mRNA_Ecto-sp13_S_contig10833.748.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: D7FZA2_ECTSI (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA2_ECTSI) HSP 1 Score: 730 bits (1884), Expect = 2.890e-257 Identity = 361/388 (93.04%), Postives = 367/388 (94.59%), Query Frame = 1
Query: 79 TTASPPGRPRSSAAQHSKRPYSRDQHQRRPPSTGDVDRETGHGKVGELVEGAPVAGDGLWADPGNEAGEIEAGGSKVLPIEAFADQDEGCPPMTKTEKRRLWLKRRRSGEFYFRSEFKGLVYAVMESRGWKPSCPPRVPDECLTVPYVDSWEEIADWFDPSRPGCGQPDERDRLALPAVVAAQTEDGAASREDDPCSDSMRAGESPPPQEEYDDVIVSSTRACKPWDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
TTASPPGRPRSSAAQHSKRPYSRDQ + R STGDVDRET GKVGELVEGAPVAGDGLW D GNEAGE EAGGSKVLPIEAFADQDEGCPPMTKTE+RRLWLKRRRSGEFYFRSEFKGLV+AVMESRGWKPSCPPRVPDECLTVPYVDSWEE D FDPSRPG GQPDERDRLAL AVVAAQ EDGA REDDPCSD+MRA ESP Q+EYDDVIVSSTRACKPWDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKR+AQLYARGELAEA AYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT
Sbjct: 19 TTASPPGRPRSSAAQHSKRPYSRDQWRTRRASTGDVDRETDDGKVGELVEGAPVAGDGLWTDKGNEAGEKEAGGSKVLPIEAFADQDEGCPPMTKTERRRLWLKRRRSGEFYFRSEFKGLVHAVMESRGWKPSCPPRVPDECLTVPYVDSWEETVDGFDPSRPGFGQPDERDRLALSAVVAAQAEDGATGREDDPCSDNMRASESPQQQQEYDDVIVSSTRACKPWDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRRAQLYARGELAEAQAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 406
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: A0A6H5LE09_9PHAE (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE09_9PHAE) HSP 1 Score: 675 bits (1741), Expect = 1.250e-236 Identity = 329/357 (92.16%), Postives = 337/357 (94.40%), Query Frame = 1
Query: 172 STGDVDRETGHGKVGELVEGAPVAGDGLWADPGNEAGEIEAGGSKVLPIEAFADQDEGCPPMTKTEKRRLWLKRRRSGEFYFRSEFKGLVYAVMESRGWKPSCPPRVPDECLTVPYVDSWEEIADWFDPSRPGCGQPDERDRLALPAVVAAQTEDGAASREDDPCSDSMRAGESPPPQEEYDDVIVSSTRACKPWDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
STGDVD T GKVGE VEGAPVAG GLWAD GN AGE EAG SKVLPIEAFADQDEGCPPMT TEKRRLWLKRRRSGEFYFRSEFKGLV+AVMESRGWKPSCPPRVPD+CLTVPYVDSWEE+AD FDPSRP CGQPDERDRLALPAVVAAQTE+G EDDPCSD+MR +SPPPQ+E+DDVIVSSTRACKPWDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEA AYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT
Sbjct: 21 STGDVDVGTDDGKVGEFVEGAPVAGGGLWADTGNGAGEKEAGCSKVLPIEAFADQDEGCPPMTITEKRRLWLKRRRSGEFYFRSEFKGLVHAVMESRGWKPSCPPRVPDDCLTVPYVDSWEELADGFDPSRPDCGQPDERDRLALPAVVAAQTENGVTGCEDDPCSDNMRTADSPPPQQEHDDVIVSSTRACKPWDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAQAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 377
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: A0A7S2UXZ1_9STRA (Tubulin--tyrosine ligase-like protein 9 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXZ1_9STRA) HSP 1 Score: 188 bits (477), Expect = 2.890e-54 Identity = 85/164 (51.83%), Postives = 115/164 (70.12%), Query Frame = 1
Query: 754 WDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWA---KPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVL 1236
WD+HW+ W E + L WQ++NH+RN ELCRKDLM+KNLK+++ QL G EA YNFFPVSF +P++YA+FVEEFK GG+W+MKP G+A+GKGIFLF++LS++ W K L + D +++VQRYI +P+++GGKKFDLRLY L
Sbjct: 44 WDIHWADRDWVYEVFD-SMHLESWQRLNHYRNGRELCRKDLMIKNLKRKRRQLEKEGSFEEAQGYNFFPVSFVLPREYAMFVEEFKRQGGVWIMKPIGSAQGKGIFLFSRLSEISEWRTDFKSKLDGNSQGQDQPQVEAYIVQRYIMDPFLVGGKKFDLRLYAL 206
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: A0A7S3Y3A5_HETAK (Tubulin--tyrosine ligase-like protein 9 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3A5_HETAK) HSP 1 Score: 190 bits (482), Expect = 1.770e-52 Identity = 84/163 (51.53%), Postives = 117/163 (71.78%), Query Frame = 1
Query: 754 WDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
WD+HW+ W + L WQ++NH+RN ELCRKDL++KN+K+++ L G EA AYNF PVSF +P++YA+FVEEFK GG+W+MKP G+A+GKGIFLFT+L+++ W + +R R D +++VQRYI++PY++GGKKFDLRLY LVT
Sbjct: 41 WDIHWADRDWVYDVFD-TMHLESWQRLNHYRNGRELCRKDLLVKNIKRKRRTLEKEGAFEEAQAYNFLPVSFVLPREYAMFVEEFKRQGGVWIMKPIGSAQGKGIFLFTRLAEISEW-RTDFKQRADRRDRPEVEAYIVQRYIADPYLVGGKKFDLRLYALVT 201
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: A0A7S4ED39_9STRA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED39_9STRA) HSP 1 Score: 191 bits (484), Expect = 3.260e-52 Identity = 88/166 (53.01%), Postives = 120/166 (72.29%), Query Frame = 1
Query: 754 WDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKP---HLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
WD HW+ +W E L P Q++NHFRN ELCRKDL++KNLK+ K L G++ +A AY+F P+SF +P++YA+FVEEFK SGG+W+MKP G+A+G+GIFLF++LS++ W HL + K A P +++VQRYI NPY++GGKKFD+RLYVLVT
Sbjct: 108 WDFHWAEREWVYEVFD-TMHLEPHQRLNHFRNGRELCRKDLLVKNLKRMKRGLQRDGQVDQAKAYDFMPLSFVLPREYAMFVEEFKRSGGVWIMKPIGSAQGRGIFLFSRLSEISEWRTDPYRHLNKDDKDPPRAEPEAYIVQRYIENPYLVGGKKFDMRLYVLVT 272
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: F0XW04_AURAN (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW04_AURAN) HSP 1 Score: 190 bits (483), Expect = 3.450e-50 Identity = 89/167 (53.29%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 754 WDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKP--HLIRRMKRHDP--ANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
WD+HW+ +W E L P Q++NHFRN ELCRKDL++KNLK+ K L G+L +A AY+F P+SF +P++YA+FVEEFK GG+W+MKP G+A+G+GIFLF++LS++ W HL R D A P +++VQRYI NPY++GGKKFD+RLYVLVT
Sbjct: 37 WDVHWAEREWVYEVFD-TMHLEPHQRINHFRNGRELCRKDLLVKNLKRMKRNLQRDGQLEQARAYDFMPLSFVLPREYAMFVEEFKRCGGVWIMKPIGSAQGRGIFLFSRLSEISEWRTDPRHLQRDGGDRDSQRAEPEAYIVQRYIENPYLVGGKKFDIRLYVLVT 202
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: A0A482SPF5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPF5_9ARCH) HSP 1 Score: 175 bits (444), Expect = 7.250e-48 Identity = 82/168 (48.81%), Postives = 113/168 (67.26%), Query Frame = 1
Query: 754 WDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRM-----KRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
WD W+ +W T L WQ++NH+RN ELCRKDLM KN+KKR+ QL G EA+AY+F P +F +P++Y++FVEEFK+ GG+W+MKP G+A+GKGIFLFT+LS++ W + K+ D ++VVQRY+ P ++GGKKFD+RLY LVT
Sbjct: 61 WDFVWADREWIYATYD-RMHLESWQRLNHYRNGRELCRKDLMAKNIKKRRRQLEKEGRFEEANAYDFIPTTFVLPREYSMFVEEFKKVGGVWIMKPIGSAQGKGIFLFTRLSEISDWRTDFKAYKPGPTAPKQQDDKEVEAYVVQRYLQYPLLVGGKKFDMRLYALVT 227
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: A0A7S1C2X3_9STRA (Tubulin--tyrosine ligase-like protein 9 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2X3_9STRA) HSP 1 Score: 178 bits (452), Expect = 8.340e-48 Identity = 91/166 (54.82%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 754 WDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKES-GGIWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPG--SFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
WDLHW+ +W E L WQ+VNHFRN ELCRKDL++KN+K++K L G+ EA Y+F P ++ +P DYALFVEEFK G W+MKP G A+GKGIFLFTKLS + W + R P NP S+VVQ+YISNPY++GGKKFD+RLYVLVT
Sbjct: 46 WDLHWADREWVYEVFDSIH-LDNWQRVNHFRNGRELCRKDLLIKNVKRQKKVLDKDGQHDEAAKYSFCPTTYVLPGDYALFVEEFKRHPGAAWIMKPIGKAQGKGIFLFTKLSQISEWRTDY------RWKPDNPSVESYVVQQYISNPYLVGGKKFDMRLYVLVT 204
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: A0A5A8E0J4_CAFRO (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0J4_CAFRO) HSP 1 Score: 176 bits (446), Expect = 1.370e-46 Identity = 88/172 (51.16%), Postives = 113/172 (65.70%), Query Frame = 1
Query: 736 TRACKPWDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGG-IWVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPG--SFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
T + WD+HW+ +W E A L WQ+VNHFRN ELCRKDL++KN+K+ K L G+ EA ++F PV+F +P DYALFVEEF G +W+MKP G A+GKGIFLF KLS + W H R P PG ++VVQ+YI NPY++GGKKFD+R+Y LVT
Sbjct: 54 TESDDDWDMHWADREWVYEVFD-AGHLMSWQRVNHFRNGRELCRKDLLVKNIKRAKRTLDKSGKPEEAARFDFCPVTFVLPGDYALFVEEFNRCAGTVWIMKPIGRAQGKGIFLFHKLSQISQWKSEH------RWKPDTPGVETYVVQKYIPNPYLVGGKKFDMRMYALVT 218
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Match: A0A2R5GDK3_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDK3_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.300e-46 Identity = 86/166 (51.81%), Postives = 115/166 (69.28%), Query Frame = 1
Query: 754 WDLHWSYTKWAVETMRFARKLAPWQKVNHFRNSNELCRKDLMLKNLKKRKAQLYARGELAEAHAYNFFPVSFEMPKDYALFVEEFKESGGI---WVMKPSGAAEGKGIFLFTKLSDVKAWAKPHLIRRMKRHDPANPGSFVVQRYISNPYVIGGKKFDLRLYVLVT 1242
WD+HWS W ++ A WQ+VNH+RN ELCRKDL++KNLK++K QL G AEA AY FFP +F +P++YA+FVE FK++G W+MKP G ++G+GIFLF L+D++ W R K D A+ S++VQRYI NPY++GGKKFDLR+Y LVT
Sbjct: 15 WDIHWSDRDWIIDHFDNAH-FETWQRVNHYRNDRELCRKDLLIKNLKRQKRQLERDGS-AEADAYEFFPDTFVLPREYAIFVETFKKAGATTATWIMKPIGKSQGRGIFLFRNLNDIRKWKSE---TRWKA-DNADVESYIVQRYICNPYLVGGKKFDLRIYALVT 174 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10833.748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10833.748.1 >prot_Ecto-sp13_S_contig10833.748.1 ID=prot_Ecto-sp13_S_contig10833.748.1|Name=mRNA_Ecto-sp13_S_contig10833.748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=414bp MENGRSGRFPPQRRRSVSSASIWPWQTTASPPGRPRSSAAQHSKRPYSRDback to top mRNA from alignment at Ecto-sp13_S_contig10833:2..3980- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10833.748.1 ID=mRNA_Ecto-sp13_S_contig10833.748.1|Name=mRNA_Ecto-sp13_S_contig10833.748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3979bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10833:2..3980- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10833:2..3980- >mRNA_Ecto-sp13_S_contig10833.748.1 ID=mRNA_Ecto-sp13_S_contig10833.748.1|Name=mRNA_Ecto-sp13_S_contig10833.748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1242bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10833:2..3980- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |