mRNA_Ecto-sp13_S_contig10708.648.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 441 bits (1135), Expect = 3.280e-148 Identity = 275/487 (56.47%), Postives = 316/487 (64.89%), Query Frame = 1
Query: 1 EDRRHIDGFEIAIFRIVQREATSEQWRQWLRVPLEHAAAKGHMDLFIRLMDAGANGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSAGARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSSPLDLAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXXDRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRANNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCDTPLLLAVEHQV-SMGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKENDPNDEEIEADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQIAN-----IRIGRVITSSNGCSAKVARVSGQDLGEHDEEKEDKTTVDCR 1443
EDR +DGFEI IF++VQR ATSEQW++WLR P EHAAA+G++D F RLMDAGAN AGWRGC+GRTLLGAAA+G++EKMVR L+AGA DVNVLFG +RE ALMI GADPNVRD SPL LAA AGHH +G LLL A VHAK XXXXXXXXXXX + V AAGA+ S+R N SPL+IAA RG A +VKA LD DS DAT+ G+ ALHYAAS+ GPVRDNGDAVRVLL AGADV+AK T+D CDT L LAV ++ S GTIRALLEGGAN+N TPLHVAC S VE+LLRWGAD+KLT +TPA V+ +++D +DEE+EAD+QRIR+MLAR PA RSWRRRGWLVLSRSCPTRVQIAN NG SAKVA+VSG+ DEE D VD R
Sbjct: 9 EDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQ------------------------ELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDP-CDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLR 454
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 8.340e-139 Identity = 294/483 (60.87%), Postives = 331/483 (68.53%), Query Frame = 1
Query: 1 EDRRHIDGFEIAIFRIVQREATSEQWRQWLRVPLEHAAAKGHMDLFIRLMDAGANGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSAGARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSSPLDLAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXXDRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRANNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCDTPLLLAVEH-QVSMGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKENDPNDEEIEADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQIAN-IRIGRVITSSNGCSAKVARVSGQDLGEHDEEKEDKTTVDCR 1443
EDR + GFEI IF++++REAT EQW++WLR PLEHAAA+G++DLF RLMDAGAN EAGWRGCHGRTLLGAAA G++EKM+R LL+AGA DVNVLFG + E ALHVAAARGA+ +ALMIAGADPNVRD G SP XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX G + CSPL+IAA RGHA ++KA LD SS D N+ G+ ALHY AS VRD GDAVRVLL AGADVN K T DS C TPL LAV S GTI ALLEGGAN+N TPLH+AC + VE+LLRWGADEKL N + +TPADV+G ++ND +DEE EAD+QRI +MLARAPADRSWRRRGWLVLSRSCPTRV IAN I+ NG SAKVARVSGQ DEE ED+ VD R
Sbjct: 9 EDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANC-GLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDS-CATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLR 489
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 384 bits (985), Expect = 1.140e-124 Identity = 282/487 (57.91%), Postives = 331/487 (67.97%), Query Frame = 1
Query: 1 EDRRHIDGFEIAIFRIVQREATSEQWRQWLRVPLEHAAAKGHMDLFIRLMDAGANGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSAGARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSSPLDLAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXXDRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRANNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCDTPLLLAVEHQV-SMGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKENDPNDEEIEADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQIANI-RIGRVI---TSSNGCSAKVARVSGQDLGEHDEEKEDKTTVDCRG 1446
+DR +DGFE+ IF++VQREATS+QW++WLR PLEHAAA G++ LF RLMDAGA+ EAGWRGC GRTLLGAAA KN+K++RALL+AGA+ DVNVLFGAKRE ALH+AAARGAE+ASKALMIAGA+PN+R XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX T+VKAFLD D+S +AT++ GYTALH+AA + RD GDAVRVLL AGADV+AK T+D PL +AV +V S GTIRALLEGGA+VNV TPLH AC S VA+VE+LLRWGADEKLT++ + TPAD++G + + +IEAD QRI QMLARAPADRSWRRR WLVLSRSCPTRV+IAN R G + +SSNG S K+AR SG+D G + E ED+ VD RG
Sbjct: 11 QDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLR-----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRG 492
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 366 bits (939), Expect = 2.790e-118 Identity = 272/490 (55.51%), Postives = 320/490 (65.31%), Query Frame = 1
Query: 1 EDRRHIDGFEIAIFRIVQREATSEQWRQWLRVPLEHAAAKGHMDLFIRLMDAGA-NGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSAGARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSSPLDLAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXXDRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRANNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCDTPLLLAVEHQV-SMGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKENDPNDEEIEADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQIAN--IRIGRVITSSNGCSAKVARVSGQDLGEHDEEKEDKTTVDCRGWWAG 1458
+ R +DGFEI IF++VQ E TSEQW+QWL+VPLEHAAA+G++DLF RLMDAG GE GWRGC+GRTLLGAAA+GK++K+VRALL AGA DVNVLFG + + ALHVAAARGAE+ASKALM+AGADPN+ D G XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX D ++ GYTA+H A + HGP+ DNG VR+LLEAG VNA+ D TPL AVE ++ S+ T ALLEGGAN N G++ TPLHVACM S VA+VE+LLRWGADE +N+N + PADV+G + D NDE+++ADH+RIR+MLARAPADRSWRRRGWLVLSRSCPTRVQIAN R+ R N C AKVARVSG+DLG +EE E++ TVD W G
Sbjct: 10 DGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNR-----NSCPAKVARVSGEDLGGDEEEAENQMTVD----WGG 483
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 341 bits (875), Expect = 5.370e-101 Identity = 247/482 (51.24%), Postives = 290/482 (60.17%), Query Frame = 1
Query: 1 EDRRHIDGFEIAIFRIVQREATSEQWRQWLRVPLEHAAAKGHMDLFIRLMDAGANGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSAGARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSSPLDLAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXXDRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRANNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCDTPLLLAVEHQVS-MGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKENDPNDEEIEADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQIANIRIGRVITSSNGCSAKVARVSGQDLGEHDEEKEDKTTVDCR 1443
EDR H+DGFE+ I +V+ ATSEQWRQWLR+PLEHAAAKG++DLF RLMDAG++GE GWRGC+GRTLLGA AYG++EKMVRALL AG D NV F A+ + ALHVAAAR DPN+ G L +AA GH I LLLKGA V AK T++G XXXXXXXXXXXXXXXXX T G N S L A GHAT+VKAFL+ D T++ YT LH AA + G V V VLLEAGADVNAK ++S TPL LAV+ +VS + TIRA E TPLHVAC S A V++LL WGAD +N N PADV+ E+ +DE IEADH+ +R+MLARAPAD+SWRR GWLVLSRS PTRVQI N R G SSN CS K+ARVSG+D D+E E++ VD R
Sbjct: 9 EDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAAR--------------DPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAK-TYSGDAPLXXXXXXXXXXXXXXXXXLGG------------AHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGHATIVKAFLETGIDV-DTTDDQAYTVLHRAADMDGCV------VHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGN-RGGS--GSSNSCSTKLARVSGKDS-SRDDELENQMMVDWR 452
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 313 bits (803), Expect = 3.340e-94 Identity = 226/511 (44.23%), Postives = 269/511 (52.64%), Query Frame = 1
Query: 1 EDRRHIDGFEIAIFRIVQREATSEQWRQWLRVPLEHAAAKGHMDLFIRLMDAGANGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSAGARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSS----PLD--------------LAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXXDRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRA---NNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCDTPLLLAVEHQV-SMGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKENDPNDEEIEADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQIAN--------IRIGRVITSSNGCSAKVARVSGQDLGEHDEEKEDKTTVDCR 1443
EDR +DGF+I IF++VQREATSEQW++WLR PLEHAAAK L A+G W +EKMVR LL+AGA D NVLFG + E ALHV ARGAE + +ALMIAGADP +RD G + +D +AA AGHH IGSLLL ADVHAK + E +LC + AAGA+ +R N S LD+AA RGHA ++ A LD D+ + +A SV GPV DNGDAVR LL GADVNAK T DS C +PL LAV+ ++ S G I PLH+AC S V VE+LLRWGADEKLTN +TPADV+ ++ D +D+E EAD QRI +M+A PADRSWRRRGWLVLSRSCPTRVQIAN NG +AKVARVSG+ DE E VD R
Sbjct: 9 EDRSRVDGFKIEIFKLVQREATSEQWKEWLRAPLEHAAAKELGSLHT------ADGH--W----------------SEKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRALMIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLH-----------------------LAASEGRALCLSELLLGANNHLEAVQELL-AAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN-------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTT-DSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVARVSGESSSRDDERTEGDMIVDLR 457
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 288 bits (737), Expect = 3.300e-89 Identity = 217/401 (54.11%), Postives = 251/401 (62.59%), Query Frame = 1
Query: 1 EDRRHIDGFEIAIFRIVQREATSEQWRQWLRVPLEHAAAKGHMDLFIRLMDAGANGEAGWRGC--HGRTLLGAAAYG-KNEKMVRALLSAGARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSSPLDLAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXX-DRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRANNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCD--TPLLLAVEHQV-SMGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKEND 1182
EDR +DGFEI IF++V+ EATS+QW+QWLR PLEHAAAKG++DLF RL+DAGA GE GW+G RTLLGAAA G K++ MV+ALL AG VN FGA RE ALHV ARGAE ASKALM+AGADPN+ + G SPL LAA AGHH IG LLL+ A + XXXXXXXXXXX D+DV D E XXXXXXXXXXXXXXXXXX RG+A M+KAFLD DS DAT+ G+TALHYAA V V DNGDAVR LLEAGADVN K ++ D TPL +AV ++ S+ I TPLHVACM V+ VE+LLRWGADE L N +TPAD +G W + D
Sbjct: 8 EDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVT----DGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPADEIGVWGDED 404
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 259 bits (661), Expect = 6.380e-76 Identity = 221/487 (45.38%), Postives = 273/487 (56.06%), Query Frame = 1
Query: 16 IDGFEIAIFRIVQREATSEQWRQWLRVPLEHAAAKGHMDLFIRLMDAGANGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSA-GARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSSPLDLAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXXDRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRANNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGY-TALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCD-TPLLLAVEHQVS-MGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEW------KENDPN--DEEIEADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQIANIRIGRVITSSNGCS-AKVARVSGQDLGEHDEEKEDKTTVD 1437
+DG E+ IF++V+ +ATS QWR+WLR PLEHAAA+G++DLF RLMDAGA+G AGWRGCHGRTLLGAAAYGKNE++V LL+ GA DVNV FG + E ALHVAA R + S+ L+IAGADPN+ D G SPL +AA GHH +G LL KG K T XXXXXXXXXXXXXX D + E XXXXXXXXXXXXXXXXXX A N+ + TALH AA P+ + E C TPL V ++S + T N E TPLH AC S A+V++LLRWGAD+ + + ET AD +G W E+D + D++++AD QR R +LA AP DR WRRRGWLVL RS PT+VQI + +SS+GCS AK ARVS +D GE +E D+ ++
Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLLRKGRADANKTTXXXXXXXXXXXXXXXXXTSCVSKLLLYGADT---DCGDRFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWNDEDWATALHCAAQGSRPLLEXXXXXXXXXXXXXXXXXXXXE---CVWTPLHRGVYSRLSSLDTXXXXXXXXXXXNAQAENTWTPLHYACYKSNAAAVDLLLRWGADDTIVDGEGETAADEVGTWDPEVHSNEDDGSIDDDKLKADGQRTRLILACAPVDRLWRRRGWLVLCRSYPTKVQI----LKDSSSSSSGCSTAKAARVSEEDSGECGDEDGDEARIE 541
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE) HSP 1 Score: 249 bits (635), Expect = 1.720e-74 Identity = 228/436 (52.29%), Postives = 258/436 (59.17%), Query Frame = 1
Query: 148 MDAGANGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSAGARRDVNVLFGAKREDALHVAAARGAEKASKALMIAGADPNVRDSGGSSPLDLAANAGHHHAIGSLLLKGADVHAKKTHAGXXXXXXXXXXXXXXXXXXXXXXXXDRDVVMIEMDSLCETXXXXXXXXXXXXXXXXXXAAGADGSIRANNHCSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCDTPLLLAVEHQV-SMGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKENDPNDEEIEADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQIANIRIGRVITSSNGCS---AKVARVSGQDLGEHDEEKEDKTTVDCR 1443
MDAGANG+AGWR C GRTLLGAAAYG +KMVR LLSAGA AARGA+ + +A M+AGADP++RD G SPL LAA A HH G LLLKG+DV AK + XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX + + +NN SPL++AA GH + ALH AA VRDNGDAVR LL AGADVN + T + C TPL LA H++ S GTIRALLEGGAN+N E + TPLH AC VA VE+LL WGADEKLTN+ +TPADV+G RSWRRRGWLVLSR C TRV IAN +SS+G AKVAR SG+D G DEE D+ VD R
Sbjct: 1 MDAGANGKAGWRECRGRTLLGAAAYG--DKMVRTLLSAGAT------------------AARGADDSCRAFMVAGADPSLRDRVGHSPLHLAAVARHHRVAGMLLLKGSDVVAKTAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----NHRMLSNNTRSPLEVAANGGHGNVA--------------------ALHCAAVFVVAVRDNGDAVRALLGAGADVNVEATNNI-CFTPLHLAACHRIASDGTIRALLEGGANINACTEDE-TPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPADVIG----------------------------TRSWRRRGWLVLSRYCQTRVNIANR------SSSSGXXXXXAKVARASGEDAGRRDEETADQMMVDLR 355
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 237 bits (605), Expect = 2.960e-71 Identity = 131/202 (64.85%), Postives = 153/202 (75.74%), Query Frame = 1
Query: 715 CSPLDIAARRGHATMVKAFLDADSSAFDATNNCGYTALHYAASVHGPVRDNGDAVRVLLEAGADVNAKITEDSNCDTPLLLAVE-HQVSMGTIRALLEGGANVNVPGEYKLTPLHVACMLSCVASVEILLRWGADEKLTNENEETPADVMGEWKENDPNDEEI-EADHQRIRQMLARAPADRSWRRRGWLVLSRSCPTRVQI 1314
CSPL+IAA GHA ++KA LD DSS D T+ G+ ALHYAA V GPVRDNGDAVRVLL AGADVN DS C TPL +AV +VS GT+RALLEGG+N++ TPLH+AC + V VE+LLRWGADEKLTN +TPADV+ ++ND +DEE EAD+QRIR+ML APADRSWRRRGWLVLSRSCPTRV+I
Sbjct: 84 CSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDS-CFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRSCPTRVEI 284 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10708.648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10708.648.1 >prot_Ecto-sp13_S_contig10708.648.1 ID=prot_Ecto-sp13_S_contig10708.648.1|Name=mRNA_Ecto-sp13_S_contig10708.648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=445bp MDLFIRLMDAGANGEAGWRGCHGRTLLGAAAYGKNEKMVRALLSAGARRDback to top mRNA from alignment at Ecto-sp13_S_contig10708:744..2283+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10708.648.1 ID=mRNA_Ecto-sp13_S_contig10708.648.1|Name=mRNA_Ecto-sp13_S_contig10708.648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1540bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10708:744..2283+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10708:744..2283+ >mRNA_Ecto-sp13_S_contig10708.648.1 ID=mRNA_Ecto-sp13_S_contig10708.648.1|Name=mRNA_Ecto-sp13_S_contig10708.648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1335bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10708:744..2283+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |