mRNA_Ecto-sp13_S_contig10761.690.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: D8LF14_ECTSI (Putative: flagellar basal body protein [Chlamydomonas reinhardtii] n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF14_ECTSI) HSP 1 Score: 278 bits (712), Expect = 1.490e-87 Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 414
AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQ VGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV
Sbjct: 145 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQLVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 282
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A835YNS8_9STRA (Putative flagellar basal body protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS8_9STRA) HSP 1 Score: 223 bits (568), Expect = 4.810e-66 Identity = 107/140 (76.43%), Postives = 123/140 (87.86%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGG--EGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 414
A+PMGLP FDPVRL IEG EGL+GT A E++DE+TAGLWMAGKEFRRDQ+V DR+GKNEKT+ CKLQ+ G+GPP REP VSE+ERKAMMAFYFKRQEE+K+LAEANDDDYL SAWADP+QLQ+SLRGTG + APGV
Sbjct: 139 AYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGV 278
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A7S2UZF3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZF3_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.450e-58 Identity = 100/139 (71.94%), Postives = 116/139 (83.45%), Query Frame = 1
Query: 1 AFPMGLPEFDPVR-LTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 414
A+PMGLP++D VR L EG + LEGTQ G E+LD ETA LW AGKEFRR Q V DR+G NEKT+++ KLQ+ G+G P REP VSEDERKAMMAFYFKRQEE+K+LAEANDDDYLASAWADPK LQR LRG G+++APGV
Sbjct: 146 AYPMGLPDYDVVRQLLEEGAQALEGTQPGQEVLDPETAQLWGAGKEFRRGQCVSDRLGMNEKTKMVAKLQQSGAGAPAREPAVSEDERKAMMAFYFKRQEEIKKLAEANDDDYLASAWADPKSLQRGLRGVGSIKAPGV 284
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A7S2WGB4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGB4_9STRA) HSP 1 Score: 198 bits (504), Expect = 5.760e-58 Identity = 93/138 (67.39%), Postives = 115/138 (83.33%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 414
A+PMGLP +D V L + G EGL+GT A +++D ETA LW+A ++F+RDQ +GDR+G NEKT+++ KLQK GSGPP REP VSE+ERKAMMA YFKRQEE+KR+AEA DD+YLAS+WADPK LQRSLRG G VRAPG+
Sbjct: 38 AYPMGLPSWDTVALALGGLEGLDGTPAAADVVDPETATLWVASRDFQRDQKIGDRLGWNEKTKVVAKLQKEGSGPPAREPAVSEEERKAMMAHYFKRQEEMKRMAEAQDDEYLASSWADPKALQRSLRGQGQVRAPGL 175
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A6U4FW40_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FW40_9STRA) HSP 1 Score: 199 bits (507), Expect = 6.090e-57 Identity = 96/139 (69.06%), Postives = 116/139 (83.45%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQK-PGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 414
AFPMGLPEFD V LT+E +GLEGT A +LD TA LW AG+EF+R Q V DRVG+NEKT+++CKLQK GPPGREPG+SE+ERKAMMA YFK+QEE+K+LAEA++DDYL S+WADPK LQR+LRG G+VRAPG+
Sbjct: 147 AFPMGLPEFDTVALTLESADGLEGTAASQAVLDPATATLWCAGREFQRGQLVKDRVGRNEKTKVVCKLQKGDAGGPPGREPGISEEERKAMMAHYFKKQEEMKKLAEADEDDYLNSSWADPKALQRNLRGMGSVRAPGL 285
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A7S2WGM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGM0_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.590e-56 Identity = 93/138 (67.39%), Postives = 115/138 (83.33%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 414
A+PMGLP +D V L + G EGL+GT A +++D ETA LW+A ++F+RDQ +GDR+G NEKT+++ KLQK GSGPP REP VSE+ERKAMMA YFKRQEE+KR+AEA DD+YLAS+WADPK LQRSLRG G VRAPG+
Sbjct: 145 AYPMGLPSWDTVALALGGLEGLDGTPAAADVVDPETATLWVASRDFQRDQKIGDRLGWNEKTKVVAKLQKEGSGPPAREPAVSEEERKAMMAHYFKRQEEMKRMAEAQDDEYLASSWADPKALQRSLRGQGQVRAPGL 282
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A7S2C740_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C740_9STRA) HSP 1 Score: 197 bits (500), Expect = 6.190e-56 Identity = 91/138 (65.94%), Postives = 117/138 (84.78%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 414
A+PMGLP +D V L + G EGL+GTQA E++D ETA LW+A ++F+R Q VGDR+G NEKT+++ KLQK GSGPP REP VSE+ERKAMMA YFKRQE+LK+LAEA+DDDYLAS+WADPK +++SL+GTG ++APG+
Sbjct: 145 AYPMGLPAWDTVALALAGDEGLDGTQASAELMDPETATLWVASRDFQRGQKVGDRLGWNEKTKVVAKLQKTGSGPPAREPVVSEEERKAMMAHYFKRQEDLKKLAEASDDDYLASSWADPKAMKKSLQGTGAIKAPGL 282
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A7R9U8T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8T6_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.550e-55 Identity = 91/129 (70.54%), Postives = 109/129 (84.50%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRG 387
AFPMGLPEFD V L +E +GL GT G +LD ETA LW AG+EF+R + V DRVG+NEKT+++CKLQ+PG G PGREPG+SEDERKAMMA YFK+QEE+KRLAEA+DD+YL S+WADPKQLQ+SLRG
Sbjct: 155 AFPMGLPEFDIVALALESADGLAGTSVGNSVLDAETATLWCAGREFQRGEFVKDRVGRNEKTKVICKLQRPGGGAPGREPGISEDERKAMMAHYFKKQEEMKRLAEADDDEYLHSSWADPKQLQKSLRG 283
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A7S2MUC4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MUC4_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.110e-51 Identity = 87/137 (63.50%), Postives = 109/137 (79.56%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPG 411
A+PMGLPE+D V+L ++ + L+GT G E+LD LW+AGKEF R Q V DR+GKNEKT+++ KLQ GSGPPGREP VSE+E+KAMMA YFKRQEELKRLAE+ DDDYL S WAD K+++R+L+G G V+APG
Sbjct: 145 AYPMGLPEWDTVKLALDSVDNLKGTSVGNEVLDPNNTSLWVAGKEFERGQLVSDRLGKNEKTKVIAKLQPKGSGPPGREPVVSEEEQKAMMAHYFKRQEELKRLAESEDDDYLNSQWADSKEMKRNLQGLGNVQAPG 281
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Match: A0A7S4N8L1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8L1_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.180e-51 Identity = 86/138 (62.32%), Postives = 111/138 (80.43%), Query Frame = 1
Query: 1 AFPMGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 414
A+PMGLPE+D +L ++ +GLEGT G EILD+ LW+AGKEF+R Q V DR+GKNEKT+++ KLQ+ GPP REP VSEDERKAMMA Y KRQEELKRLAE+ +DDYL S+WADPK++++SL+G G ++APG+
Sbjct: 145 AYPMGLPEWDTAKLALDSLDGLEGTSVGKEILDKNATSLWVAGKEFQRGQFVSDRLGKNEKTKVLAKLQRSDDGPPAREPIVSEDERKAMMAHYSKRQEELKRLAESEEDDYLNSSWADPKEMKKSLQGLGDIKAPGL 282 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10761.690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10761.690.1 >prot_Ecto-sp13_S_contig10761.690.1 ID=prot_Ecto-sp13_S_contig10761.690.1|Name=mRNA_Ecto-sp13_S_contig10761.690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp MGLPEFDPVRLTIEGGEGLEGTQAGTEILDEETAGLWMAGKEFRRDQSVGback to top mRNA from alignment at Ecto-sp13_S_contig10761:2011..5440- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10761.690.1 ID=mRNA_Ecto-sp13_S_contig10761.690.1|Name=mRNA_Ecto-sp13_S_contig10761.690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3430bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10761:2011..5440- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10761:2011..5440- >mRNA_Ecto-sp13_S_contig10761.690.1 ID=mRNA_Ecto-sp13_S_contig10761.690.1|Name=mRNA_Ecto-sp13_S_contig10761.690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=408bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10761:2011..5440- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |