mRNA_Ecto-sp13_S_contig10775.702.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10775.702.1
Unique NamemRNA_Ecto-sp13_S_contig10775.702.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 631 bits (1628), Expect = 3.360e-208
Identity = 315/324 (97.22%), Postives = 322/324 (99.38%), Query Frame = 1
Query:    1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
            MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVV+EKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVF+VPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVA+PDSRGS VYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDM+LGVDIVNEKQ+DKIIGPKKAKAK+TKQQKLDDALGPDDGAGIDKAVEDGK+EDLEAAP WEADPDDPPDSPVDIS
Sbjct: 1624 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVEEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVANPDSRGSAVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMMLGVDIVNEKQLDKIIGPKKAKAKKTKQQKLDDALGPDDGAGIDKAVEDGKLEDLEAAPIWEADPDDPPDSPVDIS 1947          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 601 bits (1550), Expect = 2.770e-198
Identity = 306/326 (93.87%), Postives = 312/326 (95.71%), Query Frame = 1
Query:    1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
            MMLIILYLVY+QVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI       +FWYFL RQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH  DM+LGVDIVNEKQ+DKIIGPK  K K+T QQKLDDALGPDDGAG+DKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS
Sbjct: 1425 MMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICI-------SFWYFLTRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHVQDMMLGVDIVNEKQLDKIIGPKNTKVKKTNQQKLDDALGPDDGAGVDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 1743          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE)

HSP 1 Score: 546 bits (1408), Expect = 3.580e-188
Identity = 283/324 (87.35%), Postives = 291/324 (89.81%), Query Frame = 1
Query:    1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
            MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECD PKH  YKIYAAVMICIYPLGIP AF YFL RQ SRINPPTDKGLK+QRGRKH   EKMNQRRTDRAIAPTSFLWNAYYP+RYYYEV EC RRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLL FELLRPHTDHLDMQLYRTGCLVIF TN LA     NVASP SR  EVYS+VLIIVNVLF LSIF NTWAAAKASFSRRHDMVLGVDIVNEK++DKIIGPKK KAK+T QQKLDDAL PDDGAG  K VEDGKMEDL+A PAWEADPD PPDSP+DIS
Sbjct:  358 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDKPKHYTYKIYAAVMICIYPLGIPGAFCYFLARQMSRINPPTDKGLKNQRGRKHDA-EKMNQRRTDRAIAPTSFLWNAYYPSRYYYEVIECFRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYRTGCLVIFLTNSLA-----NVASPCSRSCEVYSIVLIIVNVLFVLSIFGNTWAAAKASFSRRHDMVLGVDIVNEKELDKIIGPKKTKAKKTNQQKLDDALAPDDGAGFAKTVEDGKMEDLKATPAWEADPDGPPDSPIDIS 675          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 7.820e-122
Identity = 198/311 (63.67%), Postives = 241/311 (77.49%), Query Frame = 1
Query:    4 MLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWE 930
            MLI+LYLVY+Q+STVVFQ F+CED PEIGKS+LRADFRIECDT +H  YK YA VMICIYPLGIPA F+YFL RQRSRINPPTD+ LK +RG +HV ++KM  R  D++IAPTSFLW+AY+P  YYYEVFEC+RRLLLTG+LVFLVPDTPGQVAF C+FA +SL+ FELLRPH ++LD QLYRTGCLVI FTNFLAL+IK+  A  DS GS  YSV L+IVN++FFLSI++N  A  KA FSR H  DM+LGVD+V+E  ++K++GP+         +K D+++G   G        D K ED E  P W+
Sbjct: 1197 MLIVLYLVYTQISTVVFQTFSCEDLPEIGKSYLRADFRIECDTQRHTLYKAYAGVMICIYPLGIPAIFFYFLVRQRSRINPPTDEALKKRRGGRHVAEQKMTVRDQDQSIAPTSFLWSAYFPTCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAIVSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACATTKAMFSRSHAQDMLLGVDVVDESTINKVLGPE--------MRKTDESMGKTGG--------DAKTEDGEERPFWD 1491          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 1.570e-121
Identity = 201/312 (64.42%), Postives = 237/312 (75.96%), Query Frame = 1
Query:    1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWE 930
            MMLI+LYLVY+Q+STVVFQ FACE  PEIGK +LRADF IECDT +H  YK YA VM+CIYPLGIPA F YFL RQRSRINPPTD+ LK +RG +HVV+ KM  R  D++IAPTSFLWNAY+P  YYYEVFEC+RRLLLTG+LVFLVPDTPGQVAF C+FA LSL+ FELLRPH +H+D QLYRTGCLVI FTNFLAL+IK+  A  DS GS  YSV L+IVN++FFLSI++N    AKA FSR H  DM+LGVDIV+E  +++++GP+K K K            P   AG D      K ED E  P+W+
Sbjct: 1429 MMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKRRGGRHVVERKMTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLGVDIVDESTINQVLGPEKRKTKE-----------PHGTAGGDA-----KTEDREERPSWD 1724          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G0A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A6_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 4.400e-114
Identity = 173/193 (89.64%), Postives = 182/193 (94.30%), Query Frame = 1
Query:  400 MRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
            MRRLLLTGLLVF+VPDTPGQVAFGCVFAFLSLLAFE LRPH DHLDM+LYRTGCLVIFFTNFLALMIKANVASPDSRG +VYS+VLIIVNVLFFLSIFW+TWAAAKAS SRRH  DMVLGVDIVNEKQ+DKIIGPK    K+T QQKLDDALGPDDGAG+DKAVEDGKMEDLEAAPAWEADPDDPPDSP+DIS
Sbjct:    1 MRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFERLRPHIDHLDMELYRTGCLVIFFTNFLALMIKANVASPDSRGCKVYSIVLIIVNVLFFLSIFWDTWAAAKASSSRRHVQDMVLGVDIVNEKQLDKIIGPKNTNVKKTNQQKLDDALGPDDGAGVDKAVEDGKMEDLEAAPAWEADPDDPPDSPIDIS 193          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 9.100e-110
Identity = 174/185 (94.05%), Postives = 177/185 (95.68%), Query Frame = 1
Query:    1 MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRT 555
            MMLIILYLVY+QVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYK YAA MICIYPLGIPAAF YFL RQ SRINPPTDKGLK+QRGRKHVV EKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFEC+RRLLLTGLLVFL PDTPGQVAFGCVFAFLSLL FELLRPHTDHLDMQLYRT
Sbjct: 1158 MMLIILYLVYTQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKTYAAAMICIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVVTEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECLRRLLLTGLLVFLAPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYRT 1342          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7G0A7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A7_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.870e-77
Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 1
Query:  556 GCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDIS 972
            GCLVIFFTNFLALMIKANVASPDSRG EVYSVVLIIVNVLFFLSIFWNT AAAKASFSRRH  DMVLGVDIVNEKQ+DKIIGPKK K K+TKQQKLDDALGPDDGAG  KAVEDGKMEDLEAAPAWE DPDDPPDSP+DIS
Sbjct:   18 GCLVIFFTNFLALMIKANVASPDSRGCEVYSVVLIIVNVLFFLSIFWNTLAAAKASFSRRHVQDMVLGVDIVNEKQLDKIIGPKKTKVKKTKQQKLDDALGPDDGAGFAKAVEDGKMEDLEAAPAWEVDPDDPPDSPIDIS 158          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 8.310e-70
Identity = 128/216 (59.26%), Postives = 157/216 (72.69%), Query Frame = 1
Query:  289 VVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMVLGVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKMEDLEAAPAWE 930
             V++KM+ R  D++IAPTSFLWNAY+P  YYYEVFEC+RRLLLTG+LVFLVPDTPGQVAF C+FA LSL+ FELLRPH ++LD QLYRTGCLVI FTNFLAL+IK+  A  DS GS  YSV L+IVN++FFLSI++N    AKA FSR H  DM+LGVDIV+E  +++++GP+K K K                +G   A  D K ED E  P W+
Sbjct: 1250 TVEQKMSVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLGVDIVDESTINQVLGPEKRKTKEP--------------SGT--ACGDAKTEDGEERPFWD 1449          
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 1.220e-59
Identity = 111/254 (43.70%), Postives = 158/254 (62.20%), Query Frame = 1
Query:    7 LIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPT--DKGLK-------DQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHD 741
            L++ +LV++  ST+VF+ FAC+D    G+SFLRAD+ I C T KH  Y++YA VMI +YP+GIP  + + L R R  +NP      GL+         R  +  + +++ +RR +  + P+ FLW  + P+ YYYEV EC RR+LLTG L+F+ P T  Q A  C+FAF SLL FELLRPH D  D  LYR GC+VIF +NFLAL+IKA+ A   SR   V   +++ +N+   L++ ++TW A + S     D
Sbjct: 1299 LLLTFLVFTSSSTIVFKTFACDDEAVEGESFLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNPRAYYSTGLELDGEMSEGPRETEEELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGSRS--VLGGIMVAINIFLILAVLFSTWFATQQSVDDSRD 1550          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10775.702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRA9_9PHAE3.360e-20897.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B0_ECTSI2.770e-19893.87Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JI42_9PHAE3.580e-18887.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G119_ECTSI7.820e-12263.67Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5K4A5_9PHAE1.570e-12164.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0A6_ECTSI4.400e-11489.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0A8_ECTSI9.100e-11094.05Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7G0A7_ECTSI1.870e-7791.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXY9_ECTSI8.310e-7059.26Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FRH0_ECTSI1.220e-5943.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10775contigEcto-sp13_S_contig10775:2..4860 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score201.1
Seed ortholog evalue8.1e-49
Seed eggNOG ortholog2880.D8LRF6
Model size972
Hectar predicted targeting categorysignal peptide
Exons9
EggNOG OGs2D43J@1,2STRI@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_001200.1
Cds size972
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10775.702.1prot_Ecto-sp13_S_contig10775.702.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10775 2..4860 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462554.1219513-CDS-Ecto-sp13_S_contig10775:1..2351681462554.1219513-CDS-Ecto-sp13_S_contig10775:1..235Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 2..235 -
1681462554.1323984-CDS-Ecto-sp13_S_contig10775:490..6401681462554.1323984-CDS-Ecto-sp13_S_contig10775:490..640Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 491..640 -
1681462554.144473-CDS-Ecto-sp13_S_contig10775:965..9981681462554.144473-CDS-Ecto-sp13_S_contig10775:965..998Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 966..998 -
1681462554.156247-CDS-Ecto-sp13_S_contig10775:1722..17861681462554.156247-CDS-Ecto-sp13_S_contig10775:1722..1786Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 1723..1786 -
1681462554.1694784-CDS-Ecto-sp13_S_contig10775:2230..23341681462554.1694784-CDS-Ecto-sp13_S_contig10775:2230..2334Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 2231..2334 -
1681462554.1785977-CDS-Ecto-sp13_S_contig10775:2612..27051681462554.1785977-CDS-Ecto-sp13_S_contig10775:2612..2705Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 2613..2705 -
1681462554.1862788-CDS-Ecto-sp13_S_contig10775:3503..36161681462554.1862788-CDS-Ecto-sp13_S_contig10775:3503..3616Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 3504..3616 -
1681462554.1941595-CDS-Ecto-sp13_S_contig10775:3937..40701681462554.1941595-CDS-Ecto-sp13_S_contig10775:3937..4070Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 3938..4070 -
1681462554.2112646-CDS-Ecto-sp13_S_contig10775:4812..48601681462554.2112646-CDS-Ecto-sp13_S_contig10775:4812..4860Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10775 4813..4860 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10775.702.1

>prot_Ecto-sp13_S_contig10775.702.1 ID=prot_Ecto-sp13_S_contig10775.702.1|Name=mRNA_Ecto-sp13_S_contig10775.702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=324bp
MMLIILYLVYSQVSTVVFQAFACEDFPEIGKSFLRADFRIECDTPKHDNY
KIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVDE
KMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDT
PGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMI
KANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHDMVL
GVDIVNEKQMDKIIGPKKAKAKRTKQQKLDDALGPDDGAGIDKAVEDGKM
EDLEAAPAWEADPDDPPDSPVDIS
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mRNA from alignment at Ecto-sp13_S_contig10775:2..4860-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10775.702.1 ID=mRNA_Ecto-sp13_S_contig10775.702.1|Name=mRNA_Ecto-sp13_S_contig10775.702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4859bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10775:2..4860- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCTCATTATCCTGTACCTTGTGTACTCACAGGTTTCCACCGTGGT GAGGAGGCTGGACTACGGCAACGGGCCCAGAGATTGCAAGCTACTGTATC CCCCCGCGCACAAGATTGTGGCGTTCTATGTTGTGTGTTTGTTCTATTGT TGTGGATTCATGTTTTGTCGGAACAACAGCCGCTTTGGCAGTGACGCTTT TGTTTTGGTGTCATGCAGAGCCAGCCCGATATGCTGTCGTTTCGTTACGG CCGGCCTGTCCCATGCCGTACCGTAACCGTTCCATGCTGTATGCCCCCAT GCCATATCGTAGCCTTAACCGTTCCATGTCGCGCGTTCTCATACCGATCA TAACCCTAGCTGTTTCATGCCGTACGTTCCCGTACCATGCCAATAACCAA ATGGTTCCATACCGTACGGTAATTTACACTTAAGTCGCTAGCCCGTTTCC TCAGCGCTCCATATCAATCATTCATGCGGTCCGAAACCAAGTAAGCAACA CTCCAAACTATTCCATCCCGTACCGCGGTGGGCCCGGTTCTCCGCCCCCT GTTTTGCGACATGCCCTGTACGGGGCGGCGACCACAAAATCACGTGTTGC CAATGTTTGTCGATTGATACTGTAGCCGCAAAACCGGCATTGGCGATCTG CGCTAAATATCGAACTTCTTCTCACCTGACACCAATAGGGATCGACATAG CCGGCCCACGACTTGCTGCCATACACATAAGTATAGCAAAAACCATCAGG ACACTTTACTGTGTGGTGGCACGTGCGTTGCATAAAACAGGTGTTCCAAG CGTTTGCTTGCGAAGACTTCCCCGAGATCGGCAAGAGCTTCCTACGAGCC GACTTCCGGATAGAGTGCGACACGCCCAAGCACGACAACTACAAGATTTA CGCCGCCGTCATGATCTGCATCTGTGAGTTGTTAATATTATAGTTGATCC TCCATATTCTCACTGGTTCGGGGCGGGTGGAGTGCGGCTTCCAATAAACG TGAAAAAGGAGCAAATGACAATTTCATGATGTGTCGTCTTTGGTCGTGGA GGCAATCGTGCCACACATTGCCTCGTTTGCCGGTGCGGGGTGTCCTAGCT CCACTGCGACAATGTCGTTTGGTATATGACTACCCAACGCCAAGCTTAGT CTGATGCCGCTGTCGTACACTGATGTTCCTCGGTCTGTTCGTTTGTTTGT TTACCTCCCCCTCCCACGTATTAACGCAACGCGGAGCACCCAAGATCCTC TCGGTATTCCCGCAGCCTTCTGGTACTTCCTGAGGAGGCAGAGGTCCCGC ATCAACCCGCCCACGGACAAGGGGCTGAAGGACCAACGAGGTCGCAAGCA TGTTGTGGTGCGTGTGTGTGCGTGATGTGACTCGTAAGAGGCGTGGATCA TTAATAATCCCTAGAAGCACCGAGAGAGTTTTGGCGAAACGATGAGAAAC TTCTGTGTTCGTTGCACGCCCGTACACAGCATTTGTGGTGAAATAATTTT TCTCGGATGAAAGGATGCCTAATTACCACCACAACACATACACGTCGGTA GTGTGCCGGGGTCTGGTTCGAACAGCTGCAGTGAAATGAAGACACTGCGG TTAATCAAACATGAACCGATGTGTCGGCCTGCCGGCCGGTCGGAAAATGA TGCAAGACAGGAGTACGAAAGGTGCACTTGTGCGTCACACGTTTGCCAGG TTGTTTCTGAAAAAGATTTGGGTTTGCAAATGAACCAAGAGAATGGCATG ACGGTTGTTGTGCGTGGCACGTTAGCCACATTGCTTTATGAAGTAGAATT TCGGTAAATGCACCAAGAAGACTATTGGTTGCGTGCCTGCTTGCTTAATC ATTTTCCCCTGGCGCTCAGCGAAGTAGCGGTTGTACACAGCTGGCACGCA GACTAAACACCAAAGTGCCCATTCGACACCCTCTGTCTAGCGGAGGCAAC ATTGCCGGCATGTCAGCATTCACTAGGCAACTGTCGCGAGAGGTAGCGTA CCTTTCATTAGTGCGGCTAACGTTTTTGACGCCGAAATCAAAGCAGGGGA TACTTGGGGTCAGCGCCGACTAGTCTAGGCTAATGGGGTTATTTTCGGCC TTTCAAGTGCTACGACTACTGATACCCCCACCTCCCCAACTTTTGGTTTT GGCAGGACGAGAAGATGAATCAGAGGAGGACGGACCGAGCAATTGCGCCG ACTTCTTTCCTGTGGAACGCCTACTACCCGAACCGATACTACTACGAGGT ATGTTATGCAGCAACCCCAGCAATAACAGTGTTGTACCCCGAGAAAACGC AAAGCGGTACTGGTCCCTAATTAAGGCCGAGTTAGAACGGCCGGTCGCCC TGTTCAAGGCCGGTGAAAAGGTGCGACACAGATGGAAGTGTTCAAGTTGT CTCATCCTCGTTGTCCGACTACGGTAGTAGGGCCTTGTACCCGGTCATGT ATTCGACGCCATGCGCCCTTACTATCCCCCCCCCCCCCTCCCCAAACCCC GTTTTTTTTTTCGTTTTGGACGGCAGGTTTTCGAGTGCATGCGGCGTCTA CTGCTGACTGGGCTGCTGGTGTTCCTCGTGCCCGACACGCCGGGACAGGT GGCCTTCGGTTGCGTCTTCGCCTTCCTCAGGTGCGTGCGTGTGTGATAGC AAGCGTTCCTGCTGTGGTCCACGTTGTTATTGCGTCTTCGCCATCCTTAG GCATGTGTACAAAAACAAACACATACCTACTGTCGTTGTTGTTGCGTGTG GGTTTCCCGTAAGTTTGTTCTCCGAAGTATATGGATAAACGTACCTGCTG CCTTCCAGCCACTGTTGTTGCGGTCGTTGTATTGCGGAGTTTTCATGCGT CAAGTTCCTTCGTGAATTGGCACTAACGCTAAATTTGTTTTTCCGTTAAA TGTATTACTTTACCTGGAAGGTTTTGTTGAAAACTCCGTACTCCATACGT AAATGCGCCTGTTTGTTTTCCACCTCCTGGCTGACATTCTGGTCTGGTGT GTATTCCGTTGTCTCCCCCGTACACCATGAACTTCGTTCGGCTGCTCGGC TGTGTGGTTGGCGAAACCGAACAGCCTGTTGGCGTTTGAGCTGCTTCGGC CACACACGGACCACCTAGACATGCAGCTCTACCGTACGGTGAGAATGAAG AACGAACCTCGTTCGGAAGAACCTCCTTCCTCTCTCCCCGCTCACGCGCA AAGAGTGTGTGCGTATGTATGTCCCGTCTAATTTGGAGCCGGCCTAGACC ACGCACCTTTCGGTCTAGACTACCCGGTGTACGTTTGATGTAGAGGAATA TCACACGGGAGGAATGACACACAGGAGTTTGTTTTTTCATGTTGACTTTG GTATTTTTTTTGGTGTACTGCTGTCGTAGCAAACGCAATTAGACAGTTGG ATGCATGCAATCAAGAATAATAGTCAATCGGAGTACTCACTGCGATTAGT CTATTTGGCGAGCATTACTGAATAGCATGTCGTCTTCACAGGCCAGTAGA GGAATGAATGAACGACTTTATGTCTTGGAGTGTGAGGTTTCGTCTGCATC GCGGTTGACAGCAACACCCCCCAACATCTCATGGCCGGTTGCGCGCTCCT TGGTGAAGAAAAAGTTGCTGGACTGCTTCGATGAATTTGATATCTCCTAT GACGCTCTGTTTTTGACAGTAATGTACTCCCAAAATAACTGACACATTGA ACGGCTACGGCCCGAATGCACACCCGAGTGAAATAACGAATAAAACTGAC ACAAAAAACGTCTACTTTTACCTTTCTCACGTACACGACACCCCTTACCC TAGCCTTCCCCTCTCTCCGTTCGTCCGTGCCCCCTGCCCCCCCTCAATGA AAACTCAATCAGGGATGCCTGGTGATCTTCTTCACCAATTTCCTGGTGAG GGCCTGTTCCGGCTCTTTCTCGGTTGTAATGGTGGCATGTTCATACTTCT TTGACGAGACCAAGATTGGTGGCTTGCGTTTGGTTGTGACAGTACCGGGA AGGCAGGACAGTACTGACTGCCTTTGCTCTTAGTTCCTTGCGTCACGATT TTTTTCGCGATTAAGACAGGCCCTGGTTTGCACCTTGTGTGTCCTCTCTA TTCTAGGTCATGTCATGACTTTTTTGTTTTGCGCGAAAAAGATTGCGCAG ATTTACTTGTTGTCTATTTGTTGTCTAGATCTTGAGTGCTCCTTGCGTTT TTTAACGCGCAAACAAGCAGGCCCTGATGATCAAGGCCAACGTGGCCAGC CCGGACTCTAGGGGCTCGGAGGTGTACTCGGTCGTGCTGATCATCGTCAA CGTGCTCTTCTTCCTGTCTATCTTCTGGAATACCTGGGCCGCAGCTAAGG CCTCCTTCAGCAGACGCCACGTGCAGGCGAGACAGAAACGGAGACAGACA GACAGACAGACAGACAGACAGAGAGGTCCCGTTCCGTTCGCGGACGATGA TGATGATGATGATGATGATGACGATTGTTTACTTGCACCATCTTCCGGAC AGCCTGTTTTCTTCCTTCTGTTTGAAATATAAGTTTTCCCTCCGTTGGTA ACGTCTGGTTGCCACTCCCCACTGCATGCAATACACCTTGGTTCTGATTT CGACGCGCTTGCCCTTACTATTCAGGACATGGTGCTGGGAGTCGACATCG TCAACGAGAAACAGATGGACAAGATCATCGGCCCAAAGAAGGCCAAGGCC AAGAGGACAAAGCAGCAGAAGCTCGACGACGCCCTCGGTCCCGATGACGG TGCCGGCATCGATAAGGCCGTCGAAGACGGGAAGATGGAAGACCTTGAGG CTGCCCCCGCCTGGGAAGCGGACCCGGACGACCCCCCCGACTCGCCCGTC GACATCAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10775:2..4860-

>mRNA_Ecto-sp13_S_contig10775.702.1 ID=mRNA_Ecto-sp13_S_contig10775.702.1|Name=mRNA_Ecto-sp13_S_contig10775.702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=972bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10775:2..4860- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCTCATTATCCTGTACCTTGTGTACTCACAGGTTTCCACCGTGGT
GTTCCAAGCGTTTGCTTGCGAAGACTTCCCCGAGATCGGCAAGAGCTTCC
TACGAGCCGACTTCCGGATAGAGTGCGACACGCCCAAGCACGACAACTAC
AAGATTTACGCCGCCGTCATGATCTGCATCTATCCTCTCGGTATTCCCGC
AGCCTTCTGGTACTTCCTGAGGAGGCAGAGGTCCCGCATCAACCCGCCCA
CGGACAAGGGGCTGAAGGACCAACGAGGTCGCAAGCATGTTGTGGACGAG
AAGATGAATCAGAGGAGGACGGACCGAGCAATTGCGCCGACTTCTTTCCT
GTGGAACGCCTACTACCCGAACCGATACTACTACGAGGTTTTCGAGTGCA
TGCGGCGTCTACTGCTGACTGGGCTGCTGGTGTTCCTCGTGCCCGACACG
CCGGGACAGGTGGCCTTCGGTTGCGTCTTCGCCTTCCTCAGCCTGTTGGC
GTTTGAGCTGCTTCGGCCACACACGGACCACCTAGACATGCAGCTCTACC
GTACGGGATGCCTGGTGATCTTCTTCACCAATTTCCTGGCCCTGATGATC
AAGGCCAACGTGGCCAGCCCGGACTCTAGGGGCTCGGAGGTGTACTCGGT
CGTGCTGATCATCGTCAACGTGCTCTTCTTCCTGTCTATCTTCTGGAATA
CCTGGGCCGCAGCTAAGGCCTCCTTCAGCAGACGCCACGACATGGTGCTG
GGAGTCGACATCGTCAACGAGAAACAGATGGACAAGATCATCGGCCCAAA
GAAGGCCAAGGCCAAGAGGACAAAGCAGCAGAAGCTCGACGACGCCCTCG
GTCCCGATGACGGTGCCGGCATCGATAAGGCCGTCGAAGACGGGAAGATG
GAAGACCTTGAGGCTGCCCCCGCCTGGGAAGCGGACCCGGACGACCCCCC
CGACTCGCCCGTCGACATCAGC
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