mRNA_Ecto-sp13_S_contig10714.656.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: D7FVY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY1_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 2.220e-19 Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1
Query: 1 HACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDV 114
HACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDV
Sbjct: 344 HACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDV 381
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: Q8WPL1_OIKDI (Fibrillin-like protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=Q8WPL1_OIKDI) HSP 1 Score: 57.8 bits (138), Expect = 1.120e-8 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1
Query: 1 HACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDV 114
H C EA C+N +GGYECLCA+G+ GDG+T G C D+
Sbjct: 1609 HMCFNEATCNNFEGGYECLCADGFEGDGMTNGDNCTDI 1646
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: E4XDJ5_OIKDI (Oikosin 19 n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4XDJ5_OIKDI) HSP 1 Score: 55.5 bits (132), Expect = 7.360e-8 Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 1
Query: 1 HACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDV 114
H C +A C+N +G YECLCA+G+ GDGLT G C D+
Sbjct: 1050 HMCFSDATCNNFEGSYECLCADGFEGDGLTNGDNCTDI 1087
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: L8GSC1_ACACA (Calcium binding egf domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSC1_ACACA) HSP 1 Score: 50.8 bits (120), Expect = 3.160e-6 Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 1
Query: 1 HACSPEAECHNTDGGYECLCAEGYAGDGL 87
HACS AEC NT GGYEC+C EG+AGDG
Sbjct: 242 HACSENAECINTIGGYECVCKEGFAGDGF 270
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: A0A7M7PDJ2_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PDJ2_STRPU) HSP 1 Score: 50.1 bits (118), Expect = 5.920e-6 Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 1
Query: 7 CSPEAECHNTDGGYECLCAEGYAGDGLTTGQ 99
C P A+C NT+GGYEC C EGY GDG++ Q
Sbjct: 333 CDPNAQCDNTEGGYECECNEGYVGDGISCNQ 363
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: A0A830B2C7_9LAMI (Wall-associated receptor kinase 2 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830B2C7_9LAMI) HSP 1 Score: 48.5 bits (114), Expect = 2.080e-5 Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 1
Query: 16 EAECHNTDGGYECLCAEGYAGDGLTTGQGCV 108
E +C NT GG++C+C EGY+GDG T G+GC+
Sbjct: 308 EKKCVNTPGGFQCVCPEGYSGDGRTDGKGCI 338
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: A0A2N2JEN4_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 TaxID=2013741 RepID=A0A2N2JEN4_9DELT) HSP 1 Score: 47.4 bits (111), Expect = 5.290e-5 Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1
Query: 7 CSPEAECHNTDGGYECLCAEGYAGDG 84
C P A CHNT+GGY+C+C G+AGDG
Sbjct: 1857 CDPNATCHNTEGGYDCVCDAGFAGDG 1882
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: A0A0M3KDW6_ANISI (Dumpy (inferred by orthology to a D. melanogaster protein) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3KDW6_ANISI) HSP 1 Score: 47.4 bits (111), Expect = 5.340e-5 Identity = 20/36 (55.56%), Postives = 26/36 (72.22%), Query Frame = 1
Query: 7 CSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDV 114
CSP+A C NT+GGYEC+C +G+ GDG T C D+
Sbjct: 18 CSPDAYCVNTEGGYECVCRDGFMGDGET----CFDI 49
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Match: UPI00106A238F (protein kinase C-binding protein NELL2-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A238F) HSP 1 Score: 45.4 bits (106), Expect = 7.960e-5 Identity = 20/38 (52.63%), Postives = 23/38 (60.53%), Query Frame = 1
Query: 1 HACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDV 114
H C A C+NT G Y+CLC GY+GDG T C DV
Sbjct: 32 HDCDGNANCNNTPGSYQCLCINGYSGDGRT----CTDV 65 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10714.656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10714.656.1 >prot_Ecto-sp13_S_contig10714.656.1 ID=prot_Ecto-sp13_S_contig10714.656.1|Name=mRNA_Ecto-sp13_S_contig10714.656.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=38bp HACSPEAECHNTDGGYECLCAEGYAGDGLTTGQGCVDVback to top mRNA from alignment at Ecto-sp13_S_contig10714:1179..1292- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10714.656.1 ID=mRNA_Ecto-sp13_S_contig10714.656.1|Name=mRNA_Ecto-sp13_S_contig10714.656.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=114bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10714:1179..1292- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10714:1179..1292- >mRNA_Ecto-sp13_S_contig10714.656.1 ID=mRNA_Ecto-sp13_S_contig10714.656.1|Name=mRNA_Ecto-sp13_S_contig10714.656.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=114bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10714:1179..1292- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |