mRNA_Ecto-sp13_S_contig1073.670.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: D7FHC8_ECTSI (Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC8_ECTSI) HSP 1 Score: 1257 bits (3252), Expect = 0.000e+0 Identity = 671/714 (93.98%), Postives = 674/714 (94.40%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPEVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLSKSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQASFPFLYRPGFFLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAAPTGIVAKGAGKDGRSGSPSAAEAAPDDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHSYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVT 2142
MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPEVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLSKSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQ FLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETK EMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLG EETKGDGPATAG PLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVA PTGIVAKGAGKDGRSGS SAAE APDDPAEH+YKVPELE LGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGH+YVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKV+
Sbjct: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPEVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLSKSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQ-----------FLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETK----EMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGDNDGEDEAGADALVEGGHGAEETKGDGPATAGPPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAVPTGIVAKGAGKDGRSGSASAAEVAPDDPAEHVYKVPELERLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHAYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVS 699
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: A0A836CC02_9STRA (Coatomer subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC02_9STRA) HSP 1 Score: 820 bits (2117), Expect = 2.390e-286 Identity = 468/731 (64.02%), Postives = 542/731 (74.15%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPEVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLSKSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQASFPFLYRPGFFLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXE---ETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPA--TAGQPLVLSSLPVVEE-VAAP----TGIVAK---GAGK-----DGRSGSPSAAEAAPDDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHSYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKV 2139
MNSSEDLYRANSIRVL+RIID+ MLGAIERY+KQAI DKN++V+SSALVSGI L+ SP+VV+RW NEV E +SS +EMVQ+HAL+LLYQ K D LAV+KLVTQL+K RSPLA D++A NARAAYQ FLESSLRH++++V+YEAARAIC+LPGVEMNDLSPAI VLQ+FL+S KP L+FG MRTLS+VA +PM+I+KCN +ME LISD NRSIATLAITTLLKTG+EGSVDRLMKQIS+FMNEIADEFKI+VV AIRQLCL+YP KHRVLVGFLATFLREEGGF+FKKAITDCIVELM+AIP+TK E SLFHLCDFIEDCE+TALSTQIL LVG LGPSTSAPARYIRFIYNRVILENAAVRAAAV +LAKFAA++PSLRPSI VL+KRSL DEDDEVRDRATVA+ LL E E DG A AHL+L+ LPMSF+SLE+AV Y M + QPL+ S+LPVVEE V AP T +K GAG D R +A+ A DP +YK+PEL +LGRVFRS PV LTESETEYVVRCVKHI D +VVLDF++ NTI +QML + S+P+LY V S+ LP LK TGH YVVL A A EP F+CEL F+ +D DP +G E DED EGF EEYPLE++ ++T+DFMAKV
Sbjct: 149 MNSSEDLYRANSIRVLARIIDSAMLGAIERYVKQAINDKNAIVASSALVSGISLFNTSPDVVKRWNNEVQEALSSPNEMVQFHALALLYQAKQQDLLAVTKLVTQLTKGNTRSPLA--------------DLNAANARAAYQ-----------FLESSLRHKNEIVVYEAARAICHLPGVEMNDLSPAITVLQLFLSSPKPTLRFGAMRTLSDVAGTHPMAIVKCNEEMETLISDANRSIATLAITTLLKTGTEGSVDRLMKQISTFMNEIADEFKIIVVHAIRQLCLRYPQKHRVLVGFLATFLREEGGFDFKKAITDCIVELMSAIPDTK----ETSLFHLCDFIEDCEYTALSTQILHLVGALGPSTSAPARYIRFIYNRVILENAAVRAAAVSSLAKFAAKVPSLRPSITVLLKRSLADEDDEVRDRATVAIKLLASMPAAGDGEADAGGDENHQSEPVEEDALDGDAETS------EAAHLMLDGLPMSFASLERAVGLYALSMQSGTAQAQPLLFSTLPVVEEHVPAPLTKGTSAASKPLAGAGGGFGGGDSRVAPTAASAPATADPTAELYKIPELAALGRVFRSTAPVPLTESETEYVVRCVKHIFDAHVVLDFSVHNTIADQMLTEAS-----SEPELYSVVGSIPLPTLKYDQTGHCYVVLSRATEVAIEPVTFTCELHFKVVDCDPQSG--EADEDAEGFPEEYPLEEVELSTSDFMAKV 837
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: A0A6U1MSQ3_9STRA (Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MSQ3_9STRA) HSP 1 Score: 792 bits (2045), Expect = 1.240e-275 Identity = 444/729 (60.91%), Postives = 534/729 (73.25%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPEVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLSKSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQASFPFLYRPGFFLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKG------DGPATAG-LPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAAP-----TGIVAKGAGKDGRSGSPSAAEA-AP--DDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHSYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVT 2142
MNS+++LY+ANSIRVLSRIIDA MLGAIERY+KQAIVDKN LV+SSAL S ++L +P+++RRWVNEV E ++SQ++MVQYHALSLLYQIKAHDKLAVSKLV QLSK MRSPL VCLLIRYMS +LH+D+SATNAR AYQ FLE+ LRH+ +MV++EAARAIC LPGVE +DL PAI VLQ+FL+S KP L+F MR LSEVA ++P+S++KCN DME LI+DPNRSIATLAITTLLKTGSEGSVDRLMKQISSFM EIADEFK++V+ +IRQLCLKYP KHRVL+GF+ATFLREEGGFEFKK I D IV+LM AIPETK E SLFHLC+FIEDCEFTAL TQIL L+G +GPSTSAPARYIRFIYNR+ILE A VRAAAV ALAKFAA +PSLRPSI+VL++RSLLDE+DEVRDRA VA+++L EE G D PA G P G +LLLE LP+SF +LE++++AY H +AGQPL LS+LPVVEE AAP T + A + S AA AP +DPA +Y++PEL LGRVFRS PV LTESETEYVV+CVKH+ + VL+F ++NTI +Q L+++ V+VE + +LY VE S+ YVVL F CEL F +++DP +G +EGD E YPLE L ++ AD MAKV+
Sbjct: 139 MNSNQELYKANSIRVLSRIIDAAMLGAIERYMKQAIVDKNGLVASSALSSAMILLPKAPDLIRRWVNEVQEALNSQNQMVQYHALSLLYQIKAHDKLAVSKLVNQLSKGNMRSPLGVCLLIRYMSALLHEDMSATNARQAYQ-----------FLENCLRHKHEMVIFEAARAICQLPGVEASDLLPAITVLQLFLSSPKPTLRFVAMRCLSEVAIRHPLSVVKCNEDMEALIADPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMGEIADEFKVIVISSIRQLCLKYPQKHRVLIGFMATFLREEGGFEFKKTIVDSIVDLMQAIPETK----ESSLFHLCEFIEDCEFTALYTQILHLLGTMGPSTSAPARYIRFIYNRIILEKAVVRAAAVSALAKFAACVPSLRPSIKVLLQRSLLDENDEVRDRAAVAISVL-------------------EKEEDMGRGGAPTDDPAQEGDKPSGSGMAEYLLLEPLPLSFPALERSLRAYQSHPGGSAGQPLQLSTLPVVEEPAAPAPSAQTHKLGAPAPTTATAASXXAAPGGAPGGEDPAAALYQIPELADLGRVFRSTQPVWLTESETEYVVQCVKHVFQNHTVLEFKVNNTIPDQKLQDIKVQVEAQE-ELYSVERSIPAEVALYSQPASCYVVLARQADQEFVGCTFGCELHFNVVEIDPNSGEVEGDPXXXXXE--YPLEALELSVADHMAKVS 830
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: A0A7S2S5Q9_9STRA (Coatomer subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5Q9_9STRA) HSP 1 Score: 782 bits (2019), Expect = 8.640e-272 Identity = 440/728 (60.44%), Postives = 529/728 (72.66%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPEVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLSKSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQASFPFLYRPGFFLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAAPTGIVAKGAGKDGR---SGSPSAAEAA---------PDDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALP--ELKCGDTGHSYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVT 2142
MNSS+DLYRANSIRVL+RIID+ MLGAIERY+KQAIVD+NSLV+SSALVSG+ L ++SPEVVRRWVNEV E V S +MVQYHAL LLYQIK +D+LAVSK+VTQL++S M SPL VCLLIRY+S+IL DD+SA N R Q FLE SLRHRS++V+YEAA+AIC LP +E D++PA+ VLQ+FL+S K L++ M+ LS+VA + P +I+KCN DME LISD NRSIATLAITTLLKTG+EGSVDRLMKQISSFM EIADE+KIVVV+AIRQLCLKYP KHRVLVGFLA+ LREEGGF+FKK+ITD IV+L+ IPETK E SLFHLC+FIEDCEFTALSTQIL L+G LGP T APARYIRFIYNRVILENA VRAAA+ ALA+FA + ++R S+ VL++RSLLDEDDEVRDRAT+AL LL E +GDG A + L+E LPMSFS+L++AVK Y QP+ L++LPVVE+ P +K + G +P++A + DPA +Y VPEL LGRVFRS+ PVELTESETEYVVRCVKHIMD YVVL F ++NTI EQ L VTV +E ++P+LY E ++++P L G +V L PA FSCELKF+ ++VDP+TG +EGDE EGF E YPLE L I ADFMAKV+
Sbjct: 138 MNSSDDLYRANSIRVLARIIDSQMLGAIERYVKQAIVDRNSLVASSALVSGMFLMQVSPEVVRRWVNEVQEAVQSSSDMVQYHALCLLYQIKKNDRLAVSKMVTQLTRSSMSSPLGVCLLIRYISRILTDDLSAANMRTVMQ-----------FLELSLRHRSEIVIYEAAKAICALPDLENRDINPAVTVLQLFLSSPKATLRYAAMKCLSDVAMRQPAAIVKCNDDMEALISDSNRSIATLAITTLLKTGNEGSVDRLMKQISSFMTEIADEYKIVVVQAIRQLCLKYPQKHRVLVGFLASTLREEGGFDFKKSITDAIVDLIHTIPETK----ESSLFHLCEFIEDCEFTALSTQILHLIGSLGPKTLAPARYIRFIYNRVILENAVVRAAAISALARFAIEVAAIRHSVCVLLRRSLLDEDDEVRDRATIALNLLDSLPPVELNEDG---------EVVQGDGSGGASV----------LVEPLPMSFSALDRAVKLYASRGGTGDEQPMTLAALPVVEDTPVPAHASSKPGTQPGAVRTMATPASAASGGAXXXXXXXXXDPAAAVYAVPELAQLGRVFRSSAPVELTESETEYVVRCVKHIMDDYVVLQFDVTNTIAEQRLEEVTVGLEGNEPELYGDEEALSVPCATLVYSTPGSCFVALARNTEVPVVPAIFSCELKFRVVEVDPSTGEVEGDE--EGFAENYPLEDLEILPADFMAKVS 829
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: F0Y6T5_AURAN (Coatomer subunit gamma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6T5_AURAN) HSP 1 Score: 734 bits (1894), Expect = 1.170e-252 Identity = 424/739 (57.37%), Postives = 513/739 (69.42%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRI------------------IDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPEVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLSKSPMRSPLAVCLLIRYMSKILHDD----ISATNARAAYQASFPFLYRPGFFLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPA-TAGQPLVLSSLPVVEEVAAPTGIVAKGAGKDGRSGSPSAAEAAPDDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDP-DLYEVEASVALPELKCGDTGHSYVVLKLAEGNAAEPAA-FSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVT 2142
MNS EDL+RANSIRVL+++ IDATMLGAIERY+KQAIVDKN +V+SSALV+G L K SP+VVRRWVNEV E + S EMVQ+HALSLLY IK HD+LA+SK+V QL++ + SPLA CLLIRY++ I+ +S+ RAAYQ FLE SLRHRS+ V+YEAA+A+C+LPG E D+ PAI VLQ+FL+S KP L+ MR LS VA P +++KCN DME LI+D NRSIAT AITTLLKTGSE SVDRLMKQISSFMNEIADEFKIVVV AIR+LCLKYPLKHRVLVGFLA FLREEGGF+FKK+I D IV LM AIPETK E SLFHLC+FIEDCEFTALSTQIL LVG LGP+T APARYIRF+YNRVILENA VRAAAV AL KFAA+LP+LR S+ VL++RSL DEDDEVRDRAT AL LLG +GD LP LL+E LP+ F+ L +++K + A L +LP VE+ + PT + A +G A DD A +YK+PEL +LG VFRS P+ELTESETEYVV CVKH+MD ++VL+F I+NTI +Q+L + +V++E +P + Y + +SV P L CG T S++VL+ G+ AA F ELKF+ ++VDP TG +EGDE EGF EEYPLE + I+T DFMAK +
Sbjct: 140 MNSKEDLFRANSIRVLAKMCVIEILLRCFDFIKVCTRIDATMLGAIERYVKQAIVDKNCMVASSALVAGAHLMKGSPDVVRRWVNEVQEALHSPSEMVQFHALSLLYDIKQHDRLAISKMVAQLTRGTISSPLATCLLIRYITTIVRGSDGNVLSSATGRAAYQ-----------FLELSLRHRSEAVIYEAAKALCSLPGTEDRDIGPAIAVLQLFLSSPKPTLRLAAMRALSSVAIFKPAAVIKCNDDMESLIADGNRSIATFAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVTAIRELCLKYPLKHRVLVGFLANFLREEGGFDFKKSIVDAIVALMCAIPETK----ESSLFHLCEFIEDCEFTALSTQILHLVGILGPTTVAPARYIRFVYNRVILENATVRAAAVTALTKFAAQLPALRVSVSVLLRRSLRDEDDEVRDRATFALRLLGDYSVVSLAENDIDAETALSPLGNEGDT-----LP-----EIRLLVEPLPVPFTRLARSLKKFEMAQDQENADLVLNFETLPHVEDHSPPTQLQATAQSSVCPNG------ALLDDSAVELYKIPELAALGTVFRSTLPLELTESETEYVVSCVKHVMDEHIVLEFAITNTIADQLLVDTSVKLEPVEPIETYSIVSSVGAPSLHCGATARSWIVLRCCPGSRMGAAAHFMAELKFRVVEVDPGTGEIEGDE--EGFHEEYPLEDVEISTTDFMAKAS 845
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: F0YM71_AURAN (Coatomer subunit gamma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YM71_AURAN) HSP 1 Score: 712 bits (1839), Expect = 6.640e-245 Identity = 410/723 (56.71%), Postives = 508/723 (70.26%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPEVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLSKSPMRSPLAVCLLIRYMSKILH----DDISATNARAAYQASFPFLYRPGFFLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYH-QHMPATAGQPLVLSSLPVVEEVAAPTGIVAKGAGKDGRSGSPSAAEAAP--DDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDG-YVVLDFTISNTIEEQMLRNVTVEVEQSDPD-LYEVEASVALPELKCGDTGHSYVVLK--LAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAK 2136
MNS+EDL+RANSIRVL+++IDATMLGAIERY+KQAIVDKN++VS G L + SP+VVRRWVNEV E + S EMVQ+HALSLLY+IK HD+LA+SK+V QL++ + SP+A CLLIRY++ IL D +++ RAAYQ FLE SLRHRS+ V+YEAA+AI +LPGVE DL PA+ VLQ+FL+S K L+ MR L ++A P +++KCN DME LISD NRSIAT AITTLLKTGSE SVDRLMKQISSFMNEIADEFKIVVV AIR+LCLKYPLKHRVLVGFLA FLREEGGF+FKKAI D IV LM AIPETK E SL HLC+FIEDCEFTALSTQIL LVG LGP+ +APARYIRF+YNRVILENA VRAAAV AL KFAA+LP+LR S+ VL++RSL DEDDEVRDRAT+AL LLG + T +LLLE MSFS L A+ ++ H G L +++LPVV+++ G +S S + ++P +D A +YK+PE +LG+VFRS +P+ELTESETEYVV VKHIMD +V+L+F I+NTI +Q+L + + +E +D D +Y + S++ +L+CG T S++VL+ +E N A F ELKF+ L++DP T +EGDED GF EEYPLE + I+T DFM K
Sbjct: 137 MNSNEDLFRANSIRVLAKMIDATMLGAIERYVKQAIVDKNAMVSXXXXXXGAHLIRGSPDVVRRWVNEVQEALHSPSEMVQFHALSLLYEIKQHDRLAISKMVAQLTRGAISSPMATCLLIRYITAILKGSDVDMLASATGRAAYQ-----------FLELSLRHRSEAVIYEAAKAIVSLPGVEERDLGPAVAVLQLFLSSPKATLRLAAMRALCDIAIAKPAAVIKCNDDMESLISDSNRSIATFAITTLLKTGSESSVDRLMKQISSFMNEIADEFKIVVVTAIRELCLKYPLKHRVLVGFLANFLREEGGFDFKKAIVDAIVALMCAIPETK----ESSLLHLCEFIEDCEFTALSTQILHLVGSLGPTAAAPARYIRFVYNRVILENAVVRAAAVTALTKFAAQLPTLRASVSVLLRRSLRDEDDEVRDRATLALRLLGDDL-------------------------------VANTTEVNLLLEPFSMSFSRLGCALNKFNVAHGLEEEGLALNMTTLPVVDDM---------GPAASAQSASTAIHTSSPATEDVATELYKMPEFATLGKVFRSTSPIELTESETEYVVSVVKHIMDNDHVILEFLITNTIADQLLVDARITLESTDDDNVYTIVQSISAAKLRCGVTTRSWLVLRRNTSESNIFA-AQFVAELKFRVLEIDPNTAEIEGDED--GFAEEYPLEDVEISTNDFMGK 801
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: B5Y4T4_PHATC (Coatomer subunit gamma n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4T4_PHATC) HSP 1 Score: 708 bits (1827), Expect = 3.650e-243 Identity = 392/719 (54.52%), Postives = 501/719 (69.68%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPE---VVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLS-KSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQASFPFLYRPGF-FLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYH-QHMPATAGQPLVLSSLPVVEEVAAPTGIVAKGAGKDGRSGSPSAAEAAPDDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHSYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKV 2139
M DLYR N++RVL RI+DA MLGAIERY+KQAIVD + VSSSALVS L+ SPE VVRRW++E TE SS +EMVQ+HA+ LLYQIK+HD+L VSKLVTQ S ++ +RSPLA+ LL+RY SK+LHD++S A +YQ S + + G+ FLE+SLRH+S++V+YEAARA C+LP E DL PAI VLQ+FL+S KPA++F ++RTL++VA ++P + KCN D+E LI D NRSIATLAITTLLKTGSE S+DRL+KQIS+F+ EIADE+KI VV+++++LCL YP KHRVLVGFL+ FLREEGGF+FK++I + I+ L+ A+PE+ E SL HLC+FIEDCEFT LSTQIL L+GELGP TSAP RYIRFIYNRVILEN+AVRAAAV AL KFAA PSLR SI L++RSL+DEDDE RDRA +A+ L ++ GD +P A++LLE LPMSF LE+++KAY M + P+ + +LP+VE+ E A DPA IY +PEL +LGR FRS PV LTESETEYVV+C KHI +VVL F++ NTI++Q L NVTV ++ S+ +++ V +A +K GDT H + +L+ P+ F+CEL+F + VD TG EGD+ FEEEYPLE L IAT+DFMAKV
Sbjct: 123 MTCDVDLYRGNALRVLVRIVDAAMLGAIERYVKQAIVDSSGQVSSSALVSASHLFASSPECAAVVRRWISETTEATSSPNEMVQFHAMQLLYQIKSHDRLGVSKLVTQYSQRNTLRSPLALVLLVRYTSKLLHDEVSEGRASGSYQESTSTVVQAGYQFLEASLRHKSELVVYEAARACCHLPAAEPQDLQPAIGVLQLFLSSPKPAVRFASIRTLAQVANQHPRVVSKCNEDLEALIGDSNRSIATLAITTLLKTGSENSIDRLLKQISAFLTEIADEYKITVVRSLQKLCLTYPSKHRVLVGFLSNFLREEGGFDFKRSIVNSIISLIRAVPEST----ESSLLHLCEFIEDCEFTMLSTQILHLLGELGPKTSAPPRYIRFIYNRVILENSAVRAAAVSALTKFAASCPSLRTSILTLLQRSLVDEDDETRDRAAIAVATL-------QNAMEAFPYVAPPEDDVVGDE-LPPDVPDPDDPAAYVLLEPLPMSFDKLERSMKAYMLTPMTMESPDPITVMALPIVEDT-----------------------EVA--DPAAAIYAIPELANLGRAFRSTAPVHLTESETEYVVQCTKHIFASHVVLQFSVQNTIDDQRLDNVTVLLDDSESEIFTVSGEIACDGIKYGDTKHCFAILERNAEIQLTPSHFTCELRFTVVQVDSTTGEEEGDK----FEEEYPLEDLEIATSDFMAKV 800
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: A0A7S1C1K4_9STRA (Coatomer subunit gamma n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1K4_9STRA) HSP 1 Score: 704 bits (1818), Expect = 2.110e-241 Identity = 399/721 (55.34%), Postives = 503/721 (69.76%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPE---VVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLS-KSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQASFPFLYRPGF-FLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPATAG-QPLVLSSLPVVEEVAAP-TGIVAKGAGKDGRSGSPSAAEAA-PDDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHSYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKV 2139
M S DLYRAN+IRVL+RI+DA MLGAIERY+KQAIVD++ LV+++ALVS L+ SPE +VRRWV+E T+ S +EMVQYHA+ LLYQI+ HD+L VSKLVTQ S +S RSP+A LL+RY SK+L D+I+ + +Y+ G+ FLE SLRH+S++V+YEAARAIC++PG+E +DL+PAI+ LQ+ L S KPA++FG+M+ LS V+ +P + KCN D+E LI DPNRSIATLAITTLLKTGSE +VDRLMKQISSFM EI DE+KI VV +I+QLCL+YP KHRVLVGFL+ FLREEGGFEFKKAITD IV LM A PET E SLFHLC+FIEDCEFT LST+IL L+G +GP+TSAP RY+RF+YNRVILEN AVRAA+V ALAKFAA++PSLR SI L+ +SL DEDDE RDRA VAL ++ + D +P+ + ++LLLE LPMSF L ++K+Y A + +P+ LS+LP+VE V P GAG +A AA P DPA +Y VP+L +LGRVFRS V LTESETEYVV CVKHI + Y+VL F + NTI++Q L NVTV +E +PD++EV + + G+T + +V+L+ A P F+CEL F VDPA+G EGD + EEY LE L I T+DFMAKV
Sbjct: 134 MASDADLYRANAIRVLTRIVDAAMLGAIERYVKQAIVDQHPLVATAALVSATHLFSKSPECAAIVRRWVSETTKATESPYEMVQYHAMLLLYQIRMHDRLGVSKLVTQASQRSSTRSPMATVLLVRYTSKLLIDEIACGQGGSQ-------VYKTGYQFLEMSLRHKSELVVYEAARAICSMPGIEPSDLTPAISCLQLLLASPKPAVRFGSMKILSAVSQVHPRIVSKCNDDLEALIGDPNRSIATLAITTLLKTGSENAVDRLMKQISSFMAEINDEYKITVVNSIQQLCLQYPAKHRVLVGFLSNFLREEGGFEFKKAITDAIVHLMDAAPETT----ESSLFHLCEFIEDCEFTMLSTRILHLIGNIGPTTSAPGRYVRFVYNRVILENPAVRAASVSALAKFAAKVPSLRLSIVTLLNKSLSDEDDETRDRAAVALVIIEKSIEENPYVIPL-----------EDDENPAEDVPVPGDSASYLLLEPLPMSFDQLSLSIKSYMAAPHALSSPEPMTLSALPIVETVQDPLVDSKTTGAGPSAPLDGENAKNAAEPADPAAAVYAVPDLNALGRVFRSTKTVALTESETEYVVSCVKHIYEEYIVLQFKVQNTIDDQRLENVTVCMEVDNPDVFEVTGEIPAESIGYGETKNCFVLLQRKPNAALCPLNFNCELHFTVQQVDPASGESEGDT----YPEEYVLECLEILTSDFMAKV 828
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: A0A1Z5JGT2_FISSO (Coatomer subunit gamma n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGT2_FISSO) HSP 1 Score: 701 bits (1809), Expect = 5.790e-240 Identity = 386/722 (53.46%), Postives = 515/722 (71.33%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPE---VVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLS-KSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQASFPFLYRPGF-FLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPATAG--QPLVLSSLPVVEEVAAPTGIVAKGAGKDGRSGSPSAAEAAPD--DPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHSYVVLKLAEGNAAEPAAFSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKV 2139
M DLYR N++RVL RI+DA MLGAIERY+KQA+VD + VSSSALVS L+ SPE +V+RW++E TE S +EMVQ+HA+ LLYQIK++D+L VSKLVTQ S ++ +RSPLA+ LL+RY +K+LHD+++ +YQ + + + G+ FLE+SLRH+S++V+YEAARA+CNLP E DL+PAI+VLQ+FL+S KPA++F ++RTL+ VA +P + KCN D+E LI D NRSIATLAITTLLKTGSE S+DRL+KQIS+F+ EIADE+KI VV+++++LCL YP KHRVLVGFL+ FLREEGGF+FK++I + I+ L+ A+PE+ E SL HLC+FIEDCEFT LST+IL+L+GELGP+TSAPARYIRFIYNRVILEN+AVRAAAV ALA+FAA PSLR SI L+KRSL+DEDDE RDRA +A+++L E+ +G G P T A ++LE+LP+SF LE+++K Y P T +P+V+S+LPVVE+ A + + D + + S E + DPA +Y +PEL LGR FRS+ PV LTESETEYVV+C+KH+ ++VL FT+ NTIE+Q L NVT+ V+ SD +++ +A +K G+T + VL+ P++F+CEL+F VDPA+G GD FEEEYP+E L I+T+DFMAKV
Sbjct: 134 MTCDVDLYRGNALRVLVRIVDAAMLGAIERYVKQAVVDSSGQVSSSALVSATHLFMKSPECAALVKRWISETTEATQSPNEMVQFHAMQLLYQIKSNDRLGVSKLVTQYSQRNSLRSPLALVLLVRYTTKLLHDEVADGRHSGSYQEATSPVIKSGYAFLEASLRHKSELVVYEAARALCNLPAAEPQDLNPAISVLQLFLSSPKPAVRFASIRTLAAVANTHPRVVSKCNEDLEGLIGDSNRSIATLAITTLLKTGSENSIDRLLKQISAFLTEIADEYKITVVRSLQKLCLTYPAKHRVLVGFLSNFLREEGGFDFKRSIVNSIISLIRAVPEST----ESSLLHLCEFIEDCEFTMLSTRILNLLGELGPTTSAPARYIRFIYNRVILENSAVRAAAVSALARFAAACPSLRTSIMTLLKRSLVDEDDETRDRAALAVSIL--------EDAIEKFPYVAPAEDAEG-GEIPPDNPADDDTAAFVVLESLPISFDKLERSMKVY-MAAPDTMNNPEPIVISALPVVEDGPATSAATTETDDLD-IAATVSVEETVKEVVDPAAAVYAIPELAHLGRAFRSSLPVPLTESETEYVVQCIKHVFQQHIVLQFTVQNTIEDQRLDNVTLLVDDSDSEIFSASGEIACSGIKYGETKSCFTVLERNTEMPLSPSSFTCELRFTVCMVDPASGEELGD----SFEEEYPVEDLEISTSDFMAKV 836
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Match: A0A1E7EPM9_9STRA (Coatomer subunit gamma n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPM9_9STRA) HSP 1 Score: 689 bits (1777), Expect = 2.180e-235 Identity = 386/722 (53.46%), Postives = 496/722 (68.70%), Query Frame = 1
Query: 1 MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSGILLYKISPE---VVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVTQLS-KSPMRSPLAVCLLIRYMSKILHDDISATNARAAYQASFPFLYRPGFFLESSLRHRSDMVMYEAARAICNLPGVEMNDLSPAINVLQMFLTSVKPALKFGTMRTLSEVAAKYPMSILKCNSDMEVLISDPNRSIATLAITTLLKTGSEGSVDRLMKQISSFMNEIADEFKIVVVKAIRQLCLKYPLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAIPETKACFFEMSLFHLCDFIEDCEFTALSTQILSLVGELGPSTSAPARYIRFIYNRVILENAAVRAAAVPALAKFAARLPSLRPSIRVLIKRSLLDEDDEVRDRATVALTLLGXXXXXXXXXXXXXXXXXXXXEETKGDGPATAGLPLGKPTTAHLLLEALPMSFSSLEKAVKAYHQHMPATAGQPLVLSSLPVVEEVAAPTGIVAKGAGKDGRSGSPSAAEAAPDDPAEHIYKVPELESLGRVFRSATPVELTESETEYVVRCVKHIMDGYVVLDFTISNTIEEQMLRNVTVEVEQSDPDLYEVEASVALPELKCGDTGHSYVVLKLAEGNAAEPAA---FSCELKFQALDVDPATGLLEGDEDEEGFEEEYPLEQLNIATADFMAKVTT 2145
+NS DLYR N++RVL+RI+DA +LG+IER KQAIVD +SLVSSSALV+ LY + +VRRW+ E TE +S +EMVQ+HA+ LLYQIK HDKL V+KLV+Q S ++ ++SPLA+ LL+RY +K+L D+ + Q P + FLE+SLRH+++MV+YEAA AICNL GVE DLSPAI+VLQ+FL+S KPA ++ +MRTL+++A P + KCN D+E LI D NRSIATLAITTLLKTGSE S+DRL+KQIS+F+ EIADEFKI VV+++++LCL YP KHRVLVGF++ FLREEGGF+FKK+I I+ L+ +PET E SL HLC+FIEDCEFT LST+IL L+GELGPSTSAPARYIRFIYNRVILENAAVRAAAV +LAKFAA PSLR SI L+KRSL+DEDDE RDRA +++++L E+ D P +P+ T A++LLE LPMSF LE+++ AY + P + + LP+VE+ A + ++ DPA +Y +PEL +LGR FRSA PV LTESETEYVV+C KHI +VVL F + NTIEEQ L NVTV ++ S+ + +A +K G++ + + VL+ N EP F+CEL+F ++VDPATG EG FEEEYPLE L I T+DFMAKVTT
Sbjct: 133 VNSDADLYRGNAMRVLARIVDAAILGSIERSFKQAIVDSSSLVSSSALVAASFLYDSHADCAIIVRRWITEATEATNSSNEMVQFHAMQLLYQIKQHDKLGVTKLVSQYSTRNTLKSPLALVLLVRYTAKLLSDEAQTGRSTLIKQDGSPAAKQGYLFLEASLRHKNEMVVYEAAYAICNLSGVEPQDLSPAISVLQLFLSSPKPATRYASMRTLAQIANTQPRVVSKCNEDLEALIGDSNRSIATLAITTLLKTGSENSIDRLLKQISAFLTEIADEFKITVVRSLQKLCLTYPNKHRVLVGFMSNFLREEGGFDFKKSIVASIISLIRQVPETT----ESSLLHLCEFIEDCEFTRLSTEILHLLGELGPSTSAPARYIRFIYNRVILENAAVRAAAVSSLAKFAAHCPSLRSSIMTLLKRSLIDEDDETRDRAAISVSIL-------KDAMIANPYVAPTDEDEADDIPDD--VPVPGDTAAYVLLETLPMSFDKLERSMTAYI-NTPNNDNE-ITFDVLPIVEDTAEEIAVASEII-----------------DPASVVYAIPELANLGRAFRSAPPVMLTESETEYVVQCTKHIFQSHVVLHFNVQNTIEEQRLDNVTVLIDDSESTSFTASGEIACESIKYGESKNCFTVLE--RNNTDEPLTTNTFTCELRFTVVEVDPATGEEEGGT----FEEEYPLEDLEITTSDFMAKVTT 816 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1073.670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1073.670.1 >prot_Ecto-sp13_S_contig1073.670.1 ID=prot_Ecto-sp13_S_contig1073.670.1|Name=mRNA_Ecto-sp13_S_contig1073.670.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=720bp MNSSEDLYRANSIRVLSRIIDATMLGAIERYLKQAIVDKNSLVSSSALVSback to top mRNA from alignment at Ecto-sp13_S_contig1073:5358..18876+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1073.670.1 ID=mRNA_Ecto-sp13_S_contig1073.670.1|Name=mRNA_Ecto-sp13_S_contig1073.670.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=13519bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1073:5358..18876+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1073:5358..18876+ >mRNA_Ecto-sp13_S_contig1073.670.1 ID=mRNA_Ecto-sp13_S_contig1073.670.1|Name=mRNA_Ecto-sp13_S_contig1073.670.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2160bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1073:5358..18876+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |