mRNA_Ecto-sp13_S_contig10694.635.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: A0A6H5JMS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS3_9PHAE) HSP 1 Score: 350 bits (898), Expect = 5.970e-114 Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 2
Query: 2 DNYMKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEISRVRAALPQP 532
DNYMKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGD SCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEI+RV+AALPQP
Sbjct: 49 DNYMKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDKSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEIARVKAALPQP 225
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: D8LN41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN41_ECTSI) HSP 1 Score: 335 bits (858), Expect = 6.570e-108 Identity = 174/209 (83.25%), Postives = 177/209 (84.69%), Query Frame = 2
Query: 2 DNYMKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEISRVRAALPQPXXXXXXXXXXXXXXXXXXXVAPQRAEVKQHVV 628
DNYMKGQAAVNTTRDYIRAALFFANTAILL TFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINT+KIAGAPMPQSLMVKVFNHAHQYYSLGIRL+FGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEI+R RAEVKQHVV
Sbjct: 57 DNYMKGQAAVNTTRDYIRAALFFANTAILLATFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTRKIAGAPMPQSLMVKVFNHAHQYYSLGIRLYFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEIAR-------------------------------RAEVKQHVV 234
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: D8LN36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN36_ECTSI) HSP 1 Score: 266 bits (681), Expect = 3.910e-81 Identity = 127/178 (71.35%), Postives = 151/178 (84.83%), Query Frame = 2
Query: 2 DNYMKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEIS-RVRAALPQP 532
D +MKG AA NTTRDYI++A+F ANTAI L TF VGYAGSIYTDCSD D C+ +DWLFVIKLG L+A+L+ FFV TQCTR+AVHFSFCINT++I G PM +++V VF H+H+Y+SLGIRL+FGTIPVFAWIFT WALLAVTPVY YMVRGLENAGFV+DE+D+++ R RA LP P
Sbjct: 55 DQFMKGTAACNTTRDYIKSAVFMANTAITLATFAVGYAGSIYTDCSDDDDDCTPEDWLFVIKLGCLSAVLLVNFFVLTQCTRFAVHFSFCINTREIEGVPMSHAMLVNVFEHSHKYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVKDEMDQMTGRKRATLPPP 232
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: A0A835Z3S4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S4_9STRA) HSP 1 Score: 209 bits (533), Expect = 1.430e-59 Identity = 91/164 (55.49%), Postives = 127/164 (77.44%), Query Frame = 2
Query: 2 DNYMKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDEL 493
+NY+KGQ AVNTTRDY+R +LFF NTAIL+ F G+A + Y CSD + C+++D +IK+G + AL+++IFF+FTQC+R+ +HFSF INT+ + G P+P+ L +VFNHAH YY +GIR++F TIPVFAW+FT W LLAVTP+Y Y++ GLE++ F+ EL
Sbjct: 47 ENYLKGQQAVNTTRDYVRVSLFFGNTAILIANFAAGFAATRYATCSDAEGGCTSNDIQLMIKIGCIVALMLSIFFLFTQCSRFIIHFSFMINTRDVNGVPLPKELTNRVFNHAHDYYGIGIRMYFMTIPVFAWVFTEWCLLAVTPIYLYIIHGLESSSFMTKEL 210
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: A0A835ZEB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB1_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.160e-49 Identity = 85/164 (51.83%), Postives = 117/164 (71.34%), Query Frame = 2
Query: 11 MKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEI 502
+ GQ AVNTTRDYIR A ++I++ FV G A + DC++ T C+ + L ++KLG L L+ TIFF+FTQC R+A+HFSF INT+++ P+P SLM +VF+HAH YYS+GIR FF TIPV +W+FTSW LL VTPVY +V G+E++ F+ + L E+
Sbjct: 47 LTGQQAVNTTRDYIRVASALGGSSIIIAIFVAGVASGHFADCANSGTGCTQAEVLVLVKLGTLVGLMCTIFFLFTQCARFAIHFSFMINTREMNSVPLPPSLMTRVFDHAHWYYSVGIRAFFVTIPVVSWLFTSWCLLGVTPVYLLVVHGIESSAFMSEPLLEL 210
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: A0A7S3Y5F8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5F8_HETAK) HSP 1 Score: 71.6 bits (174), Expect = 8.450e-12 Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 2
Query: 317 MVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDE 499
MVKVF AH YYS+GIRL+F +P+FAW+F+ WALL T ++ ++ LE A F+QD + E
Sbjct: 1 MVKVFERAHMYYSIGIRLYFLAVPLFAWLFSRWALLGATVIHLTIIYELERAQFLQDLVKE 61
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: A0A6H5K746_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K746_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 3.060e-7 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 2
Query: 11 MKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSI 124
MKG AA NTTRDYI++A+F ANTAI L TF VGYAG +
Sbjct: 1 MKGTAACNTTRDYIKSAVFMANTAITLATFAVGYAGEV 38
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: A0A0J8FKJ4_BETVV (Uncharacterized protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8FKJ4_BETVV) HSP 1 Score: 56.6 bits (135), Expect = 3.120e-5 Identity = 40/129 (31.01%), Postives = 61/129 (47.29%), Query Frame = 2
Query: 26 AVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINT--KKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIF 406
AV T R+ I A+ A+TAI+L++ + S T G A F +K + + F + Q RY H S IN KKI+ +P + + N ++SLG+R F+ + P+F WIF
Sbjct: 62 AVQTLRNNIMASTLLASTAIMLSSVIAVLMTSRGTSNMFGLVLGDASQMGFSVKFFSILVCFLLAFLLNVQSIRYYSHASILINVPLKKISSPYLPADYVGSIVNRGGYFWSLGLRAFYFSFPLFLWIF 190
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: UPI001C533068 (uncharacterized protein LOC122060019 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C533068) HSP 1 Score: 55.8 bits (133), Expect = 5.000e-5 Identity = 46/166 (27.71%), Postives = 80/166 (48.19%), Query Frame = 2
Query: 17 GQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINT--KKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLE---NAGFVQDELDE 499
G AV T R+ I A+ A+TAI+L++ + + S+ ++ ++ L +L LM F QC RY H S IN KK++ + + + + N ++SLG+R F+ ++P+F W+F + V +M+ L+ + G V DE +E
Sbjct: 60 GILAVQTLRNNIMASTVLASTAIMLSSVLSIIMANSKARPSEIVLGAESELGFWIKFLSILVCFLMAFLFNI-QCIRYYSHASMLINVPVKKMSSSHLRAEYVKRTVNRGSCFWSLGLRAFYFSLPLFFWLFGPIPMFLCCVVLVFMLYFLDVTFDYGGVVDEEEE 224
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Match: A0A3D5AU69_9GAMM (DUF599 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5AU69_9GAMM) HSP 1 Score: 55.5 bits (132), Expect = 6.570e-5 Identity = 41/146 (28.08%), Postives = 68/146 (46.58%), Query Frame = 2
Query: 26 AVNTTRDYIRAALFFANTAILLTTFVVGY---AGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIF-TSWALLAVTPVYAYM 451
AV T R+ AA A+TA++L ++ A I +T S + +++ KL +L FF F+ R H + IN + +VKV A QYYS+G+R ++ ++P+ W+F +W L A + A +
Sbjct: 70 AVQTFRNSTMAATLLASTAVILILAILNMLAGADKISLALHQINTWGSREPGMWIFKLMLLVVDFFVAFFAFSLAVRGYHHAGYLINVPLEGDHGVTPETVVKVLTRASQYYSVGMRTYYLSVPLTLWLFGPTWMLFATVALLAVL 215 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10694.635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10694.635.1 >prot_Ecto-sp13_S_contig10694.635.1 ID=prot_Ecto-sp13_S_contig10694.635.1|Name=mRNA_Ecto-sp13_S_contig10694.635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp MKGQAAVNTTRDYIRAALFFANTAILLTTFVVGYAGSIYTDCSDGDTSCSback to top mRNA from alignment at Ecto-sp13_S_contig10694:863..4974- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10694.635.1 ID=mRNA_Ecto-sp13_S_contig10694.635.1|Name=mRNA_Ecto-sp13_S_contig10694.635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4112bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10694:863..4974- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10694:863..4974- >mRNA_Ecto-sp13_S_contig10694.635.1 ID=mRNA_Ecto-sp13_S_contig10694.635.1|Name=mRNA_Ecto-sp13_S_contig10694.635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10694:863..4974- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |