mRNA_Ecto-sp13_S_contig10775.702.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 631 bits (1628), Expect = 3.360e-208 Identity = 315/324 (97.22%), Postives = 322/324 (99.38%), Query Frame = 1
Query: 1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVV+EKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVF+VPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVA+PDSRGS VYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDM+LGVDIVNEKQ+DKIIGPKKAKAK+TKQQKLDDALGPDDGAGIDKAVEDGK+EDLEAAP WEADPDDPPDSPVDIS
Sbjct: 1624 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVEEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVANPDSRGSAVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMMLGVDIVNEKQLDKIIGPKKAKAKKTKQQKLDDALGPDDGAGIDKAVEDGKLEDLEAAPIWEADPDDPPDSPVDIS 1947
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 601 bits (1550), Expect = 2.770e-198 Identity = 306/326 (93.87%), Postives = 312/326 (95.71%), Query Frame = 1
Query: 1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
MMLIILYLVY+QVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI +FWYFL RQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH DM+LGVDIVNEKQ+DKIIGPK K K+T QQKLDDALGPDDGAG+DKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS
Sbjct: 1425 MMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI-------SFWYFLTRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHVQDMMLGVDIVNEKQLDKIIGPKNTKVKKTNQQKLDDALGPDDGAGVDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 1743
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE) HSP 1 Score: 546 bits (1408), Expect = 3.580e-188 Identity = 283/324 (87.35%), Postives = 291/324 (89.81%), Query Frame = 1
Query: 1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECD PKH YKIYAAVMICIYPLGIP AF YFL RQ SRINPPTDKGLK+QRGRKH EKMNQRRTDRAIAPTSFLWNAYYP+RYYYEV EC RRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLL FELLRPHTDHLDMQLYRTGCLVIF TN LA NVASP SR EVYS+VLIIVNVLF LSIF NTWAAAKASFSRRHDMVLGVDIVNEK++DKIIGPKK KAK+T QQKLDDAL PDDGAG K VEDGKMEDL+A PAWEADPD PPDSP+DIS
Sbjct: 358 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDKPKHYTYKIYAAVMICIYPLGIPGAFCYFLARQMSRINPPTDKGLKNQRGRKHDA-EKMNQRRTDRAIAPTSFLWNAYYPSRYYYEVIECFRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYRTGCLVIFLTNSLA-----NVASPCSRSCEVYSIVLIIVNVLFVLSIFGNTWAAAKASFSRRHDMVLGVDIVNEKELDKIIGPKKTKAKKTNQQKLDDALAPDDGAGFAKTVEDGKMEDLKATPAWEADPDGPPDSPIDIS 675
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 7.820e-122 Identity = 198/311 (63.67%), Postives = 241/311 (77.49%), Query Frame = 1
Query: 4 MLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWE 930
MLI+LYLVY+Q+STVVFQ F+CED PEIGKS+LRADFRIECDT +H YK YA VMICIYPLGIPA F+YFL RQRSRINPPTD+ LK +RG +HV ++KM R D++IAPTSFLW+AY+P YYYEVFEC+RRLLLTG+LVFLVPDTPGQVAF C+FA +SL+ FELLRPH ++LD QLYRTGCLVI FTNFLAL+IK+ A DS GS YSV L+IVN++FFLSI++N A KA FSR H DM+LGVD+V+E ++K++GP+ +K D+++G G D K ED E P W+
Sbjct: 1197 MLIVLYLVYTQISTVVFQTFSCEDLPEIGKSYLRADFRIECDTQRHTLYKAYAGVMICIYPLGIPAIFFYFLVRQRSRINPPTDEALKKRRGGRHVAEQKMTVRDQDQSIAPTSFLWSAYFPTCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAIVSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACATTKAMFSRSHAQDMLLGVDVVDESTINKVLGPE--------MRKTDESMGKTGG--------DAKTEDGEERPFWD 1491
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 1.570e-121 Identity = 201/312 (64.42%), Postives = 237/312 (75.96%), Query Frame = 1
Query: 1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWE 930
MMLI+LYLVY+Q+STVVFQ FACE PEIGK +LRADF IECDT +H YK YA VM+CIYPLGIPA F YFL RQRSRINPPTD+ LK +RG +HVV+ KM R D++IAPTSFLWNAY+P YYYEVFEC+RRLLLTG+LVFLVPDTPGQVAF C+FA LSL+ FELLRPH +H+D QLYRTGCLVI FTNFLAL+IK+ A DS GS YSV L+IVN++FFLSI++N AKA FSR H DM+LGVDIV+E +++++GP+K K K P AG D K ED E P+W+
Sbjct: 1429 MMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKRRGGRHVVERKMTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLGVDIVDESTINQVLGPEKRKTKE-----------PHGTAGGDA-----KTEDREERPSWD 1724
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G0A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A6_ECTSI) HSP 1 Score: 341 bits (874), Expect = 4.400e-114 Identity = 173/193 (89.64%), Postives = 182/193 (94.30%), Query Frame = 1
Query: 400 MRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
MRRLLLTGLLVF+VPDTPGQVAFGCVFAFLSLLAFE LRPH DHLDM+LYRTGCLVIFFTNFLALMIKANVASPDSRG +VYS+VLIIVNVLFFLSIFW+TWAAAKAS SRRH DMVLGVDIVNEKQ+DKIIGPK K+T QQKLDDALGPDDGAG+DKAVEDGKMEDLEAAPAWEADPDDPPDSP+DIS
Sbjct: 1 MRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFERLRPHIDHLDMELYRTGCLVIFFTNFLALMIKANVASPDSRGCKVYSIVLIIVNVLFFLSIFWDTWAAAKASSSRRHVQDMVLGVDIVNEKQLDKIIGPKNTNVKKTNQQKLDDALGPDDGAGVDKAVEDGKMEDLEAAPAWEADPDDPPDSPIDIS 193
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 357 bits (916), Expect = 9.100e-110 Identity = 174/185 (94.05%), Postives = 177/185 (95.68%), Query Frame = 1
Query: 1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRT 555
MMLIILYLVY+QVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYK YAA MICIYPLGIPAAF YFL RQ SRINPPTDKGLK+QRGRKHVV EKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFEC+RRLLLTGLLVFL PDTPGQVAFGCVFAFLSLL FELLRPHTDHLDMQLYRT
Sbjct: 1158 MMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKTYAAAMICIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVVTEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECLRRLLLTGLLVFLAPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYRT 1342
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G0A7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A7_ECTSI) HSP 1 Score: 244 bits (623), Expect = 1.870e-77 Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 1
Query: 556 GCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
GCLVIFFTNFLALMIKANVASPDSRG EVYSVVLIIVNVLFFLSIFWNT AAAKASFSRRH DMVLGVDIVNEKQ+DKIIGPKK K K+TKQQKLDDALGPDDGAG KAVEDGKMEDLEAAPAWE DPDDPPDSP+DIS
Sbjct: 18 GCLVIFFTNFLALMIKANVASPDSRGCEVYSVVLIIVNVLFFLSIFWNTLAAAKASFSRRHVQDMVLGVDIVNEKQLDKIIGPKKTKVKKTKQQKLDDALGPDDGAGFAKAVEDGKMEDLEAAPAWEVDPDDPPDSPIDIS 158
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI) HSP 1 Score: 246 bits (627), Expect = 8.310e-70 Identity = 128/216 (59.26%), Postives = 157/216 (72.69%), Query Frame = 1
Query: 289 VVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWE 930
V++KM+ R D++IAPTSFLWNAY+P YYYEVFEC+RRLLLTG+LVFLVPDTPGQVAF C+FA LSL+ FELLRPH ++LD QLYRTGCLVI FTNFLAL+IK+ A DS GS YSV L+IVN++FFLSI++N AKA FSR H DM+LGVDIV+E +++++GP+K K K +G A D K ED E P W+
Sbjct: 1250 TVEQKMSVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLGVDIVDESTINQVLGPEKRKTKEP--------------SGT--ACGDAKTEDGEERPFWD 1449
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI) HSP 1 Score: 216 bits (551), Expect = 1.220e-59 Identity = 111/254 (43.70%), Postives = 158/254 (62.20%), Query Frame = 1
Query: 7 LIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPT--DKGLK-------DQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHD 741
L++ +LV++ ST+VF+ FAC+D G+SFLRAD+ I C T KH Y++YA VMI +YP+GIP + + L R R +NP GL+ R + + +++ +RR + + P+ FLW + P+ YYYEV EC RR+LLTG L+F+ P T Q A C+FAF SLL FELLRPH D D LYR GC+VIF +NFLAL+IKA+ A SR V +++ +N+ L++ ++TW A + S D
Sbjct: 1299 LLLTFLVFTSSSTIVFKTFACDDEAVEGESFLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNPRAYYSTGLELDGEMSEGPRETEEELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGSRS--VLGGIMVAINIFLILAVLFSTWFATQQSVDDSRD 1550 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10775.702.1 >prot_Ecto-sp13_S_contig10775.702.1 ID=prot_Ecto-sp13_S_contig10775.702.1|Name=mRNA_Ecto-sp13_S_contig10775.702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=324bp MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYback to top mRNA from alignment at Ecto-sp13_S_contig10775:2..4860- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10775.702.1 ID=mRNA_Ecto-sp13_S_contig10775.702.1|Name=mRNA_Ecto-sp13_S_contig10775.702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4859bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10775:2..4860- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10775:2..4860- >mRNA_Ecto-sp13_S_contig10775.702.1 ID=mRNA_Ecto-sp13_S_contig10775.702.1|Name=mRNA_Ecto-sp13_S_contig10775.702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=972bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10775:2..4860- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |