mRNA_Ecto-sp13_S_contig10723.664.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: A0A6H5KR31_9PHAE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR31_9PHAE) HSP 1 Score: 339 bits (870), Expect = 2.190e-110 Identity = 160/162 (98.77%), Postives = 162/162 (100.00%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
P+VFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVK+LEALGSPSGKTKTAVTIKDCGEL
Sbjct: 68 PKVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 229
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: D7FHE4_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE4_ECTSI) HSP 1 Score: 335 bits (858), Expect = 2.500e-109 Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 1
Query: 7 VFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
VFFDIDAGGK+MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVK+LEALGSPSGKTKTAVTIKDCGEL
Sbjct: 21 VFFDIDAGGKEMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKKLEALGSPSGKTKTAVTIKDCGEL 180
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: A0A7S1D0F5_CYCTE (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0F5_CYCTE) HSP 1 Score: 263 bits (672), Expect = 5.510e-81 Identity = 121/162 (74.69%), Postives = 141/162 (87.04%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
P+VFFDI+AGG+++GRIT ELR+DVVP+TAENFR LCTGE G+KGS FHR+IPQFMCQGGDFT +GTGG+SIYGRTF DENF L H G GILSMANAGPNTNGSQFF+CTVD PWLDGKHVVFGSVVDG+DVV+++E+ GSP+G T + IKDCGE+
Sbjct: 53 PKVFFDIEAGGEEVGRITFELRSDVVPETAENFRALCTGENGF-GYKGSTFHRVIPQFMCQGGDFTNHNGTGGKSIYGRTFSDENFALKHEGKGILSMANAGPNTNGSQFFICTVDTPWLDGKHVVFGSVVDGIDVVEKVESYGSPNGATSKTIVIKDCGEI 213
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: A0A835YXI4_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXI4_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.540e-80 Identity = 124/161 (77.02%), Postives = 136/161 (84.47%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGE 483
P+VFFDID KD GRI ELR DVVPKT ENFR+LCT KGFKGS FHRIIPQFMCQGGDFT G+GTGGESIYGRTFPDENF+L HTG GILSMANAGP+TNGSQFF+CTV PWLD KHVVFGSVV+G DVVK++E +GSPSG+T VTI+DCGE
Sbjct: 55 PKVFFDIDIDNKDAGRIVFELRKDVVPKTVENFRELCT-RPKGKGFKGSSFHRIIPQFMCQGGDFTKGNGTGGESIYGRTFPDENFQLKHTGGGILSMANAGPDTNGSQFFICTVATPWLDNKHVVFGSVVEGGDVVKKMEGVGSPSGRTAKVVTIRDCGE 214
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: A0A067CG90_SAPPC (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CG90_SAPPC) HSP 1 Score: 258 bits (658), Expect = 2.760e-79 Identity = 123/168 (73.21%), Postives = 137/168 (81.55%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGE------GPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
P+VFFDI AGGK +GR+ +ELRAD VPKTAENFRQLCTGE G +KGSKFHRIIP FMCQGGDFTAG+GTGGESIYG F DE F L H GPGILSMANAGPNTNGSQFFL TVDCPWLD HVVFG VV+G+DV++++EA GSPSG T+ VTI DCGE+
Sbjct: 20 PKVFFDIGAGGKPVGRLVIELRADKVPKTAENFRQLCTGEAGVGKSGKALHYKGSKFHRIIPNFMCQGGDFTAGNGTGGESIYGEKFADEAFLLKHQGPGILSMANAGPNTNGSQFFLTTVDCPWLDKAHVVFGKVVEGLDVLEKMEATGSPSGATRMEVTIDDCGEI 187
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: E1Z6E6_CHLVA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Chlorella clade TaxID=2511126 RepID=E1Z6E6_CHLVA) HSP 1 Score: 256 bits (655), Expect = 4.330e-79 Identity = 121/168 (72.02%), Postives = 136/168 (80.95%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGE------GPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
P+VFFD+ AG +GRI +ELRADVVPKTAENFR LCTGE G FKGS FHR+IPQFMCQGGDFT G+GTGGESIYG F DENF+L HTG G+LSMANAGPNTNGSQFFLCTV PWLDGKHVVFG VV+G+DVVK++E+ GS SGKT +TI DCG+L
Sbjct: 4 PRVFFDVTAGSTPLGRIVMELRADVVPKTAENFRCLCTGEKGTGRSGKPLHFKGSTFHRVIPQFMCQGGDFTRGNGTGGESIYGEKFADENFQLKHTGAGVLSMANAGPNTNGSQFFLCTVSTPWLDGKHVVFGQVVEGLDVVKKVESYGSGSGKTSQTITIADCGQL 171
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: A0A7S3LEC0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEC0_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.080e-78 Identity = 119/162 (73.46%), Postives = 135/162 (83.33%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
P+VFFD++ GG+D+GRI ELRADVVPKTAENFRQLCTGE G+KGS FHR+IPQFMCQGGDFT +GTGG+SIYG F DENFEL H G GILSMANAGP TNGSQFF+CTVD PWLDG+HVVFG V DG+DVV ++EA+GS SG T V +KDCGEL
Sbjct: 39 PKVFFDMEVGGEDIGRIEFELRADVVPKTAENFRQLCTGEAGF-GYKGSPFHRVIPQFMCQGGDFTNRNGTGGKSIYGAKFEDENFELKHVGKGILSMANAGPGTNGSQFFICTVDTPWLDGRHVVFGKVTDGLDVVDKIEAVGSQSGATSKTVIVKDCGEL 199
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: A0A1Z3HTG9_9CYAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HTG9_9CYAN) HSP 1 Score: 255 bits (652), Expect = 1.290e-78 Identity = 124/168 (73.81%), Postives = 134/168 (79.76%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGE------GPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
PQVFFDI GG+ GRI +ELR DV P+TAENFR LCTGE G FKGS FHRIIP FMCQGGDFT G+GTGGESIYGRTF DENFEL HTGPGILSMANAGP TNGSQFFL TV PWLDGKHVVFG VV+GMDVVK++EA+GS SGK + V I DCG+L
Sbjct: 7 PQVFFDITIGGQPAGRIVIELRTDVTPQTAENFRALCTGEQGTGASGKPLHFKGSSFHRIIPDFMCQGGDFTRGNGTGGESIYGRTFADENFELKHTGPGILSMANAGPGTNGSQFFLTTVATPWLDGKHVVFGHVVEGMDVVKRMEAVGSSSGKPRQPVVIADCGQL 174
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: A0A8C5G9U8_9TELE (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5G9U8_9TELE) HSP 1 Score: 255 bits (651), Expect = 1.300e-78 Identity = 119/162 (73.46%), Postives = 135/162 (83.33%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
P+VFFDI AGG +GRI +ELRADVVPKTAENFR LCTGE G+KGS FHR+IP FMCQGGDFT +GTGG+SIYG F DENF+L HTGPGILSMANAGPNTNGSQFFLCTV WLDGKHVVFG VV+GMDVVK++E+ GS SGKT + + + DCG+L
Sbjct: 4 PRVFFDITAGGNAVGRIVMELRADVVPKTAENFRALCTGEKGF-GYKGSSFHRVIPDFMCQGGDFTNHNGTGGKSIYGEKFADENFQLKHTGPGILSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGQVVEGMDVVKKIESFGSSSGKTNSKIVVADCGQL 164
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Match: A0A812VDW2_9DINO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812VDW2_9DINO) HSP 1 Score: 257 bits (657), Expect = 1.440e-78 Identity = 125/168 (74.40%), Postives = 133/168 (79.17%), Query Frame = 1
Query: 1 PQVFFDIDAGGKDMGRITLELRADVVPKTAENFRQLCTGE------GPVKGFKGSKFHRIIPQFMCQGGDFTAGDGTGGESIYGRTFPDENFELSHTGPGILSMANAGPNTNGSQFFLCTVDCPWLDGKHVVFGSVVDGMDVVKQLEALGSPSGKTKTAVTIKDCGEL 486
P VFFD+ GG GRIT+ELRADV PKTAENFR LCTGE G FKGS FHR+IP FMCQGGDFTAG+GTGGESIYG F DENF L HTGPGILSMANAGPNTNGSQFFLCTV WLDGKHVVFGSV DGMDVVK++EA+GS SGKT V I DCG+L
Sbjct: 60 PVVFFDMSIGGTPAGRITMELRADVAPKTAENFRALCTGEKGTGKSGKPLHFKGSAFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFADENFTLKHTGPGILSMANAGPNTNGSQFFLCTVKTQWLDGKHVVFGSVTDGMDVVKKIEAVGSQSGKTSKPVVIADCGQL 227 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10723.664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10723.664.1 >prot_Ecto-sp13_S_contig10723.664.1 ID=prot_Ecto-sp13_S_contig10723.664.1|Name=mRNA_Ecto-sp13_S_contig10723.664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp MGRITLELRADVVPKTAENFRQLCTGEGPVKGFKGSKFHRIIPQFMCQGGback to top mRNA from alignment at Ecto-sp13_S_contig10723:1192..4991+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10723.664.1 ID=mRNA_Ecto-sp13_S_contig10723.664.1|Name=mRNA_Ecto-sp13_S_contig10723.664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3800bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10723:1192..4991+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10723:1192..4991+ >mRNA_Ecto-sp13_S_contig10723.664.1 ID=mRNA_Ecto-sp13_S_contig10723.664.1|Name=mRNA_Ecto-sp13_S_contig10723.664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=450bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10723:1192..4991+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |