mRNA_Ecto-sp13_S_contig10798.722.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10798.722.1 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE) HSP 1 Score: 1257 bits (3252), Expect = 0.000e+0 Identity = 683/742 (92.05%), Postives = 698/742 (94.07%), Query Frame = 1
Query: 1 QTGVPNQCVYSPRLKSGRKKKVRIDGVLYEEGTYGGELALANPGGVRHNVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNRDAVNGSPTSPEQAHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTVLMRSWGQLEDRDIGLAQLEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWLQVRGTMCAEVEWKPQFSRSRLSEASENAAYAAALERGYTCGKHKKNSGAAGWGERCGASEAPKQPVPNPVDQVSASDIAEGGSQLRAALDAGLAEMGTPFNDLGGLDILEGSGADLXXXXXXXSEFDLSQLESPEQVVEASGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GAVAVNSMQIPAGLVAGRSGSSSVAGSRGAGASAPVIIGGGEISRGPSFGISGPAAVSSIFGPAGASSGGALSRQSSLDINTIMQV 2199
+TGVPNQCVYSPRLKSGRKKK RIDGVLYEEGTYGGELA ANPGGVR NVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPE+RRQA+LAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRN++A GSPTSPEQ HSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVT+LMRSWGQLEDRDIGLAQ+EEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWLQVRGTMCA++EWKPQFSRSRLS+ASENAAYAAALER Y+CGKHKK SGAA GER GA+EAPK PVPNPVDQVSASDI EGGSQLRAAL+AGLAE+GTPFNDLGGLDILEGSGADLXXXXXXXSEFDLSQLESPEQVVEASGE XXXXXXXXXXXX XXXXXX GA AVNSMQIPAGLVAGRSGSS VAGSRGAGA APVIIGGGEISRGPSFGISGPAAVSSIFGPAGASSGGALSRQSSLDINTIMQ+
Sbjct: 146 ETGVPNQCVYSPRLKSGRKKKFRIDGVLYEEGTYGGELARANPGGVRRNVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPETRRQARLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNQNATKGSPTSPEQTHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWLQVRGTMCADLEWKPQFSRSRLSDASENAAYAAALERRYSCGKHKKRSGAAWCGERWGAAEAPKHPVPNPVDQVSASDIVEGGSQLRAALNAGLAEIGTPFNDLGGLDILEGSGADLXXXXXXXSEFDLSQLESPEQVVEASGEAEXXXXXXXXXXXXTGSPAVGATDVPAAGSGXXXXXXXXPGXPGAGGAAAVNSMQIPAGLVAGRSGSSDVAGSRGAGAGAPVIIGGGEISRGPSFGISGPAAVSSIFGPAGASSGGALSRQSSLDINTIMQM 887
BLAST of mRNA_Ecto-sp13_S_contig10798.722.1 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA) HSP 1 Score: 218 bits (555), Expect = 3.600e-57 Identity = 143/430 (33.26%), Postives = 217/430 (50.47%), Query Frame = 1
Query: 148 VDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVS-LDLVFQMYDQPDGAVSGFNRSGAVGDWRRNRDAVNGSPTSPEQAHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLF-VATDLSECITGVVIVKIFGGVTVLMRSWGQLEDRDI----------GLAQLEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWL 1401
V P A F+AS A+GL GHVEN F+A Y+RD N +P+T+E +V GMLE + L AN RR AKLAVFWGVVA+GSRILGA RY + +ALR+CFD +D VVQAYLLL ++ETM GN +RY+ A T+H K ++++ + + L+ + Q++ G DAV+ P + G+++ +A +M+ + P+ AL+ + ++ +V DP + C V +L +++A G + ++ L++C+ V I+ G+T+ M Q GL ++ G+ A++RPGL TFP+WWH +HCAAI L H G Y R +A F+ +PGT++P + ++ VC C + WL
Sbjct: 275 VHPLARPFTASPALGLVGHVENIFIAAYIRDLNNFIPMTSEGAVMSGMLET------GKSLVPANAAPAASKRRSAKLAVFWGVVALGSRILGAPRADVERYRAQVTAALRDCFDEDDPMVVQAYLLLGSLETMLGNCPKARRYMHFAKTVH----ASLRAKSVQEQHQAQLEGLETLLQVF----------------GARMCECDAVDEGPCTAS------GANTAVAAAACSEMLQSIFMARTGQAVKPMDALRLTLGMPNITRKVLDPESPCPIVLAHLHHLENACDGVGVIINTSSVLTDCVAIVAPQMIWHGITLSMSGRIQXXXXXXXXXXXXXXXAGLKEVAAGMELAMSRPGLMTFPLWWHCMHCAAITLQHHGLRADYDRFKAVFDNHCYPGTQLPPFDAFNLDHVCGA-DNLCRQYQAWL 671
BLAST of mRNA_Ecto-sp13_S_contig10798.722.1 vs. uniprot
Match: A0A835YR83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR83_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.770e-38 Identity = 129/426 (30.28%), Postives = 191/426 (44.84%), Query Frame = 1
Query: 163 GRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRS---EQDVSLDLVFQMY-----DQPDGAVSGFNRSGAVGDWRRNRDAVNGSPTSPEQAHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTVLMRSWGQLEDRDIGLAQLEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSP--ASVCPQLGGNCSKLAYWLQVR 1410
G F A A GL G +EN+FLA+YL+D + PL ES V GM++ AD + +AL CFD D +VV+AYLLL T+ +M GN + KRY + T+H G A G++ D S + L + Q Y D PD A+ P +PE G D V QM A SP+ AL+ + + G +S+ D + C V+ L ++ A G ++ + L +C+ ++ G+T++M+ G+L +G+ +E G+ A+TRPGL TF +WWH LHCAAI +AH R DTY+RL+ +++ T PGT++PS+ DY SVC C + +WL+ R
Sbjct: 772 GSFRAGPATGLVGRLENYFLASYLKDLHGFTPLACESIVVRGMMQAF------------------------------------------ADRAA--------AALGACFDEPDVQVVRAYLLLGTLHSMLGNASKAKRYAHFSQTLHAGLA----GQMREDSSWLESECALLQTLIQAYGPRLLDSPD--------------------AMRKPPDNPE------GID-------VPQMSLMAQRGHVR---SPINALRIMIGLQGFASKALDHRSTCAEVRHSLLLLEHAWDGVLAVITNSGLQDCVAVTAPQCLYHGITLVMQ--GRLA---MGVEHIERGINLAITRPGLVTFTIWWHCLHCAAITMAHLNRVDTYLRLKDVYDRHTHPGTQLPSLADYHADCGSVCGP-DQYCQQFRHWLERR 1101
BLAST of mRNA_Ecto-sp13_S_contig10798.722.1 vs. uniprot
Match: A0A835Z4T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T4_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.760e-19 Identity = 99/374 (26.47%), Postives = 143/374 (38.24%), Query Frame = 1
Query: 373 AKLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKE---------------------------------------VVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNG-NAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNRDAVNGSPTSPEQAHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSE-----------VFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTVLMRSWGQLEDRDIGLAQLEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDY 1341
A AVFW V +GS + GAA T RY ALR CFD D VV AYL L +E M G+ A +RY+ + T++ G A G G D +E + L+ + + + S V P +PE G A++ S P AL+ + V +P + V+Q + + A A + T LS CI + G T+LM+ E + GLA +E+G+ A+ +P L F +WWHA+HC I LAH GR Y+R +A ++ TFPGT++P + Y
Sbjct: 29 ASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAW-DSNEGGMLSSLIASFGPR----ILDTSESEQV------------PPDNPESLDVPG----------------MALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQ-----ERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTY 364
BLAST of mRNA_Ecto-sp13_S_contig10798.722.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 1.160e-8 Identity = 62/209 (29.67%), Postives = 95/209 (45.45%), Query Frame = 1
Query: 40 LKSGRKKKVRIDGVLYEEGTY--GGELALANPGG---VRHNVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVL-----SPAVSSRGLATANPIKQPESR---------RQAKL------AVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHA 591
+ SG K + E +Y GG LA N VR + R S+S A GL G EN FL + F ++PLTTES+V M+EV+ A S G + + + E + R+ L + W +A+G+ + G + E + Y+ L +L ECFD E +AYL++S + + G+E +RY+ A
Sbjct: 119 ISSGDASKAKRLAEAQEGASYDTGGVLATVNTRSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCFG-ILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKDWHGGGALARRHTLPDHPAKCMMWCAIALGALMRGISVEHVMGYVQLAWKSLTECFDGRSVEHARAYLIMSFLHRVIGDEDKNERYMSFA 326 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10798.722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10798.722.1 >prot_Ecto-sp13_S_contig10798.722.1 ID=prot_Ecto-sp13_S_contig10798.722.1|Name=mRNA_Ecto-sp13_S_contig10798.722.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=733bp QTGVPNQCVYSPRLKSGRKKKVRIDGVLYEEGTYGGELALANPGGVRHNVback to top mRNA from alignment at Ecto-sp13_S_contig10798:435..5671- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10798.722.1 ID=mRNA_Ecto-sp13_S_contig10798.722.1|Name=mRNA_Ecto-sp13_S_contig10798.722.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5237bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10798:435..5671- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10798:435..5671- >mRNA_Ecto-sp13_S_contig10798.722.1 ID=mRNA_Ecto-sp13_S_contig10798.722.1|Name=mRNA_Ecto-sp13_S_contig10798.722.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2199bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10798:435..5671- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |