGTGTCCACGCGGGTTTCAAGGCTGAGCACAGCAGTCGGCCTTTCTC
ACAAGAGCCAGTTCGACGCAACGCTCCTGTTCACTGCACGAATCGCGTGT
GTGCCGCTTTGCTCGCGTCTTAGCTTGTTTGGCGATTTCATGCGCCGAGG
GCCTCGGTCCGATTACAATAGCCCCTCCATCGAACTAGCCTCAACAGTCC
TCGTGTCGTGTGGCTCCACTTGTACTCAAGACTGGGTAGTCCAAGCGCTG
TCGAGCAACTCGGCGCTCCCTGAGGCCGTAGCGGGGGGTAGGGCCCGGGC
CGGCGGCGGCGGGGGCGAAGCATGGCGAGACGATTCTGACGAGGAAGACG
ACGAGGACCAAGAGCCCCTGGACGAGGTGCCGCGCAGTCAAGCCCAAAAG
CAGAAAGCACAACATACCGCGAGAGGCGGAGAGATGGGCACGCCCCCTAG
GCCTATTTTCAAAAGCTCGATTGCTCCGCAACCAAGGAGGCGGTGCCATC
CATCACCAAGAATGATGGTTTTGGACACGTCTCGTCGAGGGCGTTCCGCA
GACGTATCGGGCTCTTTGCTCGCCCACGTCTCTGAGCCACTGCGCTGAAA
CCAGTTGTGTACAGTAGACAGGCACCAGCCGGAAGACCGACCGGAATGAG
TGACTATCGGCTTCCATGCCTCTATCGATTTTTATGGTTACAATGTGTTG
CTGGGGTTGTTGCCGCTGCTGATGTTGCTGGTTCTCCCATACCCTCGTCT
GGTAAAAATCACCCCGCTGTTCTTTGGGTTCGGATCTGCTTGGCCGATCT
GCGAATCGCTTCTACCGATCGACCCGATGGGTTCTACCATTCAACGGGTT
CTATGCGTACCAATCGACATTTCAGGTGCTGCGACGAGTGTTGGTGTTGG
AGGCGGAGGCGGAGAGAGGAAGGGTAGAACTAGCCGCTCAGTTGGAGAAG
GCAGCACCCGGCGACAGAAAGCACTGCGCTGCGGCTGAAAGCGCGTGCGC
GATGGATACCCTGAGGTTGGAATTAACCAATCAGCAGGTACCACAGAGCA
GGAAAAAGAAGGTTTATAATATTCTCGGACGTGGATAGCGTGCCCGTGCA
TCGCAGTTTTGAAGGGTACGAAAAAGTTCCGCGGTGCACTAGTTGCGTTT
GGTTGTTTTCGTTGTTTGTTCCTCGGGGCTTCATGAGTCAAACACGGGGA
TGGGACAAGCGACACTGACACGGATCGCCTCCACTTCTTGCAGGAGAAGC
GATGTTTCATGCTTAAAAGCCTTGCTATTATAAACGCTTCAAATTCGCCT
AGGAATGAGAACATCTTAAAGAGGTTGGTTTAATCCTGTGAACAATAAAC
TTGGTGGATGGCCGCTGGGACAGGGGGTTTGGACGTTTCAATGGGAAAAT
GTTCAACGTCGGTCGGAAGGTACTCTCGGCTATTAACACCCTGCGCATGC
CGTGAACGGGTTTTTTGAAACGTTGCACCAGGAGTTGCTAGAGGCAGAGG
AGGCGTCTTTTTTCAGGGAAAAACGGTACCTGGAGGTCGAGACACTGGCG
GTTGAGGAGCTCCTTCAAGGAATAGCCGAAGCCGAAGGTGATACCCTCCT
CGCTGCGTCAAATTTGTACTATTACCGCTGTACCCTATCGTTTTGTTCGT
GGTGTGTAAGGTCTTTTCGGTAAATTGGTTGGCGAAATTTACGGATCTTG
TTTTCTCTGGTACGCGGTGACGTCCCTTTCTACTCAATACTGTGTAGGGC
GAATCAGCCAAATCAATGGATAAAGCTTACCCACCTGGAAACGATTTTTT
GTTCTTTTGATTCAGTGCGGTATCCAGTCTAGTGCGATCGGCAGTTCTCG
CGCCTTTAGCGTAGATGGGGTCTACCTGACCTTGTGTTCCCCCGGCAATG
ATGCTGCTCTTGGACGTTGTTCCTTGTGTGATGCTCGAGTATTTTGCTGC
AGACGTTCAGTGCGCATGACGTATTCTTCGACATGACCGGTCGGCAATCT
GTTGCGGTGTTGCTGATGTGTCATGGAGTTGTTTGCCATGTAATGGGTTT
TGGGCTGTAGTCTTCTGTAGGGTCGCGAGATTTGTCGACAGGAGCATTCC
CTGTACATCGCCCCATTCGGCCGGATTTGGCGAAGTGCGTGTTCAGATTT
CCCTTTTTGTACTGCTCCCAACCTCGCTGCAGAAGCTGCAATCGAAGACG
GCCGACAGCTAGAGTCGGAGAAGAGGGAAACCTTCAAGAGCCACGTATTG
TTGGAGGCGAGGAGGGCGAGGTTAACAGCTGAGCTACAGGTGCCTACCAC
ATTTAGATTTTCCTCGGTTCTCCCCACCATCCCATCCAAGGGAGACAGCT
CGCATTTTCCTCGCAAAGGGTCCAGTATATCCGATTTAGGTAGTTGTGTC
GTCGCTCAGCGTTTCGAGTTATTTGCCATCTCCTCACGACCTGATGGCCA
TATAGGAGATGGTGCCCCGATCTGGCTACCGTAACCTGCCTGTTGTGTTC
ACCTCAGAGCTACGTCCACTCTGTGGTAGACCATGCACCTCAGGATACTA
GTATTAGGCTTTCAACTTAAGCGAAAGCACGACTCACTCCAACCCATGAA
TAGTCATGCTAGATCGTCAGTGTGTTTGATGCGATATATCCGTTGATTGG
CTACGTGATTTGTACTTAAAATGTCTCAGGCCATCTACCCCATCAAGTAC
CAGGGCAACCTCAAAGAATTTACCATTCGAGGGCTTGAGCTTCCGGCCGA
CTTGTACAGCATAGACGACGAAAGGATCTCATCCGCACTGGGCTACACTG
CCCACCTGGTCTGCATGCTTGCCAAGTACCTCCAGATTTCTCTGCGGTAT
CAAGTCATCTACAATGCATCGAGGTATGTACGCGATGAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10865:37..4728-

>mRNA_Ecto-sp13_S_contig10865.774.1 ID=mRNA_Ecto-sp13_S_contig10865.774.1|Name=mRNA_Ecto-sp13_S_contig10865.774.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1434bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10865:37..4728- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGAGCGGTCCAGCAGCAGCGACCGTGGGGTCCGGGATTGGAAGTGTTCG
GGCCAATGGCGAACGCGATTCTGCTTCAGTCACGAGCGCAAGCCTCCGCA
GCTTGCAAGCGGTCCTCATGATAAACGATGCATCAGCTTCGCCAGGAGGC
GCGCCAGCCTCTAAAGCGGCCGACAACGTGTACGGCCACCTTGACCCACC
GGCGGTAGCAGCTGCAACACCAACAGCAGGAGGCGGTACACAGATTGTTG
ACGGCACGAGGAGCGGTGCCGGTGGTTGTTGTGGTAGGGGGAAGGCCTTG
CTGACCACGGGCGTTTCGCAGCCCACCGTTAACCCCACTTGGCCCGTTTC
TGAGGCATCTTGGCTGCACGCGGATGCCCAGGTGGAAGATCTGGACGGCA
CGCGACTACTCTTGCTGCGGGTCTTTGCCGTTGATCCGGACTCTGCGAGC
GCCCGAGATCCTTCGCACCCAAGGCAGTCGCCGGCACCACCACCTGCTCA
AGCCTTGGGGCATGGGGGGGTCGATGCCGCAGCAAGGGCAGGGGATGGCA
CGGCGACCCTCGGGCCAGTGGTGTGGGAGTGCACGATAGACGTCAAAGGG
TTAACGGCACTGCCGGTCGGATCGAGGCTGTCCCACTTGTGGGCGCTGCC
CGCGGACTGTTTGCTGGTGGAGATGTATAACGGGGGCCTCTACGCCGCAG
ACTGGGTAGTCCAAGCGCTGTCGAGCAACTCGGCGCTCCCTGAGGCCGTA
GCGGGGGGTAGGGCCCGGGCCGGCGGCGGCGGGGGCGAAGCATGGCGAGA
CGATTCTGACGAGGAAGACGACGAGGACCAAGAGCCCCTGGACGAGGTGC
TGCGACGAGTGTTGGTGTTGGAGGCGGAGGCGGAGAGAGGAAGGGTAGAA
CTAGCCGCTCAGTTGGAGAAGGCAGCACCCGGCGACAGAAAGCACTGCGC
TGCGGCTGAAAGCGCGTGCGCGATGGATACCCTGAGGTTGGAATTAACCA
ATCAGCAGGAGTTGCTAGAGGCAGAGGAGGCGTCTTTTTTCAGGGAAAAA
CGGTACCTGGAGGTCGAGACACTGGCGGTTGAGGAGCTCCTTCAAGGAAT
AGCCGAAGCCGAAGAAGCTGCAATCGAAGACGGCCGACAGCTAGAGTCGG
AGAAGAGGGAAACCTTCAAGAGCCACGTATTGTTGGAGGCGAGGAGGGCG
AGGTTAACAGCTGAGCTACAGGCCATCTACCCCATCAAGTACCAGGGCAA
CCTCAAAGAATTTACCATTCGAGGGCTTGAGCTTCCGGCCGACTTGTACA
GCATAGACGACGAAAGGATCTCATCCGCACTGGGCTACACTGCCCACCTG
GTCTGCATGCTTGCCAAGTACCTCCAGATTTCTCTGCGGTATCAAGTCAT
CTACAATGCATCGAGGTATGTACGCGATGAGGTG
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